Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1573
         (595 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4VDV5 Cluster: Putative uncharacterized protein; n=1; ...    33   5.0  
UniRef50_A0R9S1 Cluster: Minor extracellular protease VpR, subti...    33   6.7  
UniRef50_Q8IKQ6 Cluster: Putative uncharacterized protein; n=2; ...    32   8.8  

>UniRef50_A4VDV5 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 176

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = -1

Query: 343 MVYFDNHNCVLLLEFFR-IIISHAWILLFIYD*KNLIRVILFKRCLKQWSLV 191
           ++YF N    LLL  F  ++IS+    LFI++ K LI  I F + LK+++L+
Sbjct: 57  LIYFFNFQYFLLLFLFSYLVISY---FLFIFNSKQLINQIFFLQYLKRYNLI 105


>UniRef50_A0R9S1 Cluster: Minor extracellular protease VpR,
            subtilisin-like serine protease; n=10; Bacillus cereus
            group|Rep: Minor extracellular protease VpR,
            subtilisin-like serine protease - Bacillus thuringiensis
            (strain Al Hakam)
          Length = 1448

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 185  LNNKRPLFKATFE*DYSNKIFLIINEQ*NPRVANY 289
            LNN + L   TFE  YS ++F  ++ + NP +A Y
Sbjct: 1129 LNNVKQLMSGTFEIPYSKQLFKFVDVKPNPALAEY 1163


>UniRef50_Q8IKQ6 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 3018

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -3

Query: 164 VSITGILYVCCFSYL*VDFKK*LLLSNMKYGAKCHN-YGLQIHHNKRATLEKKKK 3
           +S+ G LY+  F Y   +FKK        YG K HN Y    H+ K+   +KKKK
Sbjct: 425 LSVNGELYIFSFFYKFFNFKKNKCC--YYYGKKVHNQYYNHRHYEKKKKKKKKKK 477


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,682,105
Number of Sequences: 1657284
Number of extensions: 9206506
Number of successful extensions: 14414
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14411
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)