Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1569
         (712 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like p...    44   2e-04
AE014297-231|AAN13278.1|  687|Drosophila melanogaster CG16708-PB...    31   1.2  
AE014297-230|AAF52040.2|  687|Drosophila melanogaster CG16708-PA...    31   1.2  
DQ418878-1|ABD77422.1| 1765|Drosophila melanogaster echinus spli...    30   3.6  
AL031130-3|CAA20016.1| 1761|Drosophila melanogaster EG:EG0002.3 ...    30   3.6  
BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p pro...    29   6.2  
AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB...    29   6.2  
AY069550-1|AAL39695.1|  535|Drosophila melanogaster LD27564p pro...    29   8.2  
AE014297-4249|AAF56802.2|  535|Drosophila melanogaster CG9986-PA...    29   8.2  

>X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like
          protein protein.
          Length = 110

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = +1

Query: 16 STAVAAALELVDPPGCRNSA 75
          STAVAAALELVDPPGCRNSA
Sbjct: 3  STAVAAALELVDPPGCRNSA 22


>AE014297-231|AAN13278.1|  687|Drosophila melanogaster CG16708-PB,
           isoform B protein.
          Length = 687

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
 Frame = +1

Query: 241 AMTSCNLSELITNLIMTSEP----MWKQESSKKLTSNSPTRRHIRTL 369
           + T CN  EL       S+P     W QE   +L S+SPTR  +R L
Sbjct: 160 SQTDCNRWELRRLTFFNSDPYIVRQWDQELQIRLHSSSPTRMRVRRL 206


>AE014297-230|AAF52040.2|  687|Drosophila melanogaster CG16708-PA,
           isoform A protein.
          Length = 687

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
 Frame = +1

Query: 241 AMTSCNLSELITNLIMTSEP----MWKQESSKKLTSNSPTRRHIRTL 369
           + T CN  EL       S+P     W QE   +L S+SPTR  +R L
Sbjct: 160 SQTDCNRWELRRLTFFNSDPYIVRQWDQELQIRLHSSSPTRMRVRRL 206


>DQ418878-1|ABD77422.1| 1765|Drosophila melanogaster echinus splice
           form 3 protein.
          Length = 1765

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 629 SPTSDRSTPCPDSLHHPLTRINHKLRN 549
           SPTS  S P P   HHP  ++ H + N
Sbjct: 38  SPTSPVSVPVPVQAHHPHPQLGHLISN 64


>AL031130-3|CAA20016.1| 1761|Drosophila melanogaster EG:EG0002.3
           protein.
          Length = 1761

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 629 SPTSDRSTPCPDSLHHPLTRINHKLRN 549
           SPTS  S P P   HHP  ++ H + N
Sbjct: 38  SPTSPVSVPVPVQAHHPHPQLGHLISN 64


>BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p
           protein.
          Length = 1047

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +2

Query: 521 LRQIEYSCLNYGVYDLF--ELEDDVGCPGTEYC 613
           L++ E  C+N G++ +F  +++ D  CPG E C
Sbjct: 341 LKECEGECMN-GIFAIFCDDIDSDAFCPGEESC 372


>AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB
           protein.
          Length = 1047

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +2

Query: 521 LRQIEYSCLNYGVYDLF--ELEDDVGCPGTEYC 613
           L++ E  C+N G++ +F  +++ D  CPG E C
Sbjct: 341 LKECEGECMN-GIFAIFCDDIDSDAFCPGEESC 372


>AY069550-1|AAL39695.1|  535|Drosophila melanogaster LD27564p
           protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 340 SPTRRHIRTLKQNDTIITLLFELSIIYFNVHIDLRENLNGPSSMS 474
           SPT++ +  LK  D  IT    LS  +   H+   E +N PS ++
Sbjct: 382 SPTKKSVPRLKTGDFFITKHSNLSQTHVIFHLISDEPINSPSEIN 426


>AE014297-4249|AAF56802.2|  535|Drosophila melanogaster CG9986-PA
           protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 340 SPTRRHIRTLKQNDTIITLLFELSIIYFNVHIDLRENLNGPSSMS 474
           SPT++ +  LK  D  IT    LS  +   H+   E +N PS ++
Sbjct: 382 SPTKKSVPRLKTGDFFITKHSNLSQTHVIFHLISDEPINSPSEIN 426


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,256,479
Number of Sequences: 53049
Number of extensions: 462164
Number of successful extensions: 1043
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)