Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1569
         (712 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma j...    44   0.003
UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila m...    44   0.003
UniRef50_Q4YAZ4 Cluster: Putative uncharacterized protein; n=1; ...    43   0.006
UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1; Planta...    42   0.015
UniRef50_Q86SD1 Cluster: Calumenin homologue; n=2; Eukaryota|Rep...    39   0.11 
UniRef50_A2ELX1 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  
UniRef50_A0DMX7 Cluster: Chromosome undetermined scaffold_57, wh...    33   9.2  

>UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma
          japonicum|Rep: SJCHGC09205 protein - Schistosoma
          japonicum (Blood fluke)
          Length = 215

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +1

Query: 16 STAVAAALELVDPPGCRNSA 75
          STAVAAALELVDPPGCRNSA
Sbjct: 4  STAVAAALELVDPPGCRNSA 23


>UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila
          melanogaster|Rep: Elastin like protein - Drosophila
          melanogaster (Fruit fly)
          Length = 110

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +1

Query: 16 STAVAAALELVDPPGCRNSA 75
          STAVAAALELVDPPGCRNSA
Sbjct: 3  STAVAAALELVDPPGCRNSA 22


>UniRef50_Q4YAZ4 Cluster: Putative uncharacterized protein; n=1;
          Plasmodium berghei|Rep: Putative uncharacterized
          protein - Plasmodium berghei
          Length = 89

 Score = 43.2 bits (97), Expect = 0.006
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = +1

Query: 4  ESRCSTAVAAALELVDPPGCRNS 72
          +S  STAVAAALELVDPPGCRNS
Sbjct: 6  KSWSSTAVAAALELVDPPGCRNS 28


>UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1;
          Plantago major|Rep: Plasma memebrane H+-ATPase -
          Plantago major (Common plantain)
          Length = 106

 Score = 41.9 bits (94), Expect = 0.015
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = +1

Query: 16 STAVAAALELVDPPGCRNSA 75
          S AVAAALELVDPPGCRNSA
Sbjct: 4  SPAVAAALELVDPPGCRNSA 23


>UniRef50_Q86SD1 Cluster: Calumenin homologue; n=2; Eukaryota|Rep:
           Calumenin homologue - Ciona intestinalis (Transparent
           sea squirt)
          Length = 308

 Score = 39.1 bits (87), Expect = 0.11
 Identities = 18/21 (85%), Positives = 19/21 (90%)
 Frame = +1

Query: 4   ESRCSTAVAAALELVDPPGCR 66
           +S  STAVAAALELVDPPGCR
Sbjct: 119 KSWSSTAVAAALELVDPPGCR 139


>UniRef50_A2ELX1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 820

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +1

Query: 277 NLIMTSEPMWKQESSKKLTSNSPTRRHIRTLKQNDTIITLLFELSI 414
           ++++ S P W ++ S K+T+ S   R I+ L QN+      F+LS+
Sbjct: 609 SILIDSAPKWIRQCSSKITTQSVLTRQIKQLFQNNIEPEETFQLSV 654


>UniRef50_A0DMX7 Cluster: Chromosome undetermined scaffold_57, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_57,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 105

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -3

Query: 287 IIKFVISSDRLHDVIAKITHNIIYFILICMNLFYRVSELWTYEIFIFN 144
           II F  SS   H +I    H      L C  L +++   WT ++FIF+
Sbjct: 20  IINFTFSSYLQHSIIFVQRHIKKEIYLNCFTLIFKLQHPWTLQLFIFH 67


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,542,062
Number of Sequences: 1657284
Number of extensions: 9889549
Number of successful extensions: 24716
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24701
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)