Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1579
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.077
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.13 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    25   0.71 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   0.94 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 0.077
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 319 CV*YFLIDLMYLLCII*KKY*RCALLLYILY 227
           C+ YF++ L +LLCI    Y  CA +++ ++
Sbjct: 132 CIYYFVVPLFFLLCIY---YFYCAFIIFTVH 159



 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 319 CV*YFLIDLMYLLCI 275
           C+ YF + L++L CI
Sbjct: 198 CLDYFTLHLLFLPCI 212



 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 319 CV*YFLIDLMYLLCI 275
           C+ YF   L+ LLCI
Sbjct: 284 CIYYFYCALIILLCI 298


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 64   CKNEPIKDKNAFSDFLQLMSSCNKP 138
            C   P  DK+AF+DF++ +    KP
Sbjct: 1954 CNKGPASDKSAFADFVKELHEAFKP 1978


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -2

Query: 506 FVHYYDC---ILYFYNHKFRQDYTKKNINKDK*YLIYSHFDN 390
           F+ Y  C   +LY+   K    +  KN+  DK +L +  F N
Sbjct: 2   FLAYIACFLLLLYYIYSKHYSYWQSKNVPTDKPFLFFGSFYN 43


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = +3

Query: 414 ILFVFVNIFFSVVL 455
           ++F+FVN+FF V++
Sbjct: 97  LIFIFVNVFFWVII 110


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 321 YVPCI*HTHACILFIVRLLFL 383
           Y P +   +AC+L +V++L++
Sbjct: 39  YYPSLAKCYACLLMVVKILWV 59


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 398 FDNRRQEQKPDNK 360
           F NRR + K DNK
Sbjct: 281 FQNRRMKWKKDNK 293


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 398 FDNRRQEQKPDNK 360
           F NRR + K DNK
Sbjct: 281 FQNRRMKWKKDNK 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,615
Number of Sequences: 336
Number of extensions: 3286
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)