Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1639
         (584 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77947-1|AAB41404.1| 2416|Drosophila melanogaster adenomatous po...    29   4.6  
AE014297-4275|AAF56820.1| 2417|Drosophila melanogaster CG1451-PA...    29   4.6  
AY051719-1|AAK93143.1| 1067|Drosophila melanogaster LD24920p pro...    28   8.1  
AF113913-1|AAD40227.1| 1067|Drosophila melanogaster epithelial a...    28   8.1  
AF091430-1|AAD20985.2| 1067|Drosophila melanogaster adenomatous ...    28   8.1  
AE014297-3482|AAF56249.1| 1067|Drosophila melanogaster CG6193-PA...    28   8.1  

>U77947-1|AAB41404.1| 2416|Drosophila melanogaster adenomatous
           polyposis coli protein.
          Length = 2416

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +2

Query: 185 VENCIAMVKRI*SHVAFCMPSQSHRRTCQSIYCSAYYLRTYYY*CLVNISSVCSRRYELT 364
           +EN   +++ + SH+A C P   +R+  +   C A  L+      L  +S+ C   + L+
Sbjct: 527 IENAGGILRNVSSHIAVCEP---YRQILRQHNCLAILLQQLKSESLTVVSNSCGTLWNLS 583

Query: 365 AAKA 376
           A  A
Sbjct: 584 ARSA 587


>AE014297-4275|AAF56820.1| 2417|Drosophila melanogaster CG1451-PA
           protein.
          Length = 2417

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +2

Query: 185 VENCIAMVKRI*SHVAFCMPSQSHRRTCQSIYCSAYYLRTYYY*CLVNISSVCSRRYELT 364
           +EN   +++ + SH+A C P   +R+  +   C A  L+      L  +S+ C   + L+
Sbjct: 527 IENAGGILRNVSSHIAVCEP---YRQILRQHNCLAILLQQLKSESLTVVSNSCGTLWNLS 583

Query: 365 AAKA 376
           A  A
Sbjct: 584 ARSA 587


>AY051719-1|AAK93143.1| 1067|Drosophila melanogaster LD24920p
           protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +2

Query: 185 VENCIAMVKRI*SHVAFCMPSQSHRRTCQSIYCSAYYLRTYYY*CLVNISSVCSRRYELT 364
           +EN   +++ + SH+A C P   +R+  +   C A  L+      L  +S+ C   + L+
Sbjct: 302 IENAGGILRNVSSHIAVCEP---YRQILRRYNCLAILLQQLKSESLTVVSNSCGTLWNLS 358

Query: 365 A 367
           A
Sbjct: 359 A 359


>AF113913-1|AAD40227.1| 1067|Drosophila melanogaster epithelial
           adenomatous polyposiscoli protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +2

Query: 185 VENCIAMVKRI*SHVAFCMPSQSHRRTCQSIYCSAYYLRTYYY*CLVNISSVCSRRYELT 364
           +EN   +++ + SH+A C P   +R+  +   C A  L+      L  +S+ C   + L+
Sbjct: 302 IENAGGILRNVSSHIAVCEP---YRQILRRYNCLAILLQQLKSESLTVVSNSCGTLWNLS 358

Query: 365 A 367
           A
Sbjct: 359 A 359


>AF091430-1|AAD20985.2| 1067|Drosophila melanogaster adenomatous
           polyposis coli 2 protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +2

Query: 185 VENCIAMVKRI*SHVAFCMPSQSHRRTCQSIYCSAYYLRTYYY*CLVNISSVCSRRYELT 364
           +EN   +++ + SH+A C P   +R+  +   C A  L+      L  +S+ C   + L+
Sbjct: 302 IENAGGILRNVSSHIAVCEP---YRQILRRYNCLAILLQQLKSESLTVVSNSCGTLWNLS 358

Query: 365 A 367
           A
Sbjct: 359 A 359


>AE014297-3482|AAF56249.1| 1067|Drosophila melanogaster CG6193-PA
           protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/61 (26%), Positives = 30/61 (49%)
 Frame = +2

Query: 185 VENCIAMVKRI*SHVAFCMPSQSHRRTCQSIYCSAYYLRTYYY*CLVNISSVCSRRYELT 364
           +EN   +++ + SH+A C P   +R+  +   C A  L+      L  +S+ C   + L+
Sbjct: 302 IENAGGILRNVSSHIAVCEP---YRQILRRYNCLAILLQQLKSESLTVVSNSCGTLWNLS 358

Query: 365 A 367
           A
Sbjct: 359 A 359


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,306,455
Number of Sequences: 53049
Number of extensions: 400082
Number of successful extensions: 743
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)