Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1640
(620 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical pr... 153 7e-38
U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin iso... 149 2e-36
U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin pro... 145 3e-35
U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin pro... 145 3e-35
U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1 p... 86 2e-17
AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical ... 86 2e-17
Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical pr... 84 7e-17
U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin iso... 83 2e-16
AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical ... 83 2e-16
Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical pr... 81 8e-16
U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin iso... 81 8e-16
AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical ... 81 8e-16
U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin pro... 79 3e-15
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 77 1e-14
U34354-1|AAC47127.1| 171|Caenorhabditis elegans cyclophilin iso... 76 2e-14
Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical pr... 65 3e-11
Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical p... 65 3e-11
U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin iso... 65 3e-11
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 65 3e-11
U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin fam... 65 3e-11
U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin iso... 65 3e-11
U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin iso... 65 3e-11
U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin pro... 59 2e-09
AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical ... 53 1e-07
U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical... 48 4e-06
AF393636-1|AAM19304.1| 222|Caenorhabditis elegans cyclophilin-1... 48 4e-06
Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin iso... 43 2e-04
AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin M... 43 2e-04
U34954-1|AAC47114.1| 147|Caenorhabditis elegans cyclophilin iso... 42 3e-04
U23453-6|AAC46758.1| 147|Caenorhabditis elegans Cyclophylin pro... 42 3e-04
U23453-5|AAK68671.1| 161|Caenorhabditis elegans Cyclophylin pro... 42 3e-04
AC006720-2|AAF60445.3| 262|Caenorhabditis elegans Hypothetical ... 29 3.5
AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical ... 28 4.7
U28943-7|AAK68294.1| 315|Caenorhabditis elegans Serpentine rece... 28 6.2
Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical pr... 27 8.2
U22833-4|AAA64324.2| 181|Caenorhabditis elegans Hypothetical pr... 27 8.2
>Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical
protein F31C3.1 protein.
Length = 204
Score = 153 bits (372), Expect = 7e-38
Identities = 76/123 (61%), Positives = 87/123 (70%)
Frame = +3
Query: 252 MGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTE 431
M +L + +L A A+ D+ KGPKVT KV FDM+IG IG IVIGLFGKTVPKT
Sbjct: 1 MKSLLVVAAVLAVGALAQGDDA-KGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTAT 59
Query: 432 NFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYG 611
NF +LA+KP+GEGY GSKFHRVI +FMIQ RSIYGE+F DENFKLKHYG
Sbjct: 60 NFIELAKKPKGEGYPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYG 119
Query: 612 AGW 620
AGW
Sbjct: 120 AGW 122
>U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin
isoform 5 protein.
Length = 204
Score = 149 bits (361), Expect = 2e-36
Identities = 70/100 (70%), Positives = 76/100 (76%)
Frame = +3
Query: 321 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 500
KGPKVT KV FDM+IG IG IVIGLFGKTVPKT NF +LA+KP+GEGY GSKFHRVI
Sbjct: 23 KGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEGYPGSKFHRVI 82
Query: 501 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGW 620
+FMIQ RSIYGE+F DENFKLKHYGAGW
Sbjct: 83 ADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGAGW 122
>U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin
protein.
Length = 201
Score = 145 bits (351), Expect = 3e-35
Identities = 72/120 (60%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
Frame = +3
Query: 267 MALGILLFIAS--AKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFF 440
M+ +L F+ + A S E +GP+VT KV FDM+IG +G IVIGLFG+ VPKT +NF
Sbjct: 1 MSRALLFFVLAILALSAEA-RGPRVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFV 59
Query: 441 QLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGW 620
+LAQ+ EGEGY GSKFHRVI+NFMIQ RSIYGERFEDENFKL+HYG GW
Sbjct: 60 ELAQRAEGEGYVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGW 119
>U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin
protein 6 protein.
Length = 201
Score = 145 bits (351), Expect = 3e-35
Identities = 72/120 (60%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
Frame = +3
Query: 267 MALGILLFIAS--AKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFF 440
M+ +L F+ + A S E +GP+VT KV FDM+IG +G IVIGLFG+ VPKT +NF
Sbjct: 1 MSRALLFFVLAILALSAEA-RGPRVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFV 59
Query: 441 QLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGW 620
+LAQ+ EGEGY GSKFHRVI+NFMIQ RSIYGERFEDENFKL+HYG GW
Sbjct: 60 ELAQRAEGEGYVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGW 119
>U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1
protein.
Length = 192
Score = 85.8 bits (203), Expect = 2e-17
Identities = 45/99 (45%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 500
KV FD+ IG++ G + + LF VPKT ENF L +G G +KGSKFHR+I
Sbjct: 23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRII 82
Query: 501 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
FMIQ SIYG +F+DENF LKH G G
Sbjct: 83 PEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPG 121
>AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical
protein Y49A3A.5 protein.
Length = 192
Score = 85.8 bits (203), Expect = 2e-17
Identities = 45/99 (45%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 500
KV FD+ IG++ G + + LF VPKT ENF L +G G +KGSKFHR+I
Sbjct: 23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRII 82
Query: 501 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
FMIQ SIYG +F+DENF LKH G G
Sbjct: 83 PEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPG 121
>Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical
protein ZK520.5 protein.
Length = 172
Score = 84.2 bits (199), Expect = 7e-17
Identities = 46/99 (46%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 500
KV FD+ IG G IV+ L+ VPKT ENF L +G+G +KGSKFHR+I
Sbjct: 5 KVFFDITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRII 64
Query: 501 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
FMIQ SI+GE+F+DENFK KH G G
Sbjct: 65 PEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPG 103
>U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin
isoform 3 protein.
Length = 173
Score = 82.6 bits (195), Expect = 2e-16
Identities = 47/99 (47%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 500
KV FD+ IG G IV+ L+ VPKT NF L G G +KGSKFHR+I
Sbjct: 5 KVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRII 64
Query: 501 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
NFMIQ SIYGE+F DENFK KH G G
Sbjct: 65 PNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPG 103
>AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical
protein Y75B12B.5 protein.
Length = 173
Score = 82.6 bits (195), Expect = 2e-16
Identities = 47/99 (47%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 500
KV FD+ IG G IV+ L+ VPKT NF L G G +KGSKFHR+I
Sbjct: 5 KVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRII 64
Query: 501 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
NFMIQ SIYGE+F DENFK KH G G
Sbjct: 65 PNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPG 103
>Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical
protein T01B7.4 protein.
Length = 183
Score = 80.6 bits (190), Expect = 8e-16
Identities = 45/96 (46%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Frame = +3
Query: 345 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQ---KPEG--EGYKGSKFHRVIKNF 509
V ++ G IGTIVI LF P+T ENF Q K +G GYK FHRVIK+F
Sbjct: 19 VFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTFHRVIKDF 78
Query: 510 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
MIQ SIYG +F DENF+LKH G G
Sbjct: 79 MIQGGDFCNGDGTGLMSIYGSKFRDENFELKHIGPG 114
>U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin
isoform 11 (CYP-11) protein.
Length = 183
Score = 80.6 bits (190), Expect = 8e-16
Identities = 45/96 (46%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Frame = +3
Query: 345 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQ---KPEG--EGYKGSKFHRVIKNF 509
V ++ G IGTIVI LF P+T ENF Q K +G GYK FHRVIK+F
Sbjct: 19 VFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTFHRVIKDF 78
Query: 510 MIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
MIQ SIYG +F DENF+LKH G G
Sbjct: 79 MIQGGDFCNGDGTGLMSIYGSKFRDENFELKHIGPG 114
>AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical
protein Y75B12B.2 protein.
Length = 171
Score = 80.6 bits (190), Expect = 8e-16
Identities = 45/99 (45%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 500
+V FD+ I G IV+ L+ VPKT ENF L +G G +KGSKFHR+I
Sbjct: 5 RVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRII 64
Query: 501 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
FMIQ SIYGE+F DENFK KH G G
Sbjct: 65 PEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPG 103
>U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin
protein.
Length = 171
Score = 78.6 bits (185), Expect = 3e-15
Identities = 44/99 (44%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 500
+V FD+ G IV+ L+ VPKT ENF L +G G +KGSKFHR+I
Sbjct: 5 RVFFDITTAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRII 64
Query: 501 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
FMIQ SIYGE+F DENFK KH G G
Sbjct: 65 PEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPG 103
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 76.6 bits (180), Expect = 1e-14
Identities = 40/88 (45%), Positives = 49/88 (55%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQX 521
+V +KIG IG IVI L PKT ENF L G GY+GS FHR+I FM+Q
Sbjct: 140 RVYLGVKIGIRYIGRIVIELRTDVTPKTAENFRCLCTGERGFGYEGSIFHRIIPKFMLQG 199
Query: 522 XXXXXXXXXXXRSIYGERFEDENFKLKH 605
+SIYG +F+DENF L+H
Sbjct: 200 GDFTKGDGTGGKSIYGTKFDDENFTLRH 227
>U34354-1|AAC47127.1| 171|Caenorhabditis elegans cyclophilin
isoform 2 (cyp-2) protein.
Length = 171
Score = 76.2 bits (179), Expect = 2e-14
Identities = 44/99 (44%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 500
KV D+ IG G IV+ L+ PKT ENF L +G+G +KGSKFHR+I
Sbjct: 5 KVFIDITIGGKKGGRIVMELYNDIAPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRII 64
Query: 501 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAG 617
FMIQ SI+GE+F+DENFK KH G G
Sbjct: 65 PEFMIQ-GGDFTEGNGTGESIHGEKFDDENFKEKHTGPG 102
>Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 65.3 bits (152), Expect = 3e-11
Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA-----QKPEGEG---YKGSKFHRV 497
+V D+ + ++ IG I I LF + PKT ENF L P + YK ++FHR+
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRI 65
Query: 498 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 605
+K FMIQ SIYG F+DE FKLKH
Sbjct: 66 VKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKH 101
>Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 65.3 bits (152), Expect = 3e-11
Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA-----QKPEGEG---YKGSKFHRV 497
+V D+ + ++ IG I I LF + PKT ENF L P + YK ++FHR+
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRI 65
Query: 498 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 605
+K FMIQ SIYG F+DE FKLKH
Sbjct: 66 VKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKH 101
>U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 65.3 bits (152), Expect = 3e-11
Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA-----QKPEGEG---YKGSKFHRV 497
+V D+ + ++ IG I I LF + PKT ENF L P + YK ++FHR+
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRI 65
Query: 498 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 605
+K FMIQ SIYG F+DE FKLKH
Sbjct: 66 VKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKH 101
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 65.3 bits (152), Expect = 3e-11
Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Frame = +3
Query: 315 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE------GYK 476
+P + + FD+ I + G IV L+ P+T ENF G+ Y+
Sbjct: 1 MPPEVRGNKRAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQ 60
Query: 477 GSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 605
GS FHRVIK FMIQ SIYG F+DEN LKH
Sbjct: 61 GSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKH 103
>U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin family
protein 8, isoforma protein.
Length = 466
Score = 65.3 bits (152), Expect = 3e-11
Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Frame = +3
Query: 315 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE------GYK 476
+P + + FD+ I + G IV L+ P+T ENF G+ Y+
Sbjct: 1 MPPEVRGNKRAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQ 60
Query: 477 GSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 605
GS FHRVIK FMIQ SIYG F+DEN LKH
Sbjct: 61 GSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKH 103
>U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 65.3 bits (152), Expect = 3e-11
Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA-----QKPEGEG---YKGSKFHRV 497
+V D+ + ++ IG I I LF + PKT ENF L P + YK ++FHR+
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRI 65
Query: 498 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 605
+K FMIQ SIYG F+DE FKLKH
Sbjct: 66 VKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKH 101
>U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin
isoform 8 protein.
Length = 466
Score = 65.3 bits (152), Expect = 3e-11
Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Frame = +3
Query: 315 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE------GYK 476
+P + + FD+ I + G IV L+ P+T ENF G+ Y+
Sbjct: 1 MPPEVRGNKRAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQ 60
Query: 477 GSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKH 605
GS FHRVIK FMIQ SIYG F+DEN LKH
Sbjct: 61 GSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKH 103
>U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin
protein 12 protein.
Length = 169
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +3
Query: 369 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 548
D +G I + L+ P+T +NF QLA++ Y G+ FHR+I +FMIQ
Sbjct: 15 DTTMGKIALELYWNHAPRTCQNFSQLAKR---NYYNGTIFHRIIADFMIQ-GGDPTGTGR 70
Query: 549 XXRSIYGERFEDE-NFKLKHYGAG 617
SIYG++F DE + +LKH GAG
Sbjct: 71 GGASIYGDKFSDEIDERLKHTGAG 94
>AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical
protein Y87G2A.6 protein.
Length = 629
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/78 (43%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 375 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 554
+ G I I LFG PKT ENF +++ Y G FHRVIK+FMIQ
Sbjct: 481 SFGDITIRLFGDECPKTVENFCTHSRRGY---YNGLTFHRVIKSFMIQ-TGDPSGKGTGG 536
Query: 555 RSIYGERFEDE-NFKLKH 605
SI+GE FEDE + +L+H
Sbjct: 537 ESIWGEDFEDEFHPRLRH 554
>U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical
protein T22F3.12 protein.
Length = 174
Score = 50.0 bits (114), Expect = 1e-06
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +3
Query: 342 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMI-- 515
KV D+ +G +V L + PKT ENF +L P G GYK F+RVI F
Sbjct: 4 KVFMDITADGAPLGKLVFELNTEKCPKTCENFVKLCTGPPGFGYKNCVFYRVIPTFCACS 63
Query: 516 QXXXXXXXXXXXXRSIYGER-FEDENFKLKH 605
+S +G + F+DENF++ H
Sbjct: 64 GDFETQNARRDGGKSTFGTKYFDDENFEILH 94
>AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical
protein Y17G7B.9 protein.
Length = 483
Score = 48.4 bits (110), Expect = 4e-06
Identities = 33/94 (35%), Positives = 46/94 (48%)
Frame = +3
Query: 306 SDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSK 485
S++ P T KV+ + GD I I L+ K P NF QL + YKG+
Sbjct: 2 SNQYINEPITTGKVTLETTAGD-----IEIELWTKEAPLACRNFIQLCME---NYYKGTV 53
Query: 486 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE 587
FHR++KNF++Q SIYG+ F+DE
Sbjct: 54 FHRLVKNFILQ-GGDPTATGTGGESIYGKPFKDE 86
>AF393636-1|AAM19304.1| 222|Caenorhabditis elegans cyclophilin-16
protein.
Length = 222
Score = 48.4 bits (110), Expect = 4e-06
Identities = 33/94 (35%), Positives = 46/94 (48%)
Frame = +3
Query: 306 SDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSK 485
S++ P T KV+ + GD I I L+ K P NF QL + YKG+
Sbjct: 2 SNQYINEPITTGKVTLETTAGD-----IEIELWTKEAPLACRNFIQLCME---NYYKGTV 53
Query: 486 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE 587
FHR++KNF++Q SIYG+ F+DE
Sbjct: 54 FHRLVKNFILQ-GGDPTATGTGGESIYGKPFKDE 86
>Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/71 (38%), Positives = 35/71 (49%)
Frame = +3
Query: 375 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 554
N G + + LF VPK ENF + G Y +KFHR+IKNFM+Q
Sbjct: 287 NFGPLNLELFAPKVPKACENF--ITHCSNGY-YNNTKFHRLIKNFMLQ-GGDPTGTGHGG 342
Query: 555 RSIYGERFEDE 587
SI+ + F DE
Sbjct: 343 ESIWDKPFSDE 353
>Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/71 (38%), Positives = 35/71 (49%)
Frame = +3
Query: 375 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 554
N G + + LF VPK ENF + G Y +KFHR+IKNFM+Q
Sbjct: 287 NFGPLNLELFAPKVPKACENF--ITHCSNGY-YNNTKFHRLIKNFMLQ-GGDPTGTGHGG 342
Query: 555 RSIYGERFEDE 587
SI+ + F DE
Sbjct: 343 ESIWDKPFSDE 353
>U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin
isoform 4 protein.
Length = 523
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/71 (38%), Positives = 35/71 (49%)
Frame = +3
Query: 375 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 554
N G + + LF VPK ENF + G Y +KFHR+IKNFM+Q
Sbjct: 287 NFGPLNLELFAPKVPKACENF--ITHCSNGY-YNNTKFHRLIKNFMLQ-GGDPTGTGHGG 342
Query: 555 RSIYGERFEDE 587
SI+ + F DE
Sbjct: 343 ESIWDKPFSDE 353
>AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin
MOG-6 protein.
Length = 523
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/71 (38%), Positives = 35/71 (49%)
Frame = +3
Query: 375 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 554
N G + + LF VPK ENF + G Y +KFHR+IKNFM+Q
Sbjct: 287 NFGPLNLELFAPKVPKACENF--ITHCSNGY-YNNTKFHRLIKNFMLQ-GGDPTGTGHGG 342
Query: 555 RSIYGERFEDE 587
SI+ + F DE
Sbjct: 343 ESIWDKPFSDE 353
>U34954-1|AAC47114.1| 147|Caenorhabditis elegans cyclophilin
isoform 10 protein.
Length = 147
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/80 (38%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 381 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 560
G I I L+ PK ENF L + Y G FHR IK+FM+Q S
Sbjct: 10 GDIKIELYVDDAPKACENFLALCAS---DYYNGCIFHRNIKDFMVQ-TGDPTHSGKGGES 65
Query: 561 IYGERFEDENFK-LKHYGAG 617
I+G FEDE LKH G
Sbjct: 66 IWGGPFEDEFVSALKHDSRG 85
>U23453-6|AAC46758.1| 147|Caenorhabditis elegans Cyclophylin
protein 10, isoform a protein.
Length = 147
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/80 (38%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 381 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 560
G I I L+ PK ENF L + Y G FHR IK+FM+Q S
Sbjct: 10 GDIKIELYVDDAPKACENFLALCAS---DYYNGCIFHRNIKDFMVQ-TGDPTHSGKGGES 65
Query: 561 IYGERFEDENFK-LKHYGAG 617
I+G FEDE LKH G
Sbjct: 66 IWGGPFEDEFVSALKHDSRG 85
>U23453-5|AAK68671.1| 161|Caenorhabditis elegans Cyclophylin
protein 10, isoform b protein.
Length = 161
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/80 (38%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 381 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 560
G I I L+ PK ENF L + Y G FHR IK+FM+Q S
Sbjct: 10 GDIKIELYVDDAPKACENFLALCAS---DYYNGCIFHRNIKDFMVQ-TGDPTHSGKGGES 65
Query: 561 IYGERFEDENFK-LKHYGAG 617
I+G FEDE LKH G
Sbjct: 66 IWGGPFEDEFVSALKHDSRG 85
>AC006720-2|AAF60445.3| 262|Caenorhabditis elegans Hypothetical
protein Y17G9B.4 protein.
Length = 262
Score = 28.7 bits (61), Expect = 3.5
Identities = 26/87 (29%), Positives = 32/87 (36%)
Frame = +3
Query: 345 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXX 524
V + IG G IVI LF VP+T +NF E G G H +K I+
Sbjct: 99 VFIHVSIGGIEEGCIVIQLFNDIVPRTAQNFESWC-TGEKRGKYGEPLH--LKECEIKMI 155
Query: 525 XXXXXXXXXXRSIYGERFEDENFKLKH 605
E F+DE K H
Sbjct: 156 LPGSVIGFGDFEENCEYFDDEKSKENH 182
>AL021501-2|CAA16415.2| 356|Caenorhabditis elegans Hypothetical
protein Y61B8A.2 protein.
Length = 356
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 590 VFIFKTFTIYTAPSSSITLGKITTLDHEIFNYSVELAPFVPLPL 459
+F T Y + SIT+ K T ++F +S+ L F+PL L
Sbjct: 228 LFQVTTLIYYICIAPSITISKDTHHRQKVFLFSILLQCFIPLTL 271
>U28943-7|AAK68294.1| 315|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 56 protein.
Length = 315
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -1
Query: 611 TIVLQLEVFIFKTFTI---YTAPSSSITLGKITTLDHEIFNYSV 489
+IVL + +IF + + +TAP T+ +T ++H +N S+
Sbjct: 122 SIVLIIVSYIFPVYNMIIPFTAPRDFTTVQNLTAIEHSTYNLSL 165
>Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical
protein K12D12.2 protein.
Length = 1696
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 387 IVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKN 506
++ LF + + T ++ F Q P+ G GSK ++++N
Sbjct: 157 VIKNLFQQLINFTVQSEFARLQSPDVNGLGGSKHQKLVRN 196
>U22833-4|AAA64324.2| 181|Caenorhabditis elegans Hypothetical
protein W02B3.5 protein.
Length = 181
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = -1
Query: 530 KITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLSK*SNHNSTNIVITNLHVK 351
K T HEIFN+ V + F L FL L++ S L+ + N I + VK
Sbjct: 54 KECTTKHEIFNFMVMASNF---NLNFLENLEKGQSKLKLVQKNRTVGNGLRITVALNEVK 110
Query: 350 AHL 342
AH+
Sbjct: 111 AHI 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,352,516
Number of Sequences: 27780
Number of extensions: 266753
Number of successful extensions: 663
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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