Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1572
         (368 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         218   6e-59
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         218   6e-59
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         218   6e-59
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          208   4e-56
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   2.1  
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    23   2.8  
EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.          23   3.6  
AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450 CY...    23   3.6  
AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450 CY...    23   3.6  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   4.8  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    23   4.8  
AY062205-1|AAL58566.1|  154|Anopheles gambiae cytochrome P450 CY...    22   6.4  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  218 bits (532), Expect = 6e-59
 Identities = 98/99 (98%), Positives = 98/99 (98%)
 Frame = +1

Query: 70  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 249
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 250 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 366
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 99


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  218 bits (532), Expect = 6e-59
 Identities = 98/99 (98%), Positives = 98/99 (98%)
 Frame = +1

Query: 70  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 249
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 250 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 366
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 99


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  218 bits (532), Expect = 6e-59
 Identities = 98/99 (98%), Positives = 98/99 (98%)
 Frame = +1

Query: 70  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 249
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 250 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 366
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 99


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  208 bits (509), Expect = 4e-56
 Identities = 91/99 (91%), Positives = 95/99 (95%)
 Frame = +1

Query: 70  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 249
           MCD++  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEA 
Sbjct: 1   MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60

Query: 250 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 366
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAP
Sbjct: 61  SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAP 99


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 177 GKAPPSGRDGRYGTEGL 227
           G+  P GRDG +G  GL
Sbjct: 344 GQPGPRGRDGNFGPVGL 360


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 64  FKMCDEEVAALVVDNGSGMC 123
           +++C E+ A   +DNG+ MC
Sbjct: 42  YRVCHEQHATPQMDNGTVMC 61


>EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 183 PSHDRGEHGARSIISC 136
           P+H RGEHG +    C
Sbjct: 121 PNHARGEHGQQPAERC 136


>AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450
           CYP4C28 protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 262 YLFCCVPHLLHKSPSVP 212
           YL CC+   L   PS+P
Sbjct: 60  YLECCIKESLRLFPSIP 76



 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 252 QKRYPDPQIPHRTRNRH 302
           +K YPD  +P  + NRH
Sbjct: 117 EKFYPDRFLPENSTNRH 133


>AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450
           CYP4G17 protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 264 PDPQIPHRTRNRH 302
           PD  +P RT+NRH
Sbjct: 122 PDNFLPERTQNRH 134


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 141 SCETGLAHTGAIVYYQRGNFFVAHLELVFN*IVLL*INKLTC 16
           S  TGLAH    +   RG   +AH +L    I++   + LTC
Sbjct: 162 SIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVK--SNLTC 201


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 355 AAHCRRYDAKSSPCHPS 305
           +AH RR+D  SSP  P+
Sbjct: 170 SAHDRRFDDASSPAVPA 186


>AY062205-1|AAL58566.1|  154|Anopheles gambiae cytochrome P450
           CYP4C26 protein.
          Length = 154

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 262 YLFCCVPHLLHKSPSVP 212
           YL CC+   L   PS+P
Sbjct: 60  YLECCIKEGLRLYPSIP 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,375
Number of Sequences: 2352
Number of extensions: 9908
Number of successful extensions: 30
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27944475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)