Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1584
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.53 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.53 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.53 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.53 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        24   1.2  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.8  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   3.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   3.8  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.7  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 578 YFIYLFIFCFMCVLMF 625
           YFIY+F+  + C+L F
Sbjct: 296 YFIYMFVSVWKCLLFF 311


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 578 YFIYLFIFCFMCVLMF 625
           YFIY+F+  + C+L F
Sbjct: 296 YFIYMFVSVWKCLLFF 311


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 578 YFIYLFIFCFMCVLMF 625
           YFIY+F+  + C+L F
Sbjct: 296 YFIYMFVSVWKCLLFF 311


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 578 YFIYLFIFCFMCVLMF 625
           YFIY+F+  + C+L F
Sbjct: 296 YFIYMFVSVWKCLLFF 311


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 542 GKRIFQIGPVVSEPIRNKQTNKSFLFIIL 456
           GK    + PVVSEPI +K+     + + L
Sbjct: 218 GKFTVPLTPVVSEPIYDKKAMSDLMIVKL 246


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 592 IYFLFHVCFNVS 627
           +Y+L HVC NVS
Sbjct: 265 LYYLSHVCQNVS 276


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 506 PKLLDRFEKFFFH*KPTLSLMNI 574
           P+LLDR++ F+   K  L L  I
Sbjct: 40  PELLDRYDNFYQTTKSLLVLFQI 62


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 506 PKLLDRFEKFFFH*KPTLSLMNI 574
           P+LLDR++ F+   K  L L  I
Sbjct: 40  PELLDRYDNFYQTTKSLLVLFQI 62


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 200 QYLNNLLWYIPSS 162
           +Y N   WY+P S
Sbjct: 455 EYTNICFWYVPKS 467


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 590 LFIFCFMCVLMF 625
           LF F F C+L F
Sbjct: 10  LFFFSFCCILFF 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,719
Number of Sequences: 336
Number of extensions: 2877
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)