Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1566
(601 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456958-1|CAG33239.1| 611|Homo sapiens EIF4B protein. 34 0.44
BC098437-1|AAH98437.1| 611|Homo sapiens eukaryotic translation ... 34 0.44
BC073154-1|AAH73154.1| 611|Homo sapiens eukaryotic translation ... 34 0.44
BC073139-1|AAH73139.1| 611|Homo sapiens eukaryotic translation ... 34 0.44
BC001097-1|AAH01097.1| 349|Homo sapiens EIF4B protein protein. 34 0.44
AK222528-1|BAD96248.1| 611|Homo sapiens eukaryotic translation ... 34 0.44
AB076839-1|BAB82380.1| 611|Homo sapiens eukaryotic initiation f... 34 0.44
X55733-1|CAA39265.1| 611|Homo sapiens initation factor 4B protein. 33 0.58
X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1) ribonucleopro... 31 2.3
X07401-1|CAA30303.1| 285|Homo sapiens hU1-70K protein (286 AA) ... 31 2.3
X06814-1|CAA29963.1| 233|Homo sapiens protein ( Human mRNA for ... 31 2.3
X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for ... 31 2.3
M60502-1|AAA63248.1| 797|Homo sapiens profilaggrin protein. 31 2.3
M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen... 31 2.3
M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen... 31 2.3
M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small ... 31 2.3
BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear ribonucle... 31 2.3
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 31 2.3
AL117507-1|CAB55969.1| 341|Homo sapiens hypothetical protein pr... 31 2.3
M60499-1|AAA63246.1| 465|Homo sapiens profilaggrin protein. 31 3.1
AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein. 31 3.1
M96982-1|AAA36619.1| 240|Homo sapiens U2 snRNP auxiliary factor... 31 4.1
M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein. 31 4.1
BC023569-1|AAH23569.1| 443|Homo sapiens UPF3 regulator of nonse... 31 4.1
BC005915-1|AAH05915.1| 167|Homo sapiens U2 small nuclear RNA au... 31 4.1
BC001923-1|AAH01923.1| 240|Homo sapiens U2 small nuclear RNA au... 31 4.1
BC001177-1|AAH01177.1| 240|Homo sapiens U2 small nuclear RNA au... 31 4.1
AY013250-1|AAG48510.1| 476|Homo sapiens hUPF3A protein. 31 4.1
AP001748-2|BAA95534.1| 240|Homo sapiens U2 snRNP auxiliary fact... 31 4.1
AL160396-6|CAM22288.1| 443|Homo sapiens UPF3 regulator of nonse... 31 4.1
AL160396-5|CAI15816.1| 476|Homo sapiens UPF3 regulator of nonse... 31 4.1
AJ627978-1|CAF29556.1| 240|Homo sapiens U2 snRNP auxiliary fact... 31 4.1
AF318575-1|AAG60690.1| 452|Homo sapiens UPF3 protein. 31 4.1
AF272349-1|AAL36980.1| 193|Homo sapiens quaking protein 3 protein. 30 5.4
U29727-1|AAA82933.1| 816|Homo sapiens BMK1 gamma kinase protein. 30 7.1
U29726-1|AAA82932.1| 816|Homo sapiens BMK1 beta kinase protein. 30 7.1
U29725-1|AAA82931.1| 816|Homo sapiens BMK1 alpha kinase protein. 30 7.1
U25278-1|AAA81381.1| 815|Homo sapiens ERK5 protein. 30 7.1
BC030134-1|AAH30134.1| 816|Homo sapiens mitogen-activated prote... 30 7.1
BC009963-1|AAH09963.1| 816|Homo sapiens mitogen-activated prote... 30 7.1
BC007992-1|AAH07992.1| 677|Homo sapiens mitogen-activated prote... 30 7.1
BC007404-1|AAH07404.1| 677|Homo sapiens mitogen-activated prote... 30 7.1
AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318... 30 7.1
AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318... 30 7.1
AF043380-1|AAC23559.1| 322|Homo sapiens epidermal filaggrin pro... 30 7.1
AB058686-1|BAB47412.1| 1560|Homo sapiens KIAA1783 protein protein. 30 7.1
M96943-1|AAA36487.1| 1218|Homo sapiens profilaggrin protein. 29 9.4
M60494-1|AAA63244.1| 990|Homo sapiens profilaggrin protein. 29 9.4
AJ406935-1|CAC27574.1| 98|Homo sapiens keratin associated prot... 29 9.4
AB209439-1|BAD92676.1| 267|Homo sapiens sorting nexin 15 isofor... 29 9.4
AB208881-1|BAD92118.1| 583|Homo sapiens PREDICTED: filaggrin va... 29 9.4
AB032947-1|BAA86435.2| 1390|Homo sapiens KIAA1121 protein protein. 29 9.4
>CR456958-1|CAG33239.1| 611|Homo sapiens EIF4B protein.
Length = 611
Score = 33.9 bits (74), Expect = 0.44
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 477 KEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRP---RERQQTACGGGGSQTELLPGSE 307
+E+LQ+ +QR+L+ +L+ + R ER S R +ER+++ G SQT S
Sbjct: 377 EERLQKEQEKLQRQLDEPKLERRPR--ERHPSWRSEETQERERSRTGSESSQTGTSTTSS 434
Query: 306 RRGQRRPQE 280
R +RR E
Sbjct: 435 RNARRRESE 443
>BC098437-1|AAH98437.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 33.9 bits (74), Expect = 0.44
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 477 KEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRP---RERQQTACGGGGSQTELLPGSE 307
+E+LQ+ +QR+L+ +L+ + R ER S R +ER+++ G SQT S
Sbjct: 377 EERLQKEQEKLQRQLDEPKLERRPR--ERHPSWRSEETQERERSRTGSESSQTGTSTTSS 434
Query: 306 RRGQRRPQE 280
R +RR E
Sbjct: 435 RNARRRESE 443
>BC073154-1|AAH73154.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 33.9 bits (74), Expect = 0.44
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 477 KEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRP---RERQQTACGGGGSQTELLPGSE 307
+E+LQ+ +QR+L+ +L+ + R ER S R +ER+++ G SQT S
Sbjct: 377 EERLQKEQEKLQRQLDEPKLERRPR--ERHPSWRSEETQERERSRTGSESSQTGTSTTSS 434
Query: 306 RRGQRRPQE 280
R +RR E
Sbjct: 435 RNARRRESE 443
>BC073139-1|AAH73139.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 33.9 bits (74), Expect = 0.44
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 477 KEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRP---RERQQTACGGGGSQTELLPGSE 307
+E+LQ+ +QR+L+ +L+ + R ER S R +ER+++ G SQT S
Sbjct: 377 EERLQKEQEKLQRQLDEPKLERRPR--ERHPSWRSEETQERERSRTGSESSQTGTSTTSS 434
Query: 306 RRGQRRPQE 280
R +RR E
Sbjct: 435 RNARRRESE 443
>BC001097-1|AAH01097.1| 349|Homo sapiens EIF4B protein protein.
Length = 349
Score = 33.9 bits (74), Expect = 0.44
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 477 KEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRP---RERQQTACGGGGSQTELLPGSE 307
+E+LQ+ +QR+L+ +L+ + R ER S R +ER+++ G SQT S
Sbjct: 115 EERLQKEQEKLQRQLDEPKLERRPR--ERHPSWRSEETQERERSRTGSESSQTGTSTTSS 172
Query: 306 RRGQRRPQE 280
R +RR E
Sbjct: 173 RNARRRESE 181
>AK222528-1|BAD96248.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B variant protein.
Length = 611
Score = 33.9 bits (74), Expect = 0.44
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 477 KEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRP---RERQQTACGGGGSQTELLPGSE 307
+E+LQ+ +QR+L+ +L+ + R ER S R +ER+++ G SQT S
Sbjct: 377 EERLQKEQEKLQRQLDEPKLERRPR--ERHPSWRSEETQERERSRTGSESSQTGTSTTSS 434
Query: 306 RRGQRRPQE 280
R +RR E
Sbjct: 435 RNARRRESE 443
>AB076839-1|BAB82380.1| 611|Homo sapiens eukaryotic initiation
factor 4B protein.
Length = 611
Score = 33.9 bits (74), Expect = 0.44
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -2
Query: 477 KEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRP---RERQQTACGGGGSQTELLPGSE 307
+E+LQ+ +QR+L+ +L+ + R ER S R +ER+++ G SQT S
Sbjct: 377 EERLQKEQEKLQRQLDEPKLERRPR--ERHPSWRSEETQERERSRTGSESSQTGTSTTSS 434
Query: 306 RRGQRRPQE 280
R +RR E
Sbjct: 435 RNARRRESE 443
>X55733-1|CAA39265.1| 611|Homo sapiens initation factor 4B protein.
Length = 611
Score = 33.5 bits (73), Expect = 0.58
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = -2
Query: 477 KEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRP---RERQQTACGGGGSQTELLPGSE 307
+E+LQ+ +QR+ N +L+ + R ER S R +ER+++ G SQT S
Sbjct: 377 EERLQKEQEKLQRQWNEPKLERRPR--ERHPSWRSEETQERERSRTGSESSQTGTSTTSS 434
Query: 306 RRGQRRPQE 280
R +RR E
Sbjct: 435 RNARRRESE 443
>X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1)
ribonucleoprotein protein.
Length = 437
Score = 31.5 bits (68), Expect = 2.3
Identities = 24/97 (24%), Positives = 38/97 (39%)
Frame = -2
Query: 480 KKEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERR 301
K+E+ + ++ +R+R +SR RR+ RER++ GGGG E
Sbjct: 271 KEERRRSRERSKDKDRDRKRRSSRSRERARRE----RERKEELRGGGGDMAE----PSEA 322
Query: 300 GQRRPQECXXXXXXXXXXXXQESAGLERGRRLQEPHR 190
G P + E G +R R + HR
Sbjct: 323 GDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHR 359
>X07401-1|CAA30303.1| 285|Homo sapiens hU1-70K protein (286 AA)
protein.
Length = 285
Score = 31.5 bits (68), Expect = 2.3
Identities = 24/97 (24%), Positives = 38/97 (39%)
Frame = -2
Query: 480 KKEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERR 301
K+E+ + ++ +R+R +SR RR+ RER++ GGGG E
Sbjct: 119 KEERRRSRERSKDKDRDRKRRSSRSRERARRE----RERKEELRGGGGDMAE----PSEA 170
Query: 300 GQRRPQECXXXXXXXXXXXXQESAGLERGRRLQEPHR 190
G P + E G +R R + HR
Sbjct: 171 GDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHR 207
>X06814-1|CAA29963.1| 233|Homo sapiens protein ( Human mRNA for
hU1-70K small nuclear RNP protein (RNP12). ).
Length = 233
Score = 31.5 bits (68), Expect = 2.3
Identities = 24/97 (24%), Positives = 38/97 (39%)
Frame = -2
Query: 480 KKEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERR 301
K+E+ + ++ +R+R +SR RR+ RER++ GGGG E
Sbjct: 86 KEERRRSRERSKDKDRDRKRRSSRSRERARRE----RERKEELRGGGGDMAE----PSEA 137
Query: 300 GQRRPQECXXXXXXXXXXXXQESAGLERGRRLQEPHR 190
G P + E G +R R + HR
Sbjct: 138 GDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHR 174
>X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for U1
RNA-associated 70K protein. ).
Length = 614
Score = 31.5 bits (68), Expect = 2.3
Identities = 24/97 (24%), Positives = 38/97 (39%)
Frame = -2
Query: 480 KKEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERR 301
K+E+ + ++ +R+R +SR RR+ RER++ GGGG E
Sbjct: 448 KEERRRSRERSKDKDRDRKRRSSRSRERARRE----RERKEELRGGGGDMAE----PSEA 499
Query: 300 GQRRPQECXXXXXXXXXXXXQESAGLERGRRLQEPHR 190
G P + E G +R R + HR
Sbjct: 500 GDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHR 536
>M60502-1|AAA63248.1| 797|Homo sapiens profilaggrin protein.
Length = 797
Score = 31.5 bits (68), Expect = 2.3
Identities = 37/141 (26%), Positives = 49/141 (34%), Gaps = 9/141 (6%)
Frame = -3
Query: 428 GGDYRGRVGEGRDDRAVGHGSDNRPLAEVVVARQSFCLEVSGAGS--DDLRSVEGDTVNS 255
G + +GR D + G +RQ+ E SG GS R E +
Sbjct: 197 GSHHSHTTSQGRSDASRGQSGSRS------ASRQTHDQEQSGDGSRHSGSRHQEASSWAD 250
Query: 254 IQDDSRRVRGLREGGDCRNHTGS----DECSVVHSRSYQRRSMDHTGAVLGQRTNSRHDS 87
S+ V+G EG GS D S HS +RRS + G D
Sbjct: 251 SSRHSQAVQGQSEGSRTSRRQGSSVSQDSDSQGHSEDSERRSGSASRNHRGSAQEQSRDG 310
Query: 86 AVGQRSHH---TGLGDGGREN 33
+ RSHH G GD +
Sbjct: 311 SRHPRSHHEDRAGHGDSAESS 331
Score = 30.7 bits (66), Expect = 4.1
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = -3
Query: 242 SRRVRGLREGGDCRNHTGSDECSVVHSRSYQRRSMDHTGAVLGQRTNSRHDSAVGQRS 69
SR R + GD H+GS R S G G R + R S+V Q S
Sbjct: 546 SRETRNEEQSGDGSRHSGSRHHEASTQADSSRHSQSGQGESAGSRRSRRQGSSVSQDS 603
>M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen
protein.
Length = 428
Score = 31.5 bits (68), Expect = 2.3
Identities = 24/97 (24%), Positives = 38/97 (39%)
Frame = -2
Query: 480 KKEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERR 301
K+E+ + ++ +R+R +SR RR+ RER++ GGGG E
Sbjct: 262 KEERRRSRERSKDKDRDRKRRSSRSRERARRE----RERKEELRGGGGDMAE----PSEA 313
Query: 300 GQRRPQECXXXXXXXXXXXXQESAGLERGRRLQEPHR 190
G P + E G +R R + HR
Sbjct: 314 GDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHR 350
>M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen
protein.
Length = 437
Score = 31.5 bits (68), Expect = 2.3
Identities = 24/97 (24%), Positives = 38/97 (39%)
Frame = -2
Query: 480 KKEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERR 301
K+E+ + ++ +R+R +SR RR+ RER++ GGGG E
Sbjct: 271 KEERRRSRERSKDKDRDRKRRSSRSRERARRE----RERKEELRGGGGDMAE----PSEA 322
Query: 300 GQRRPQECXXXXXXXXXXXXQESAGLERGRRLQEPHR 190
G P + E G +R R + HR
Sbjct: 323 GDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHR 359
>M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small
nuclear ribonucleoprotein 70 kd protein mRNA, complete
cds. ).
Length = 437
Score = 31.5 bits (68), Expect = 2.3
Identities = 24/97 (24%), Positives = 38/97 (39%)
Frame = -2
Query: 480 KKEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERR 301
K+E+ + ++ +R+R +SR RR+ RER++ GGGG E
Sbjct: 271 KEERRRSRERSKDKDRDRKRRSSRSRERARRE----RERKEELRGGGGDMAE----PSEA 322
Query: 300 GQRRPQECXXXXXXXXXXXXQESAGLERGRRLQEPHR 190
G P + E G +R R + HR
Sbjct: 323 GDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHR 359
>BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear
ribonucleoprotein 70kDa polypeptide (RNP antigen)
protein.
Length = 437
Score = 31.5 bits (68), Expect = 2.3
Identities = 24/97 (24%), Positives = 38/97 (39%)
Frame = -2
Query: 480 KKEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERR 301
K+E+ + ++ +R+R +SR RR+ RER++ GGGG E
Sbjct: 271 KEERRRSRERSKDKDRDRKRRSSRSRERARRE----RERKEELRGGGGDMAE----PSEA 322
Query: 300 GQRRPQECXXXXXXXXXXXXQESAGLERGRRLQEPHR 190
G P + E G +R R + HR
Sbjct: 323 GDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHR 359
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 31.5 bits (68), Expect = 2.3
Identities = 19/62 (30%), Positives = 25/62 (40%)
Frame = -3
Query: 242 SRRVRGLREGGDCRNHTGSDECSVVHSRSYQRRSMDHTGAVLGQRTNSRHDSAVGQRSHH 63
SR+ R ++ GD H+GS R S G G RT+ S+V Q S
Sbjct: 1865 SRQTRNEKQSGDGSRHSGSRHHEASSRADSSRHSQVGQGQSSGPRTSRNQGSSVSQDSDS 1924
Query: 62 TG 57
G
Sbjct: 1925 QG 1926
Score = 31.1 bits (67), Expect = 3.1
Identities = 19/62 (30%), Positives = 24/62 (38%)
Frame = -3
Query: 242 SRRVRGLREGGDCRNHTGSDECSVVHSRSYQRRSMDHTGAVLGQRTNSRHDSAVGQRSHH 63
SR+ R + GD H+GS R S G G RT+ S+V Q S
Sbjct: 568 SRQTRNEEQSGDGTRHSGSRHHEASSQADSSRHSQVGQGQSSGPRTSRNQGSSVSQDSDS 627
Query: 62 TG 57
G
Sbjct: 628 QG 629
Score = 30.7 bits (66), Expect = 4.1
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = -3
Query: 242 SRRVRGLREGGDCRNHTGSDECSVVHSRSYQRRSMDHTGAVLGQRTNSRHDSAVGQRS 69
SR R + GD H+GS R S G G R + R S+V Q S
Sbjct: 3810 SRETRNEEQSGDGSRHSGSRHHEASTQADSSRHSQSGQGESAGSRRSRRQGSSVSQDS 3867
Score = 29.5 bits (63), Expect = 9.4
Identities = 19/62 (30%), Positives = 23/62 (37%)
Frame = -3
Query: 242 SRRVRGLREGGDCRNHTGSDECSVVHSRSYQRRSMDHTGAVLGQRTNSRHDSAVGQRSHH 63
SR R + GD H+GS R S G G R + R S+V Q S
Sbjct: 2838 SRTTRNEEQSGDGSRHSGSRHHEASTHADISRHSQAVQGQSEGSRRSRRQGSSVSQDSDS 2897
Query: 62 TG 57
G
Sbjct: 2898 EG 2899
>AL117507-1|CAB55969.1| 341|Homo sapiens hypothetical protein
protein.
Length = 341
Score = 31.5 bits (68), Expect = 2.3
Identities = 24/97 (24%), Positives = 38/97 (39%)
Frame = -2
Query: 480 KKEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERR 301
K+E+ + ++ +R+R +SR RR+ RER++ GGGG E
Sbjct: 175 KEERRRSRERSKDKDRDRKRRSSRSRERARRE----RERKEELRGGGGDMAE----PSEA 226
Query: 300 GQRRPQECXXXXXXXXXXXXQESAGLERGRRLQEPHR 190
G P + E G +R R + HR
Sbjct: 227 GDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHR 263
>M60499-1|AAA63246.1| 465|Homo sapiens profilaggrin protein.
Length = 465
Score = 31.1 bits (67), Expect = 3.1
Identities = 19/62 (30%), Positives = 24/62 (38%)
Frame = -3
Query: 242 SRRVRGLREGGDCRNHTGSDECSVVHSRSYQRRSMDHTGAVLGQRTNSRHDSAVGQRSHH 63
SR+ R + GD H+GS R S G G RT+ S+V Q S
Sbjct: 346 SRQTRNEEQSGDGTRHSGSRHHEASSQADSSRHSQVGQGQSSGPRTSRNQGSSVSQDSDS 405
Query: 62 TG 57
G
Sbjct: 406 QG 407
>AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein.
Length = 1943
Score = 31.1 bits (67), Expect = 3.1
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = -2
Query: 411 KSRRGERRQSCRP-----RERQQTACGGGGSQTELLPGSERRGQRRPQECXXXXXXXXXX 247
KS RG +R S RP RERQ A + LP E + QRR Q
Sbjct: 776 KSERGRQRLSARPPLREQRERQLRAEERQQREQRFLPEEEEKEQRRRQRREREKELQFLE 835
Query: 246 XXQESAGLERGRRLQE 199
++ ER ++LQE
Sbjct: 836 EEEQLQRRERAQQLQE 851
>M96982-1|AAA36619.1| 240|Homo sapiens U2 snRNP auxiliary factor
small subunit protein.
Length = 240
Score = 30.7 bits (66), Expect = 4.1
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = -2
Query: 450 PIQREL-----NRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERRGQRRP 286
PI REL RRR + +SR R + R R+R + GGGG G R +RR
Sbjct: 176 PISRELRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGG----GGGRERDRRRS 231
Query: 285 QE 280
++
Sbjct: 232 RD 233
>M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein.
Length = 1084
Score = 30.7 bits (66), Expect = 4.1
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = -3
Query: 242 SRRVRGLREGGDCRNHTGSDECSVVHSRSYQRRSMDHTGAVLGQRTNSRHDSAVGQRS 69
SR R + GD H+GS R S G G R + R S+V Q S
Sbjct: 833 SRETRNEEQSGDGSRHSGSRHHEASTQADSSRHSQSGQGESAGSRRSRRQGSSVSQDS 890
>BC023569-1|AAH23569.1| 443|Homo sapiens UPF3 regulator of nonsense
transcripts homolog A (yeast) protein.
Length = 443
Score = 30.7 bits (66), Expect = 4.1
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = -2
Query: 480 KKEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERR 301
KK++ + ++E+ R +L K +GE + +P+ER + GGG Q PG+ +
Sbjct: 231 KKKETDKQKKIAEKEV-RIKLLKKPEKGEEPTTEKPKERGEEIDTGGGKQESCAPGAVVK 289
Query: 300 GQRRPQE 280
RP E
Sbjct: 290 A--RPME 294
>BC005915-1|AAH05915.1| 167|Homo sapiens U2 small nuclear RNA
auxiliary factor 1 protein.
Length = 167
Score = 30.7 bits (66), Expect = 4.1
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = -2
Query: 450 PIQREL-----NRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERRGQRRP 286
PI REL RRR + +SR R + R R+R + GGGG G R +RR
Sbjct: 103 PISRELRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGG----GGGRERDRRRS 158
Query: 285 QE 280
++
Sbjct: 159 RD 160
>BC001923-1|AAH01923.1| 240|Homo sapiens U2 small nuclear RNA
auxiliary factor 1 protein.
Length = 240
Score = 30.7 bits (66), Expect = 4.1
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = -2
Query: 450 PIQREL-----NRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERRGQRRP 286
PI REL RRR + +SR R + R R+R + GGGG G R +RR
Sbjct: 176 PISRELRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGG----GGGRERDRRRS 231
Query: 285 QE 280
++
Sbjct: 232 RD 233
>BC001177-1|AAH01177.1| 240|Homo sapiens U2 small nuclear RNA
auxiliary factor 1 protein.
Length = 240
Score = 30.7 bits (66), Expect = 4.1
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = -2
Query: 450 PIQREL-----NRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERRGQRRP 286
PI REL RRR + +SR R + R R+R + GGGG G R +RR
Sbjct: 176 PISRELRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGG----GGGRERDRRRS 231
Query: 285 QE 280
++
Sbjct: 232 RD 233
>AY013250-1|AAG48510.1| 476|Homo sapiens hUPF3A protein.
Length = 476
Score = 30.7 bits (66), Expect = 4.1
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = -2
Query: 480 KKEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERR 301
KK++ + ++E+ R +L K +GE + +P+ER + GGG Q PG+ +
Sbjct: 264 KKKETDKQKKIAEKEV-RIKLLKKPEKGEEPTTEKPKERGEEIDTGGGKQESCAPGAVVK 322
Query: 300 GQRRPQE 280
RP E
Sbjct: 323 A--RPME 327
>AP001748-2|BAA95534.1| 240|Homo sapiens U2 snRNP auxiliary factor
small subunit protein.
Length = 240
Score = 30.7 bits (66), Expect = 4.1
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = -2
Query: 450 PIQREL-----NRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERRGQRRP 286
PI REL RRR + +SR R + R R+R + GGGG G R +RR
Sbjct: 176 PISRELRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGG----GGGRERDRRRS 231
Query: 285 QE 280
++
Sbjct: 232 RD 233
>AL160396-6|CAM22288.1| 443|Homo sapiens UPF3 regulator of nonsense
transcripts homolog A (yeast) protein.
Length = 443
Score = 30.7 bits (66), Expect = 4.1
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = -2
Query: 480 KKEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERR 301
KK++ + ++E+ R +L K +GE + +P+ER + GGG Q PG+ +
Sbjct: 231 KKKETDKQKKIAEKEV-RIKLLKKPEKGEEPTTEKPKERGEEIDTGGGKQESCAPGAVVK 289
Query: 300 GQRRPQE 280
RP E
Sbjct: 290 A--RPME 294
>AL160396-5|CAI15816.1| 476|Homo sapiens UPF3 regulator of nonsense
transcripts homolog A (yeast) protein.
Length = 476
Score = 30.7 bits (66), Expect = 4.1
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = -2
Query: 480 KKEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERR 301
KK++ + ++E+ R +L K +GE + +P+ER + GGG Q PG+ +
Sbjct: 264 KKKETDKQKKIAEKEV-RIKLLKKPEKGEEPTTEKPKERGEEIDTGGGKQESCAPGAVVK 322
Query: 300 GQRRPQE 280
RP E
Sbjct: 323 A--RPME 327
>AJ627978-1|CAF29556.1| 240|Homo sapiens U2 snRNP auxiliary factor
small subunit protein.
Length = 240
Score = 30.7 bits (66), Expect = 4.1
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = -2
Query: 450 PIQREL-----NRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERRGQRRP 286
PI REL RRR + +SR R + R R+R + GGGG G R +RR
Sbjct: 176 PISRELRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGG----GGGRERDRRRS 231
Query: 285 QE 280
++
Sbjct: 232 RD 233
>AF318575-1|AAG60690.1| 452|Homo sapiens UPF3 protein.
Length = 452
Score = 30.7 bits (66), Expect = 4.1
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = -2
Query: 480 KKEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERR 301
KK++ + ++E+ R +L K +GE + +P+ER + GGG Q PG+ +
Sbjct: 240 KKKETDKQKKIAEKEV-RIKLLKKPEKGEEPTTEKPKERGEEIDTGGGKQESCAPGAVVK 298
Query: 300 GQRRPQE 280
RP E
Sbjct: 299 A--RPME 303
>AF272349-1|AAL36980.1| 193|Homo sapiens quaking protein 3 protein.
Length = 193
Score = 30.3 bits (65), Expect = 5.4
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -2
Query: 429 RRRLQGKSRRG--ERRQSCRPRERQQTACGGGGSQTELLP-GSERRGQRRP 286
RR +G++ G ERR+ R R ++ACGG S P GS R +R P
Sbjct: 55 RRPREGRAEPGGRERRRLGARRARAESACGGRASARCRPPRGSAREPEREP 105
>U29727-1|AAA82933.1| 816|Homo sapiens BMK1 gamma kinase protein.
Length = 816
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 444 QRELNRRRLQGKSRRGERRQSCRPRERQQTACG-GGGSQTELLPG 313
+RE RRR Q +++ E+R+ + RER++ G GG T+ L G
Sbjct: 516 EREEKRRRRQERAKEREKRR--QERERKERGAGASGGPSTDPLAG 558
>U29726-1|AAA82932.1| 816|Homo sapiens BMK1 beta kinase protein.
Length = 816
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 444 QRELNRRRLQGKSRRGERRQSCRPRERQQTACG-GGGSQTELLPG 313
+RE RRR Q +++ E+R+ + RER++ G GG T+ L G
Sbjct: 516 EREEKRRRRQERAKEREKRR--QERERKERGAGASGGPSTDPLAG 558
>U29725-1|AAA82931.1| 816|Homo sapiens BMK1 alpha kinase protein.
Length = 816
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 444 QRELNRRRLQGKSRRGERRQSCRPRERQQTACG-GGGSQTELLPG 313
+RE RRR Q +++ E+R+ + RER++ G GG T+ L G
Sbjct: 516 EREEKRRRRQERAKEREKRR--QERERKERGAGASGGPSTDPLAG 558
>U25278-1|AAA81381.1| 815|Homo sapiens ERK5 protein.
Length = 815
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 444 QRELNRRRLQGKSRRGERRQSCRPRERQQTACG-GGGSQTELLPG 313
+RE RRR Q +++ E+R+ + RER++ G GG T+ L G
Sbjct: 515 EREEKRRRRQERAKEREKRR--QERERKERGAGASGGPSTDPLAG 557
>BC030134-1|AAH30134.1| 816|Homo sapiens mitogen-activated protein
kinase 7 protein.
Length = 816
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 444 QRELNRRRLQGKSRRGERRQSCRPRERQQTACG-GGGSQTELLPG 313
+RE RRR Q +++ E+R+ + RER++ G GG T+ L G
Sbjct: 516 EREEKRRRRQERAKEREKRR--QERERKERGAGASGGPSTDPLAG 558
>BC009963-1|AAH09963.1| 816|Homo sapiens mitogen-activated protein
kinase 7 protein.
Length = 816
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 444 QRELNRRRLQGKSRRGERRQSCRPRERQQTACG-GGGSQTELLPG 313
+RE RRR Q +++ E+R+ + RER++ G GG T+ L G
Sbjct: 516 EREEKRRRRQERAKEREKRR--QERERKERGAGASGGPSTDPLAG 558
>BC007992-1|AAH07992.1| 677|Homo sapiens mitogen-activated protein
kinase 7 protein.
Length = 677
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 444 QRELNRRRLQGKSRRGERRQSCRPRERQQTACG-GGGSQTELLPG 313
+RE RRR Q +++ E+R+ + RER++ G GG T+ L G
Sbjct: 377 EREEKRRRRQERAKEREKRR--QERERKERGAGASGGPSTDPLAG 419
>BC007404-1|AAH07404.1| 677|Homo sapiens mitogen-activated protein
kinase 7 protein.
Length = 677
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 444 QRELNRRRLQGKSRRGERRQSCRPRERQQTACG-GGGSQTELLPG 313
+RE RRR Q +++ E+R+ + RER++ G GG T+ L G
Sbjct: 377 EREEKRRRRQERAKEREKRR--QERERKERGAGASGGPSTDPLAG 419
>AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318
protein.
Length = 2279
Score = 29.9 bits (64), Expect = 7.1
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 244 SSWM-LLTVSPSTLLRSSLPAPLTSRQKLCLAT 339
S WM ++T S T +R +LP P T +K C AT
Sbjct: 1334 SPWMPVVTTSTQTKIRPNLPIPSTVLRKSCSAT 1366
>AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318
protein.
Length = 2279
Score = 29.9 bits (64), Expect = 7.1
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 244 SSWM-LLTVSPSTLLRSSLPAPLTSRQKLCLAT 339
S WM ++T S T +R +LP P T +K C AT
Sbjct: 1334 SPWMPVVTTSTQTKIRPNLPIPSTVLRKSCSAT 1366
>AF043380-1|AAC23559.1| 322|Homo sapiens epidermal filaggrin
protein.
Length = 322
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/56 (30%), Positives = 23/56 (41%)
Frame = -3
Query: 242 SRRVRGLREGGDCRNHTGSDECSVVHSRSYQRRSMDHTGAVLGQRTNSRHDSAVGQ 75
SR+ R + GD H+GS R S G G +T+ R S+V Q
Sbjct: 100 SRQTRNEEQSGDGSRHSGSRHHEASTRAGSSRHSQVGQGESAGSKTSRRQGSSVSQ 155
>AB058686-1|BAB47412.1| 1560|Homo sapiens KIAA1783 protein protein.
Length = 1560
Score = 29.9 bits (64), Expect = 7.1
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = +3
Query: 141 GSPLVAPAVYNAALIAPGVVPA----VAALSQAPHSPAVVLDAVNGVP-LDTPEVVAARA 305
G P+V P + PG+VPA + A+ P PA+V+ +P LD ++ +
Sbjct: 848 GYPMVYPGMIQMPAYQPGMVPAPMPMMPAMGTVPAMPAMVVPPQPPLPSLDAGQLAVQQQ 907
Query: 306 AHFQAKAL 329
Q +AL
Sbjct: 908 NFIQQQAL 915
>M96943-1|AAA36487.1| 1218|Homo sapiens profilaggrin protein.
Length = 1218
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = -3
Query: 242 SRRVRGLREGGDCRNHTGSDECSVVHSRSYQRRSMDHTGAVLGQRTNSRHDSAVGQ 75
SR+ R + GD H+GS R S G G RT+ S+V Q
Sbjct: 892 SRQTRDEEQSGDGTRHSGSHHQEASTQADSSRHSQVGQGQSAGSRTSRNQGSSVSQ 947
>M60494-1|AAA63244.1| 990|Homo sapiens profilaggrin protein.
Length = 990
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = -3
Query: 242 SRRVRGLREGGDCRNHTGSDECSVVHSRSYQRRSMDHTGAVLGQRTNSRHDSAVGQ 75
SR+ R + GD H+GS R S G G RT+ S+V Q
Sbjct: 670 SRQTRDEEQSGDGTRHSGSHHQEASTQADSSRHSQVGQGQSAGSRTSRNQGSSVSQ 725
>AJ406935-1|CAC27574.1| 98|Homo sapiens keratin associated protein
4.3 protein.
Length = 98
Score = 29.5 bits (63), Expect = 9.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 158 SCCVQRCTHRSRCGSCSRRPLSSP 229
+CC+ C H S C S R P S P
Sbjct: 56 ACCISSCCHPSCCVSSCRCPFSCP 79
>AB209439-1|BAD92676.1| 267|Homo sapiens sorting nexin 15 isoform B
variant protein.
Length = 267
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 408 SRRG-ERRQSCRPRERQQTACGGGGSQTELLPGSERRGQRRPQEC 277
S+ G E Q R + R GGG S T LL +G+ PQ+C
Sbjct: 218 SKEGNELGQPGRSQGRTSLGQGGGQSPTSLLSACADQGETSPQQC 262
>AB208881-1|BAD92118.1| 583|Homo sapiens PREDICTED: filaggrin
variant protein.
Length = 583
Score = 29.5 bits (63), Expect = 9.4
Identities = 19/62 (30%), Positives = 23/62 (37%)
Frame = -3
Query: 242 SRRVRGLREGGDCRNHTGSDECSVVHSRSYQRRSMDHTGAVLGQRTNSRHDSAVGQRSHH 63
SR R + GD H+GS R S G G R + R S+V Q S
Sbjct: 354 SRTTRNEEQSGDGSRHSGSRHHEASTHADISRHSQAVQGQSEGSRRSRRQGSSVSQDSDS 413
Query: 62 TG 57
G
Sbjct: 414 EG 415
>AB032947-1|BAA86435.2| 1390|Homo sapiens KIAA1121 protein protein.
Length = 1390
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 314 PGKSSVWLPPPPQAVCCRSRGLQ 382
PG++ LPP P C SRGLQ
Sbjct: 7 PGRADPRLPPAPPTFCTPSRGLQ 29
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,422,444
Number of Sequences: 237096
Number of extensions: 1712607
Number of successful extensions: 10934
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 10006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10890
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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