Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1569
(712 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 25 0.71
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 25 0.71
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 6.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 6.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 6.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 6.6
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 22 6.6
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 21 8.7
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 21 8.7
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 21 8.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 8.7
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 21 8.7
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 25.0 bits (52), Expect = 0.71
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 82 PRPPNSCSPGDPLVLERPPPR 20
PR P PGD + +RP PR
Sbjct: 913 PRSPGRAWPGDSDIRQRPIPR 933
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 25.0 bits (52), Expect = 0.71
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 340 SPTRRHIRTLKQNDTIITLLF-ELSIIYFNVHIDLRENLN 456
SP RH+ TL + +T +TL+ E+S D++ LN
Sbjct: 749 SPDSRHLVTLDKQETGVTLVVQEISSDGLKFAFDVKTTLN 788
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 251 DVIAKITHNIIYFILI 204
DVIA+IT + YF+ +
Sbjct: 463 DVIARITFPVAYFMFL 478
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 251 DVIAKITHNIIYFILI 204
DVIA+IT + YF+ +
Sbjct: 449 DVIARITFPVAYFMFL 464
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 251 DVIAKITHNIIYFILI 204
DVIA+IT + YF+ +
Sbjct: 483 DVIARITFPVAYFMFL 498
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 251 DVIAKITHNIIYFILI 204
DVIA+IT + YF+ +
Sbjct: 432 DVIARITFPVAYFMFL 447
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +2
Query: 311 RNLQKSLHLIH 343
RNL+KSL++IH
Sbjct: 26 RNLEKSLNVIH 36
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 21.4 bits (43), Expect = 8.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 572 ELEDDVGCPGTEYCG 616
ELE+ + PGT +CG
Sbjct: 24 ELEERIIYPGTLWCG 38
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.4 bits (43), Expect = 8.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 572 ELEDDVGCPGTEYCG 616
ELE+ + PGT +CG
Sbjct: 29 ELEERIIYPGTLWCG 43
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 21.4 bits (43), Expect = 8.7
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 349 RRHIRTLKQNDTIITLLFELSIIYFNVHIDLREN 450
R+H + L +N + T++ +L + F+ D+R N
Sbjct: 284 RKHEQRLLRNVGVHTVVLDLLQVPFDAKEDVRMN 317
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 8.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 289 TSEPMWKQESSKKLTSNSP 345
T+E MW+ ++KLT P
Sbjct: 1088 TNEEMWELIDTEKLTDRLP 1106
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.4 bits (43), Expect = 8.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 572 ELEDDVGCPGTEYCG 616
ELE+ + PGT +CG
Sbjct: 29 ELEERIIYPGTLWCG 43
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,042
Number of Sequences: 438
Number of extensions: 2828
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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