Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1577
         (629 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    26   0.23 
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    25   0.39 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    24   0.91 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   3.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.9  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.5  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = +3

Query: 261 ENGMVHGAVVQKYLLEKSRICSQGRNERNYHVFYYLLAGASEQEREQLHLLSVDKYNYLS 440
           +N ++  A   K L+ K RI     +ERN  +   L    SE E       S+D    LS
Sbjct: 363 DNALLFSANSTKKLIVKIRIDIDKEDERNEIISSALKLSQSELEITACKFFSIDNALLLS 422

Query: 441 KTGCS 455
             G S
Sbjct: 423 ICGAS 427


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 25.4 bits (53), Expect = 0.39
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 219 NSSRFGKFIQVNYKENGMVHGAVVQKYLLEKSRICSQGR 335
           N S F KFI  +Y    ++  + +      +SRI  QGR
Sbjct: 15  NGSNFSKFINCHYTSGHLLGSSSLPLRSFYRSRIRYQGR 53


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 489 SRLKQSMEMVGFTMDKQRRLFAVLSAVLLLGNVEFHPNEKSY 614
           S +K + E  GFT+DK   +   +S   L  + E++P+ + Y
Sbjct: 370 SDVKYTFEETGFTLDKGVSIMVPISG--LHYDPEYYPDPEKY 409


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
 Frame = +1

Query: 301 YWKSREYAAKVAT--RGIITYFITYWRVLRNRRE 396
           Y KS  Y   V +     I YF  +W +L +R +
Sbjct: 47  YLKSYTYIKLVVSVLMDFIAYFFNFWTILFSRSD 80


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +2

Query: 104 SFNCAQSEGFARQWCRTDNFKC 169
           S  C  S+G++  +C+T+  +C
Sbjct: 167 SHRCHCSDGYSGSYCQTEINEC 188


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 409 YSVWTSTTIYQRPVVVMCLVRTN 477
           Y  W S +++  P+VV+    T+
Sbjct: 203 YVTWYSISVFMVPLVVLIFTYTS 225


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,289
Number of Sequences: 336
Number of extensions: 3113
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)