Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1569
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   2.5  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   2.5  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    23   2.5  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   2.5  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   9.9  

>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 1   FESRCSTAVAAALELVDPPGCRNSA 75
           F S  S+A+AAA++      CR +A
Sbjct: 31  FSSTASSALAAAVDAATDKSCRYTA 55


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 1   FESRCSTAVAAALELVDPPGCRNSA 75
           F S  S+A+AAA++      CR +A
Sbjct: 90  FSSTASSALAAAVDAATDKSCRYTA 114


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 1   FESRCSTAVAAALELVDPPGCRNSA 75
           F S  S+A+AAA++      CR +A
Sbjct: 31  FSSTASSALAAAVDAATDKSCRYTA 55


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 1   FESRCSTAVAAALELVDPPGCRNSA 75
           F S  S+A+AAA++      CR +A
Sbjct: 90  FSSTASSALAAAVDAATDKSCRYTA 114


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -3

Query: 632 ISPTSDRSTPCPDSLHHPL 576
           + P      P  D LHHP+
Sbjct: 28  VQPLPRHFNPPSDKLHHPI 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,843
Number of Sequences: 336
Number of extensions: 2653
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)