Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1636
         (354 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    36   0.15 
UniRef50_UPI0000498B23 Cluster: hypothetical protein 87.t00019; ...    31   5.7  
UniRef50_P18909 Cluster: Atrial natriuretic factor precursor; n=...    31   5.7  
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    30   9.9  

>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 36.3 bits (80), Expect = 0.15
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +1

Query: 310 PRGGARYPIRPIVSR 354
           PRGGARYPIRPIVSR
Sbjct: 259 PRGGARYPIRPIVSR 273


>UniRef50_UPI0000498B23 Cluster: hypothetical protein 87.t00019;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 87.t00019 - Entamoeba histolytica HM-1:IMSS
          Length = 223

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 11  ITAVTLGFIKLNKTPFLKPLHV*PIDRRLN 100
           ++ V  G++   KT FLKPL   P D++ N
Sbjct: 6   VSVVLFGYLNCGKTTFLKPLQSLPFDKQYN 35


>UniRef50_P18909 Cluster: Atrial natriuretic factor precursor; n=6;
           Anura|Rep: Atrial natriuretic factor precursor - Rana
           catesbeiana (Bull frog)
          Length = 145

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 273 YITYTIKLVGITASRGGPVPNSPYS 347
           Y+T+ + L+ +T  RGGP  NSP S
Sbjct: 8   YLTFVLLLLALTKVRGGPAYNSPLS 32


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -3

Query: 352 DSL*GELGTGPPLE 311
           DSL GELGTGPPLE
Sbjct: 279 DSLYGELGTGPPLE 292


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 313,698,261
Number of Sequences: 1657284
Number of extensions: 4717246
Number of successful extensions: 8502
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8502
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11514999177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)