Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1580
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.3  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   4.0  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   4.0  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   4.0  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   5.2  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   9.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 246  DENSTKLYSQCVLGVIPKYRCA 181
            D ++   Y +CVLG + K  CA
Sbjct: 1111 DPHNCNAYYRCVLGELRKQYCA 1132


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 482 VQENDEIDVEQLIFFCIFATLDILC 408
           +QEND + +  LIF     T +++C
Sbjct: 900 LQENDWLQLGYLIFVSTLYTANVVC 924


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 382 CRKWLNPMLMTSFDTSVTP 326
           CR  +N   +  FD SVTP
Sbjct: 58  CRFSINQPYLNHFDNSVTP 76


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 382 CRKWLNPMLMTSFDTSVTP 326
           CR  +N   +  FD SVTP
Sbjct: 58  CRFSINQPYLNHFDNSVTP 76


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 382 CRKWLNPMLMTSFDTSVTP 326
           CR  +N   +  FD SVTP
Sbjct: 58  CRFSINQPYLNHFDNSVTP 76


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 458 HQSHHFLARPP 490
           H  HH  ARPP
Sbjct: 53  HHHHHLQARPP 63


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = -1

Query: 584 LCSHCGIKFARFAQSCNVAI 525
           LC+H    F    + CN+ +
Sbjct: 51  LCTHINYAFVGLDKDCNIQV 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,213
Number of Sequences: 336
Number of extensions: 2750
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)