Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1633
(640 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 119 2e-27
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 119 2e-27
08_02_0657 - 19749835-19751942,19753123-19753561 51 9e-07
01_06_0280 + 28129750-28129868,28130677-28131145,28133605-281338... 36 0.021
04_04_0545 + 26141335-26141793,26141883-26141981 32 0.33
09_02_0042 - 3402424-3402534,3403242-3403345,3403448-3403562,340... 30 1.3
08_02_0819 - 21529913-21530064,21531016-21531082,21531284-215313... 30 1.8
09_04_0029 - 13932414-13933416,13933821-13933903 29 2.4
08_01_0601 - 5268520-5271112,5272448-5272950 29 2.4
09_01_0117 + 1808669-1809181,1810038-1810059,1810170-1810223,181... 29 3.1
08_01_0091 + 664913-664985,665281-665576,667197-667311,667901-66... 29 3.1
07_03_1170 - 24505743-24505875,24506087-24506475,24507133-245073... 29 3.1
04_04_0317 + 24341389-24341504,24341532-24341973 29 4.1
11_05_0075 + 18856659-18856878,18856890-18857107,18858253-188583... 28 5.4
12_01_0442 + 3495333-3496484 28 7.2
01_05_0183 + 19001582-19003102 28 7.2
10_08_0433 - 17889072-17889632,17890437-17890514,17892196-17892393 27 9.5
09_04_0030 + 13940168-13940250,13940703-13941714 27 9.5
04_03_0980 + 21406822-21409496,21410322-21410376 27 9.5
03_01_0408 + 3151984-3152666,3156061-3156368,3157594-3157946 27 9.5
02_05_0771 - 31628535-31629133,31629223-31629987,31630808-316309... 27 9.5
>10_08_0170 + 15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 119 bits (287), Expect = 2e-27
Identities = 65/128 (50%), Positives = 75/128 (58%)
Frame = -1
Query: 604 KGFSGADLTEICQRACKLGHSPGHRAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFE 425
+GFSGAD+TEICQRACK +I RER M+ DE D + EI AHFE
Sbjct: 695 QGFSGADITEICQRACKYAIRENIEKDIERERRSKENPE--AMEEDEVDDIAEIKAAHFE 752
Query: 424 EAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQPTFQEE 245
E+MK+ARRSVSD DIRKY+ FAQTLQQSRGFG+ FRF +
Sbjct: 753 ESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFERTEAGAGAAADPFASAAAVAD- 811
Query: 244 GGDDDLYS 221
DDDLYS
Sbjct: 812 --DDDLYS 817
>03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 119 bits (287), Expect = 2e-27
Identities = 65/128 (50%), Positives = 75/128 (58%)
Frame = -1
Query: 604 KGFSGADLTEICQRACKLGHSPGHRAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFE 425
+GFSGAD+TEICQRACK +I E+ R M+ DE D + EI AHFE
Sbjct: 686 QGFSGADITEICQRACKYAIRENIEKDIEMEKRRKDNPE--AMEEDEVDDIAEIKAAHFE 743
Query: 424 EAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQPTFQEE 245
E+MK+ARRSVSD DIRKY+ FAQTLQQSRGFGT FRF +
Sbjct: 744 ESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFADQPASGAGAAADPFASAAAAAD 803
Query: 244 GGDDDLYS 221
DDDLYS
Sbjct: 804 --DDDLYS 809
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 50.8 bits (116), Expect = 9e-07
Identities = 34/80 (42%), Positives = 43/80 (53%)
Frame = -1
Query: 601 GFSGADLTEICQRACKLGHSPGHRAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEE 422
GFSGAD+ EICQRACKL RE + + M E++ HF+
Sbjct: 693 GFSGADIKEICQRACKLA---------VREVVQKSTLVGKALAM----AGAELTVDHFKS 739
Query: 421 AMKFARRSVSDNDIRKYEMF 362
AMK AR+SVS+ D+ KYE F
Sbjct: 740 AMKHARKSVSELDVIKYEYF 759
>01_06_0280 +
28129750-28129868,28130677-28131145,28133605-28133802,
28134168-28134412,28134749-28134907,28135491-28135578,
28135983-28136264
Length = 519
Score = 36.3 bits (80), Expect = 0.021
Identities = 29/91 (31%), Positives = 43/91 (47%)
Frame = -1
Query: 640 DVDFVLHRQGDAKGFSGADLTEICQRACKLGHSPGHRAEIHRERSRXXXXXXAVMDMDEE 461
D+D V R +G+SG DLT +C+ A G + R+ + M DE
Sbjct: 432 DIDEVARR---TEGYSGDDLTNVCRDASMNG--------MRRKIAGKTRDEIKNMSKDEI 480
Query: 460 DPVPEISRAHFEEAMKFARRSVSDNDIRKYE 368
P ++ FEEA+ ++SVS DI K+E
Sbjct: 481 SKDP-VAMCDFEEALAKVQKSVSPADIEKHE 510
>04_04_0545 + 26141335-26141793,26141883-26141981
Length = 185
Score = 32.3 bits (70), Expect = 0.33
Identities = 23/92 (25%), Positives = 41/92 (44%)
Frame = +2
Query: 194 PRSRARHSLAVQVVVTPLLLERGLVAR*STRAPCSSRVCWESEVGSEAAALLQGLREHLV 373
P + R LA ++ + LLL + R+ + G EA A+++ +LV
Sbjct: 37 PPATGRRRLAASLLASQLLLLPAAATSVAGAFEFDLRITVPEQSGEEAEAVVKLHARNLV 96
Query: 374 LADVVVGHGAARELHRLLEVSAANLRNGVFLV 469
++ + REL L SAANL+ ++ +
Sbjct: 97 RVKGLIDARSWRELQAALRSSAANLKQDLYAI 128
>09_02_0042 -
3402424-3402534,3403242-3403345,3403448-3403562,
3404344-3404391,3404519-3404608,3404819-3404893,
3405001-3405153,3405695-3405779,3408051-3408121,
3408243-3408293,3409037-3409453,3409529-3409660,
3409779-3409892,3411113-3411179,3411264-3411397,
3411486-3411701,3412627-3413418
Length = 924
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/89 (22%), Positives = 35/89 (39%)
Frame = -1
Query: 595 SGADLTEICQRACKLGHSPGHRAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAM 416
SG + Q AC++G + H IH+ + MD +EE +I++ E
Sbjct: 243 SGDGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQ-ERLR 301
Query: 415 KFARRSVSDNDIRKYEMFAQTLQQSRGFG 329
K + IR+ + S+ +G
Sbjct: 302 KKVTDLMKKQKIRQVRNIVKKQDNSKPWG 330
>08_02_0819 -
21529913-21530064,21531016-21531082,21531284-21531373,
21531506-21531622,21532026-21532145,21532313-21533581
Length = 604
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 570 ASEPAS-LAIRQAIERRSIARGVASSKPPLPLWTWTRKTP 454
AS P + + + A E I+R AS+KPP LW R P
Sbjct: 107 ASRPRTPVRVAAATEVHGISRRAASTKPPDGLWASARSVP 146
>09_04_0029 - 13932414-13933416,13933821-13933903
Length = 361
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = -2
Query: 291 GARVLQRATSPRSRRRGVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTWR 112
G RV +TSP RR + + ++RD G + T +L+ A P P +
Sbjct: 202 GMRVTVISTSPGKRREALEHLGADEFLVSRDAGQMAAAAGTMDGILNTVSAWHPVAPLFA 261
Query: 111 L 109
L
Sbjct: 262 L 262
>08_01_0601 - 5268520-5271112,5272448-5272950
Length = 1031
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 368 LVLADVVVGHGAARELHR-LLEVSAANLRNGVFLVHVHNGSGGLLLATPLAMDLRS 532
LV D G AA +H+ +L+ + A R+ FL HVH+G+ GL + LR+
Sbjct: 550 LVETDAAGGRVAAVSVHQAVLDFAQAEARDTNFL-HVHSGAAGLSNGAARRLALRN 604
>09_01_0117 +
1808669-1809181,1810038-1810059,1810170-1810223,
1810684-1810892
Length = 265
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -2
Query: 279 LQRATSPRSRRRGVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRP-TTPTWRLAP 103
L R PR R R T T + R +PP + TR LSV P+ P P+ +A
Sbjct: 17 LSRTPPPRRRLRLRTPTPCHRASTTRRALHTPPHQRTRLPPLSVAPSASPLLNPSIHVAA 76
Query: 102 AGS 94
A S
Sbjct: 77 APS 79
>08_01_0091 +
664913-664985,665281-665576,667197-667311,667901-667971
Length = 184
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 544 SPGHRAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSVSDNDIRK 374
+PG +H R++ AV D DE++ PE+ R F+ +F RR S + + K
Sbjct: 81 NPGETPTMHVPRNKRQDLDLAVDDFDEDEIDPEL-RYSFQRNSRFLRRVFSVDTLVK 136
>07_03_1170 -
24505743-24505875,24506087-24506475,24507133-24507369,
24507967-24508136,24510196-24510316
Length = 349
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 182 GGDAPRSRARHSLAVQVVVTPL 247
GGDA ++ HSL+V V+V+PL
Sbjct: 211 GGDADTTQLYHSLSVPVIVSPL 232
>04_04_0317 + 24341389-24341504,24341532-24341973
Length = 185
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 501 WRLLSRWISARWPGEWPSLQA 563
WR+L W +A WP WP L A
Sbjct: 20 WRMLRMWTAAGWP--WPYLAA 38
>11_05_0075 +
18856659-18856878,18856890-18857107,18858253-18858319,
18858706-18859397
Length = 398
Score = 28.3 bits (60), Expect = 5.4
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Frame = +2
Query: 101 AGARRHVGVV--GRHAGQTDRTLVLVYRDGGDAPRSRARHSLAVQVVVTPLLLERGLVAR 274
AG R G + G H G+ RT L+ A R AVQ +VTP ++A+
Sbjct: 251 AGRRAIAGRLAKGEH-GRRRRTGGLLPDSAATARRRVEGGDAAVQGIVTPSQESELVIAK 309
Query: 275 *STRAPCSSRV-CWESEVGSEAAALLQGL---REHLVLADV-VVGHGAARELHR 421
+ + WE + G+EA ALL+ L + L LA+ V GA E R
Sbjct: 310 TGDVIASTYYMRAWERDAGAEADALLEELWNVKAKLELAETKAVAAGALSEKAR 363
>12_01_0442 + 3495333-3496484
Length = 383
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -2
Query: 258 RSRRRGVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTW 115
RS G +T C A R +G+ P R + PA P +P W
Sbjct: 132 RSGPMGRSTLCNACGVRLRAVGSLPEHRAPAARTTTAAPASPPDSPIW 179
>01_05_0183 + 19001582-19003102
Length = 506
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 564 EPASLAIRQAIERRSIA-RGVASSKPPLPLWTWTRKTP 454
E LA+ + RR ++ R A++ P WTWTR P
Sbjct: 240 ERLELAVLGRLLRRFVSKRFAAAAYPEFKSWTWTRPPP 277
>10_08_0433 - 17889072-17889632,17890437-17890514,17892196-17892393
Length = 278
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 41 AAVCLELHVRCLRHYRIREPAGARRHVGVVGRHAGQ 148
A C +V+C+ + +RE R+H V +AG+
Sbjct: 190 ALYCGVCNVKCMTRFNLREHEAGRKHRDKVASNAGE 225
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = -2
Query: 291 GARVLQRATSPRSRRRGVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTWR 112
G RV +TSP R+ + + ++RD G + T +L+ A P P +
Sbjct: 205 GMRVTVISTSPGKRQEALEHLGADEFLVSRDAGQMAAAAATMDGILNTVSAWHPIAPLFS 264
Query: 111 L 109
L
Sbjct: 265 L 265
>04_03_0980 + 21406822-21409496,21410322-21410376
Length = 909
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 389 VGHGAARELHRLLEVSAANLRNGVFLVHVHNGSG 490
V G+ E+ + EV LR+ F+V HNGSG
Sbjct: 31 VDEGSRSEIMSVAEVIDQVLRDHKFMVAFHNGSG 64
>03_01_0408 + 3151984-3152666,3156061-3156368,3157594-3157946
Length = 447
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 232 RRHPPPPGTWAGRP 273
RRHPPPPG A P
Sbjct: 40 RRHPPPPGPGARNP 53
>02_05_0771 -
31628535-31629133,31629223-31629987,31630808-31630905,
31631024-31631193,31631297-31631596,31632208-31632618
Length = 780
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +2
Query: 158 TLVLVYRDGGDAPRSRARHSLAVQVVVTPLLLERGLVAR*STRAPCSSRVCWESEVGSEA 337
++ ++ + DA R + + VTPL + +G V A C+S C S +G EA
Sbjct: 424 SIAVIGHNANDATRLLGNYFGPPCISVTPLQVLQGYVKDTRFLAGCNSAACNVSSIG-EA 482
Query: 338 AALLQGLREHLVL 376
A L + +++VL
Sbjct: 483 AQLASSV-DYVVL 494
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,367,919
Number of Sequences: 37544
Number of extensions: 459074
Number of successful extensions: 1827
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1824
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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