Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1636
         (354 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   2.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   2.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   2.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    20   6.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    20   6.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   6.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   8.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   8.6  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 83  IDRRLNLDYFSNKKKKKH 136
           + RR+  D F NKK+K +
Sbjct: 332 VPRRVPFDLFENKKRKNN 349


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 2   NNYITAVTLGFIKLNKTPFLK 64
           NNY      GF  +NKT  L+
Sbjct: 308 NNYPDFSAAGFFSINKTTLLQ 328


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 173 IFGVKFFVTSNTHVFFF 123
           IFGV F+   +T  +FF
Sbjct: 234 IFGVSFYFFISTFFYFF 250


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 173 IFGVKFFVTSNTHVFFF 123
           IFGV F+   +T  +FF
Sbjct: 230 IFGVSFYFFISTFFYFF 246


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 140 THVFFFF 120
           TH+FFFF
Sbjct: 72  THIFFFF 78


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 220 TTAVVRSSVKYTKRLTVRTLLIQLS 294
           T+ ++  +  + K   +RTLLI+LS
Sbjct: 89  TSILLIVNAVFVKEKRIRTLLIKLS 113


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -2

Query: 152 VTSNTHVFFFFCS 114
           +T N H+ F  CS
Sbjct: 64  ITFNVHLLFLLCS 76


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 80   PIDRRLNLDYFSNKKK 127
            P D ++N  YF +K +
Sbjct: 1255 PFDPKVNFTYFEDKNE 1270


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 80   PIDRRLNLDYFSNKKK 127
            P D ++N  YF +K +
Sbjct: 1255 PFDPKVNFTYFEDKNE 1270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,580
Number of Sequences: 336
Number of extensions: 1365
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)