Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1571
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical pr... 31 0.53
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 31 0.53
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 31 0.53
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 30 1.2
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF194964-1|AAF28314.1| 632|Caenorhabditis elegans polo-like kin... 30 1.6
AC024201-9|AAF36014.1| 632|Caenorhabditis elegans Polo kinase p... 30 1.6
Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical p... 29 2.8
U39850-9|AAM45371.1| 440|Caenorhabditis elegans Polyq (poly glu... 29 2.8
U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription f... 29 2.8
U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein ( Caeno... 29 2.8
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z79759-2|CAB02137.1| 255|Caenorhabditis elegans Hypothetical pr... 28 4.9
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 4.9
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 4.9
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 28 6.5
U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical pr... 28 6.5
>Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical
protein F35E12.7a protein.
Length = 739
Score = 31.5 bits (68), Expect = 0.53
Identities = 25/108 (23%), Positives = 46/108 (42%)
Frame = +3
Query: 234 IAPVAYSAISPVVATTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIA 413
+ P + +P+V + T + +ST+ V ST ++ I + +S S
Sbjct: 481 VVPSGSFSTAPIVTSVSTRATRVSSSTAPVVST--VTSTITSQSIVTTNKSSSPITSKTT 538
Query: 414 PSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVATHLIKKRS 557
S ++ +T ++ P+ +TT Q AST +P+ T I S
Sbjct: 539 TSINVSSSTTKSTRPMQSTTTYQKLAQASSTASTTPIPITTQNISTAS 586
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform e protein.
Length = 2702
Score = 31.5 bits (68), Expect = 0.53
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 123 SKLASSVVHPSPLVYSTPYGYTHF-IKKRSAPLAHAAYIAPVAYSAISPVVATTYHGKTP 299
SK +S + H + S P Y I ++ A L Y ++ + VAT K
Sbjct: 1599 SKSSSDIQHSQVVNLSRPSPYVQVEIIRKGANLGTPTYFHARETTSKTENVATQLSRKEE 1658
Query: 300 LLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSY 425
+ S +TPL+++P+ + ++ K S + +A Y
Sbjct: 1659 KM-EVSTTHTTPLLAEPVTFDSNASKSHSTSLDKNLVASEDY 1699
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 31.5 bits (68), Expect = 0.53
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 123 SKLASSVVHPSPLVYSTPYGYTHF-IKKRSAPLAHAAYIAPVAYSAISPVVATTYHGKTP 299
SK +S + H + S P Y I ++ A L Y ++ + VAT K
Sbjct: 6445 SKSSSDIQHSQVVNLSRPSPYVQVEIIRKGANLGTPTYFHARETTSKTENVATQLSRKEE 6504
Query: 300 LLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSY 425
+ S +TPL+++P+ + ++ K S + +A Y
Sbjct: 6505 KM-EVSTTHTTPLLAEPVTFDSNASKSHSTSLDKNLVASEDY 6545
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 30.3 bits (65), Expect = 1.2
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 2/145 (1%)
Frame = +3
Query: 135 SSVVHPSPLVYSTPYGYTHFIKKRSAPLAHAAY--IAPVAYSAISPVVATTYHGKTPLLA 308
S + HP+ +T Y + S+P H P + +A + ++ T + A
Sbjct: 2968 SEITHPTVTQTTTTVPY----RSTSSPNNHVRMRPYQPRSDTASNATLSYTTDSERTSTA 3023
Query: 309 STSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASGPLGATTYTTPF 488
+ S T S+ S K+RSPQ PVS I + P ++G L +T P
Sbjct: 3024 TDLSSSYTSDASESTVQSTVVNKRRSPQPPVSPIPRA----PPLRNSNGFLASTNNFQPL 3079
Query: 489 VQTVPIASTASLPVATHLIKKRSAP 563
+P+ S P H ++ +AP
Sbjct: 3080 PTDIPMRSD---PELNHFVELHAAP 3101
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 405 YIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLP 527
+I PSS I N + P YTT T P++ TA LP
Sbjct: 295 FIRPSSIIRNNVWKKVTPSVTPEYTTSVFWTTPMSVTAELP 335
>AF194964-1|AAF28314.1| 632|Caenorhabditis elegans polo-like kinase
2 protein.
Length = 632
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 421 PTSLPTPTSQV--ALLEPLPTRHPSCRP-CRSH 510
PTS SQ+ LL+P+P+R P+ R CR H
Sbjct: 253 PTSASAAASQLIRVLLDPVPSRRPNARAVCRDH 285
>AC024201-9|AAF36014.1| 632|Caenorhabditis elegans Polo kinase
protein 2 protein.
Length = 632
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 421 PTSLPTPTSQV--ALLEPLPTRHPSCRP-CRSH 510
PTS SQ+ LL+P+P+R P+ R CR H
Sbjct: 253 PTSASAAASQLIRVLLDPVPSRRPNARAVCRDH 285
>Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical
protein K02E2.8a protein.
Length = 188
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +3
Query: 369 FIKKRSPQWPVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVAT 536
F+K + P ++ P + P T + + A T T P T P+++T + T
Sbjct: 7 FVKLAAACIPTQFVTP---LNPGTITTTTTISAPTTTVPITTTNPVSTTTTTTTTT 59
>Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 403 ATSLLAPTSLPTPTSQVALLEPLPTRHPS 489
+TS AP++ P PTS +LE PT P+
Sbjct: 100 STSTTAPSTAPAPTSTTDVLELKPTTAPA 128
>Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 403 ATSLLAPTSLPTPTSQVALLEPLPTRHPS 489
+TS AP++ P PTS +LE PT P+
Sbjct: 100 STSTTAPSTAPAPTSTTDVLELKPTTAPA 128
>U39850-9|AAM45371.1| 440|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform f
protein.
Length = 440
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 204 RSAP-LAHA-AYIAPVAYSAISPVVATTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIK 377
+SAP L HA AY P++ P ++ P++ STS + +P + QP+ H+
Sbjct: 6 QSAPVLVHAHAYQPPLSPPQSPPHGYLPFYTSNPMMCSTSPLYFSPQMVQPLPPQQHY-- 63
Query: 378 KRSPQWPVSYIAPSSYIT 431
+P + P Y T
Sbjct: 64 ---HMYPSTSAGPGMYYT 78
>U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription
factor E12/47 homolog protein.
Length = 399
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 403 ATSLLAPTSLPTPTSQVALLEPLPTRHPS 489
+TS AP++ P PTS +LE PT P+
Sbjct: 100 STSTTAPSTAPAPTSTTDVLELKPTTAPA 128
>U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein (
Caenorhabditis elegansN2 basic-helix-loop-helix
transcription factor E12/47homolog mRNA, complete cds.
).
Length = 399
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 403 ATSLLAPTSLPTPTSQVALLEPLPTRHPS 489
+TS AP++ P PTS +LE PT P+
Sbjct: 100 STSTTAPSTAPAPTSTTDVLELKPTTAPA 128
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/92 (20%), Positives = 33/92 (35%)
Frame = +3
Query: 261 SPVVATTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNT 440
+P TT T +T+ + T + P + + + + ++ TP T
Sbjct: 167 TPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTT 226
Query: 441 YIASGPLGATTYTTPFVQTVPIASTASLPVAT 536
+ TT TTP T P +T+ T
Sbjct: 227 TTTTTTTPTTTTTTPTTTTTPATTTSETTTTT 258
>Z79759-2|CAB02137.1| 255|Caenorhabditis elegans Hypothetical
protein ZK858.2 protein.
Length = 255
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +3
Query: 138 SVVHPSPLVYSTPYGYTHFIKKRSAPLAHAAYIAPVAYSAISPVVATTYHGKTPLL 305
S++ P+ P Y I +A ++P + I +V T YH TP+L
Sbjct: 16 SLLATPPVAIRRPLPYPRDIISSPLEVATPVTVSPTDFMPIRELVTTPYHISTPVL 71
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 4.9
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 17/115 (14%)
Frame = +3
Query: 234 IAPVAYSAI---SPVVATTYHGKTPLL---ASTSYVSSTPLISQPIAYSAHFIKKRSPQW 395
+APV+ S +P+ +++ G T + +S++Y SSTP S A +A I +
Sbjct: 216 VAPVSSSTFGSSTPIASSSSSGSTVTVVSGSSSTYGSSTPSASSSSAGTASTISGSTGST 275
Query: 396 PVSYIAPSSYITPNTYIAS-----------GPLGATTYTTPFVQTVPIASTASLP 527
SS + +T AS GP G+T P T P S++ P
Sbjct: 276 ATIVPGSSSSVGSSTQSASPSSPGTMSTVSGPTGSTVTVVPGSSTSPAPSSSPNP 330
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 28.3 bits (60), Expect = 4.9
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 17/115 (14%)
Frame = +3
Query: 234 IAPVAYSAI---SPVVATTYHGKTPLL---ASTSYVSSTPLISQPIAYSAHFIKKRSPQW 395
+APV+ S +P+ +++ G T + +S++Y SSTP S A +A I +
Sbjct: 423 VAPVSSSTFGSSTPIASSSSSGSTVTVVSGSSSTYGSSTPSASSSSAGTASTISGSTGST 482
Query: 396 PVSYIAPSSYITPNTYIAS-----------GPLGATTYTTPFVQTVPIASTASLP 527
SS + +T AS GP G+T P T P S++ P
Sbjct: 483 ATIVPGSSSSVGSSTQSASPSSPGTMSTVSGPTGSTVTVVPGSSTSPAPSSSPNP 537
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 4.9
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 17/115 (14%)
Frame = +3
Query: 234 IAPVAYSAI---SPVVATTYHGKTPLL---ASTSYVSSTPLISQPIAYSAHFIKKRSPQW 395
+APV+ S +P+ +++ G T + +S++Y SSTP S A +A I +
Sbjct: 423 VAPVSSSTFGSSTPIASSSSSGSTVTVVSGSSSTYGSSTPSASSSSAGTASTISGSTGST 482
Query: 396 PVSYIAPSSYITPNTYIAS-----------GPLGATTYTTPFVQTVPIASTASLP 527
SS + +T AS GP G+T P T P S++ P
Sbjct: 483 ATIVPGSSSSVGSSTQSASPSSPGTMSTVSGPTGSTVTVVPGSSTSPAPSSSPNP 537
>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical
protein C09H6.1b protein.
Length = 1309
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 7/62 (11%)
Frame = +2
Query: 476 HDTLRADRADRIDCITSRRNSSDQEEVCTR------SGHN-LHRTYYLHRCSARSFFSSI 634
HDT A R C+T + + T S H HRTYYL C FF
Sbjct: 476 HDTKTAFPQHRFLCLTCGHRAKSYAALRTHKLIEHTSTHKRFHRTYYLKECVGDKFFVKY 535
Query: 635 QL 640
L
Sbjct: 536 NL 537
>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical
protein C09H6.1a protein.
Length = 1311
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 7/62 (11%)
Frame = +2
Query: 476 HDTLRADRADRIDCITSRRNSSDQEEVCTR------SGHN-LHRTYYLHRCSARSFFSSI 634
HDT A R C+T + + T S H HRTYYL C FF
Sbjct: 476 HDTKTAFPQHRFLCLTCGHRAKSYAALRTHKLIEHTSTHKRFHRTYYLKECVGDKFFVKY 535
Query: 635 QL 640
L
Sbjct: 536 NL 537
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 207 SAPLAHAAYIAPVAYSAISPVVATTYHGKTPLLASTSYVSSTPLISQ 347
+AP+ ++ PV + I+PV + KT +++S +S+P+ S+
Sbjct: 444 TAPVTKSSSTPPVKSTTIAPVTMPSTTEKTTFTSTSSSTTSSPVCSK 490
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 207 SAPLAHAAYIAPVAYSAISPVVATTYHGKTPLLASTSYVSSTPLISQ 347
+AP+ ++ PV + I+PV + KT +++S +S+P+ S+
Sbjct: 407 TAPVTKSSSTPPVKSTTIAPVTMPSTTEKTTFTSTSSSTTSSPVCSK 453
>U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical
protein F56D3.1 protein.
Length = 441
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 432 PNTYIASGPLGATTYTT-PFVQTVPIASTASLPVA 533
P T + P ATT T PFVQT P A+ A+LP A
Sbjct: 114 PTTIRTTRPPPATTIRTIPFVQTTP-ATFATLPPA 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,527,501
Number of Sequences: 27780
Number of extensions: 271676
Number of successful extensions: 940
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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