BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1579
(651 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146743-1|AAO12103.1| 192|Anopheles gambiae odorant-binding pr... 25 1.6
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 24 4.8
AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide recepto... 23 8.4
>AY146743-1|AAO12103.1| 192|Anopheles gambiae odorant-binding
protein AgamOBP11 protein.
Length = 192
Score = 25.4 bits (53), Expect = 1.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 362 YCQAFVLDVCCQNENRLNIICL 427
+C F L CC+N + +++CL
Sbjct: 117 HCVQFGLGECCENFSNRHLVCL 138
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 23.8 bits (49), Expect = 4.8
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = -2
Query: 503 VHYYDCILYFYNHKFRQDYTKKNINKD 423
++ +D L + H+F+ D K+N D
Sbjct: 1183 IYQFDLNLVNFEHRFKLDLEKQNTGSD 1209
>AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide receptor
protein.
Length = 493
Score = 23.0 bits (47), Expect = 8.4
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -2
Query: 596 RENYLFLFYDRTRC*TVVVEISTIINWNCKFVHYYDCILYFYNHK 462
R + +L RC TV++ S +I C ++ + LY+Y+++
Sbjct: 114 RSSINYLLIGLARCDTVLILTSVLIFGLCA-IYPHTGYLYYYHYQ 157
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,043
Number of Sequences: 2352
Number of extensions: 12790
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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