Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1576
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 31 0.96
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 2.9
U64848-9|AAB04887.1| 128|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF067613-14|ABA54416.1| 395|Caenorhabditis elegans Hypothetical... 29 3.9
Z73976-8|CAI79223.1| 215|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z49867-1|CAA90027.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.1
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL031633-19|CAA21031.1| 710|Caenorhabditis elegans Hypothetical... 28 6.8
Z99710-9|CAN99658.1| 402|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z99710-8|CAB16868.1| 383|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 27 8.9
U39666-3|AAA80410.2| 178|Caenorhabditis elegans Hypothetical pr... 27 8.9
EF015633-1|ABK20307.1| 383|Caenorhabditis elegans alpha 1,2-fuc... 27 8.9
AL110477-5|CAB54329.1| 314|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 33.5 bits (73), Expect = 0.14
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +3
Query: 264 SSTGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKK 443
SST + S + + T++P T K T TS+PTS + T A ++ +
Sbjct: 162 SSTASVSSTILSSTATTMVTSTPT-TEKSSTTTTSTPTSEATSTTTAMITTTSGTTENPT 220
Query: 444 TT-CPTK*SELWSHPT 488
TT CPTK HPT
Sbjct: 221 TTDCPTKVCRYGFHPT 236
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 30.7 bits (66), Expect = 0.96
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -1
Query: 472 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSF 296
NS YFVGH F F +S ++++A V A + G+ V + +V N E++ S
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537
Query: 295 TQKLFAAPVD 266
+L A P+D
Sbjct: 1538 EVRL-AKPLD 1546
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 30.7 bits (66), Expect = 0.96
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -1
Query: 472 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSF 296
NS YFVGH F F +S ++++A V A + G+ V + +V N E++ S
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537
Query: 295 TQKLFAAPVD 266
+L A P+D
Sbjct: 1538 EVRL-AKPLD 1546
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 30.7 bits (66), Expect = 0.96
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -1
Query: 472 NSDYFVGHVVF-FPPKSVLSEELVAPVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSF 296
NS YFVGH F F +S ++++A V A + G+ V + +V N E++ S
Sbjct: 1478 NSPYFVGHTAFAFVDESDTVDDVLATVTAFDKDRGENGIVTYSIVSGNEESLFKIDAKSG 1537
Query: 295 TQKLFAAPVD 266
+L A P+D
Sbjct: 1538 EVRL-AKPLD 1546
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +3
Query: 321 TASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA*T 500
T +P TT T T++PT+ APT T++ T TT T + + PT T
Sbjct: 172 TTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTT--TPTTTTTVPTTTTTTPTTTTT 229
Query: 501 TNT 509
T T
Sbjct: 230 TTT 232
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 321 TASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKKTTCPTK*SELWSHPTWA*T 500
T +P TT T T++PT+ PT T+ + T TT PT ++ + PT T
Sbjct: 221 TTTPTTTT----TTTTTPTTTTTTPTTTTTPATTT--SETTTTTPTTTTQTTTKPTTTTT 274
Query: 501 TNT 509
T T
Sbjct: 275 TPT 277
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 321 TASPL*TTKR*WTCTSSPTSNPHAPTGATSS-SLNTLLGGKKTTCPTK*SELWSHPTWA* 497
T +P TT T T++PT+ PT T++ + T TT PT + + T
Sbjct: 151 TTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTP 210
Query: 498 TTNT 509
TT T
Sbjct: 211 TTTT 214
>U64848-9|AAB04887.1| 128|Caenorhabditis elegans Hypothetical
protein C50E3.3 protein.
Length = 128
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3
Query: 395 WGVWV*GWRRGTRPSPLGRLQWGSCPQQNGSKFHAKTLCRSS 270
WGVW GTR + G + C G KF+ KTL S
Sbjct: 24 WGVWF----DGTRKTKCGPSELTQCNSLKGFKFNDKTLVSKS 61
>AF067613-14|ABA54416.1| 395|Caenorhabditis elegans Hypothetical
protein F56D6.15 protein.
Length = 395
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 345 KR*WTCTSSPTSNPHA--PTGATSSSLNTLLGGKKT 446
K + C+ PT P A PT T++++N LGG++T
Sbjct: 113 KNYFVCSYDPTVQPKATTPTTTTAANVNCPLGGQQT 148
>Z73976-8|CAI79223.1| 215|Caenorhabditis elegans Hypothetical
protein T07C12.14 protein.
Length = 215
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 110 KHLVEHEQEEKQWDLLDNYMVAEDPFLGPGKNQKLTLFKEIRSVK 244
+HL + E E K+ D+L ++AE ++ + F+E R K
Sbjct: 35 EHLTQEEYERKKTDILRRAVLAESQYIALRTQLRDNKFREAREYK 79
>Z49867-1|CAA90027.1| 312|Caenorhabditis elegans Hypothetical
protein C33D3.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 635 VNEWVCKSSPI*RGSQTTRTSWCTRCECS*LGSRRP 528
V E+VCK+ I G T + C C+C GSR+P
Sbjct: 46 VREFVCKTCKINEGIFTYK---CDNCKCWNKGSRKP 78
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.9 bits (59), Expect = 6.8
Identities = 26/75 (34%), Positives = 36/75 (48%)
Frame = +3
Query: 264 SSTGAAKSFCVKLGPVLLRTASPL*TTKR*WTCTSSPTSNPHAPTGATSSSLNTLLGGKK 443
S++G S L + + T SP +T+ T TS P+S+P T + SSS T +
Sbjct: 1960 STSGTNPSSPRSLSQITI-TPSPSQSTES--TQTSLPSSSPSPSTHSVSSSEGTTMSSGA 2016
Query: 444 TTCPTK*SELWSHPT 488
TT K S L S T
Sbjct: 2017 TTSGDKMSFLSSTGT 2031
>AL031633-19|CAA21031.1| 710|Caenorhabditis elegans Hypothetical
protein Y39A1A.22 protein.
Length = 710
Score = 27.9 bits (59), Expect = 6.8
Identities = 23/106 (21%), Positives = 44/106 (41%)
Frame = +2
Query: 107 KKHLVEHEQEEKQWDLLDNYMVAEDPFLGPGKNQKLTLFKEIRSVKPDTMKLIVNWSGKE 286
+K E +QE + +L + +AE +L +FK++ + DT + + GK+
Sbjct: 52 EKFFNECDQELTKINLFFSQKIAEGQGKHHELQTELQVFKDVLGSRSDTTGIRRRFGGKD 111
Query: 287 FLRETWTRFVEDSFPIVNDQEVMDVYLVANLKPTRPNRCYKFLAQH 424
+ TR E + + + + LV N + K L +H
Sbjct: 112 KFHKETTR-NEQQLKLAFSEFYLSLVLVQNFQQLNATGFRKILKKH 156
>Z99710-9|CAN99658.1| 402|Caenorhabditis elegans Hypothetical
protein F08A8.5b protein.
Length = 402
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -1
Query: 400 PVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSFTQKL 284
P G G ++ + + +H + +AV+N T PSF + L
Sbjct: 91 PSGGLGNKLFEIISLHGIATSLQRKAVINATNPSFIETL 129
>Z99710-8|CAB16868.1| 383|Caenorhabditis elegans Hypothetical
protein F08A8.5a protein.
Length = 383
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -1
Query: 400 PVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSFTQKL 284
P G G ++ + + +H + +AV+N T PSF + L
Sbjct: 72 PSGGLGNKLFEIISLHGIATSLQRKAVINATNPSFIETL 110
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 155 EDPIASPLVHVRLGASCAWRF**DSPSFCN 66
E PI S V R G SC + SP FCN
Sbjct: 647 ECPIGSVEVDPRFGTSCRYSLQCPSPYFCN 676
>U39666-3|AAA80410.2| 178|Caenorhabditis elegans Hypothetical
protein K04E7.1 protein.
Length = 178
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 529 LFSQTNSVFVVHAHVGWLHNSDYFVGHVVFFPPKSVLSEELVAPVGACG 383
L++ + V+V ++ WLH S G+V FP + L LV CG
Sbjct: 45 LYAVSFVVYVTNSICSWLHISFVVKGYVTSFPLNTWLVVSLVV-TAVCG 92
>EF015633-1|ABK20307.1| 383|Caenorhabditis elegans alpha
1,2-fucosyltransferase protein.
Length = 383
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -1
Query: 400 PVGACGFEVGDEVHVHHLLVVYNGEAVLNKTGPSFTQKL 284
P G G ++ + + +H + +AV+N T PSF + L
Sbjct: 72 PSGGLGNKLFEIISLHGIATSLQRKAVINATNPSFIETL 110
>AL110477-5|CAB54329.1| 314|Caenorhabditis elegans Hypothetical
protein Y113G7B.7 protein.
Length = 314
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 440 EDYVPHEVIRIVEPSYVGMNN 502
+D + EV+R+ +PSY+G +N
Sbjct: 268 DDEIEPEVVRLFDPSYIGNDN 288
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,664,098
Number of Sequences: 27780
Number of extensions: 371397
Number of successful extensions: 1167
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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