Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1564
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084156-3|AAK68489.1| 1334|Caenorhabditis elegans Hypothetical ... 40 0.001
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 33 0.16
U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical pr... 32 0.28
U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 31 0.49
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 31 0.49
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 31 0.49
Z66500-4|CAA91305.2| 630|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 30 1.5
U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set (trithorax/... 30 1.5
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 30 1.5
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 30 1.5
AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical... 30 1.5
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 29 2.0
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 29 2.0
U39678-7|AAK39210.1| 193|Caenorhabditis elegans Hypothetical pr... 29 2.6
U41109-1|ABC48251.1| 248|Caenorhabditis elegans Hypothetical pr... 29 3.4
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 28 6.0
U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical pr... 28 6.0
U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 6.0
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 28 6.0
AC024755-2|AAL65800.1| 498|Caenorhabditis elegans Hypothetical ... 28 6.0
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 7.9
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 27 7.9
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 27 7.9
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 27 7.9
U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical pr... 27 7.9
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 27 7.9
>AC084156-3|AAK68489.1| 1334|Caenorhabditis elegans Hypothetical
protein Y46E12BL.2 protein.
Length = 1334
Score = 40.3 bits (90), Expect = 0.001
Identities = 45/193 (23%), Positives = 79/193 (40%), Gaps = 12/193 (6%)
Frame = -2
Query: 598 KKAR-SQAWIQDDPENIVDLADVSASR---KITATNPRS-EQRTTELKSQRSK-DGGFRT 437
KK+R W++++ + V + + +SR +IT NP E+R + +R K + GF+
Sbjct: 1114 KKSRVGSVWLKNESDGDVPMDLLDSSRMMDQITTMNPAILEKRKKKALERRQKVEAGFQF 1173
Query: 436 APDGRLIISXXXXXXXXXXXXXXXXXXXXXXXXDNETQGG-----KPSKLLKPGTKRRYD 272
+ DG++I+ ++ + K K +K + D
Sbjct: 1174 SKDGKMIVLGDDEEDEDKKQIGKRKMRSGYDGLGDDDEDDEDGPTKGKKRVKENSDSE-D 1232
Query: 271 DILSIRSGRSNRSRASTATVGSKYKTGGKGIHRNLDSAASVASTLGGDYRPXXXXXXXXX 92
+ILS + A T + GGKGI+R+ + V S++G +
Sbjct: 1233 EILSDDDDDDDEKDAKTFVSRAAPSYGGKGIYRDTSGKSQVGSSVGAKRQQKQKPNKPKQ 1292
Query: 91 XXKH-DPYAYLPL 56
K PYAY+PL
Sbjct: 1293 QQKSVQPYAYVPL 1305
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 35.9 bits (79), Expect = 0.023
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 438 LPQTADSSSAT-RPSMMTTTNRSPAATLTRTPMTQTTKP 325
LP T +++ T +P+ TTT +PA T T+ P T TT P
Sbjct: 418 LPTTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTTTTTTP 456
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 435 PQTADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKPKAAS 313
P+ S + T P+ TTT + AT T P T PKAAS
Sbjct: 344 PRALTSRAPTGPACPTTTRSAAPATRTAVPPRATAPPKAAS 384
>U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical
protein T13C2.3a protein.
Length = 431
Score = 32.3 bits (70), Expect = 0.28
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 435 PQTADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKP 325
P T ++++T + TTT P T T P T T +P
Sbjct: 317 PSTTSTTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEP 353
>U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical
protein T13C2.3b protein.
Length = 506
Score = 32.3 bits (70), Expect = 0.28
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 435 PQTADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKP 325
P T ++++T + TTT P T T P T T +P
Sbjct: 392 PSTTSTTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEP 428
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 31.5 bits (68), Expect = 0.49
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = -3
Query: 486 ERLSLSRSGVRTAGSGLPQTADSSSATRPSMMTTTNRSPAATL----TRTPMTQTTKPKA 319
ER+S S + T + P T S++ RP + TT T+ TR P T+ + +A
Sbjct: 294 ERMSPSTTKTSTTTTAKPTTTRSTTTQRPQTVATTEAPTTTTVEDVTTRAPRTECERRRA 353
Query: 318 ASLRS 304
++ S
Sbjct: 354 SASSS 358
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 31.5 bits (68), Expect = 0.49
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -3
Query: 471 SRSGVRTAGS-GLPQTADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKP 325
S S V T GS PQ++ + S+T S TTT +PA + T T P
Sbjct: 819 STSSVITTGSTSAPQSSTAVSSTTTSPSTTTGSTPAPQSSTVASTTTVSP 868
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 31.5 bits (68), Expect = 0.49
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -3
Query: 528 PAGKSLLRIQEANRERLSLSRSGV-RTAGSGLPQTADSSSATRPSMMTTTNRSPAATLTR 352
P SL RIQ ++ + + S RT+ +G+P T S +T ++ TT +PA T
Sbjct: 578 PRDGSLWRIQCSHATTIRRATSTTTRTSRTGVPTTTSRSCST--TIWTTATTTPATAAT- 634
Query: 351 TPMTQTTKP 325
TP QT P
Sbjct: 635 TPAGQTPIP 643
>Z66500-4|CAA91305.2| 630|Caenorhabditis elegans Hypothetical
protein T05C12.4 protein.
Length = 630
Score = 30.7 bits (66), Expect = 0.85
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -3
Query: 453 TAGSGLPQTADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKPKAASLRSF 301
T + P+T +++ T + +TTT +P T TP++ T+K +S + F
Sbjct: 328 TTSTTTPRTTTTTTTT--TTITTTTSAPTTIATSTPISTTSKATTSSTQLF 376
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -3
Query: 414 SATRPSMMTTTNRSPAATLTRTPMTQTTKP 325
S +PS TTT +P T T TP T TT P
Sbjct: 81 SKPKPSTTTTTTTTPTTT-TTTPTTTTTTP 109
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3
Query: 453 TAGSGLPQTADSSSATRPSMMTTTNRSPAATLTRTPMTQTT 331
T + P T ++ T + TTT +P T T TP T TT
Sbjct: 96 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTT-TTTPTTTTT 135
>U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
b protein.
Length = 739
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = -2
Query: 607 RKRKKARSQAWIQDDPENIVDLADVSASRKITATNPRSEQRTTELKSQRSK 455
R+R+ + S IQ PE D++ S + ++T+ ++ T + KS++ K
Sbjct: 168 RRRRASFSSTSIQSSPERQRDVSSSSRTSSSSSTSSMKQEETADEKSRKRK 218
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = -2
Query: 607 RKRKKARSQAWIQDDPENIVDLADVSASRKITATNPRSEQRTTELKSQRSK 455
R+R+ + S IQ PE D++ S + ++T+ ++ T + KS++ K
Sbjct: 939 RRRRASFSSTSIQSSPERQRDVSSSSRTSSSSSTSSMKQEETADEKSRKRK 989
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = -2
Query: 607 RKRKKARSQAWIQDDPENIVDLADVSASRKITATNPRSEQRTTELKSQRSK 455
R+R+ + S IQ PE D++ S + ++T+ ++ T + KS++ K
Sbjct: 936 RRRRASFSSTSIQSSPERQRDVSSSSRTSSSSSTSSMKQEETADEKSRKRK 986
>AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical
protein Y73E7A.8 protein.
Length = 707
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 420 SSSATRPSMMTTTNRSPAATLTRTPMTQTTKPK 322
S T ++ TTT R T TP T TT+P+
Sbjct: 354 SPPTTTTTLQTTTTRPQTTKTTTTPQTTTTRPQ 386
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 417 SSATRPSMMTTTNRSPAATLTRTPMTQTTKP 325
++ RP+ TTT SPA +T T T T P
Sbjct: 20 TTTIRPNSTTTTTTSPAPNITTTTTTTTIAP 50
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 435 PQTADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKPKAA 316
P+ S + P+ TTT + AT T P T PKAA
Sbjct: 322 PRALTSRAPAGPARPTTTRSATPATRTAVPPRATAPPKAA 361
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = -3
Query: 504 IQEANRERLSLSRSGVRTAGSGLPQTADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKP 325
+++ ++ + S S ++ SG + SSS +R S +++ RS + R+P + T+P
Sbjct: 2 VEKEETKKRARSSSSSSSSSSGSSSSGSSSSGSRSSSSSSSGRSRS----RSPRRRDTRP 57
Query: 324 KAASLRS 304
A RS
Sbjct: 58 PARGGRS 64
>U39678-7|AAK39210.1| 193|Caenorhabditis elegans Hypothetical
protein C39D10.5 protein.
Length = 193
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -3
Query: 447 GSGLPQTADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKPK 322
G+ L Q +T+P ++++T P+A LT + +++ PK
Sbjct: 57 GTPLSQAVPEPDSTQPEVVSSTQPDPSAQLTGSRKRKSSSPK 98
>U41109-1|ABC48251.1| 248|Caenorhabditis elegans Hypothetical
protein F52E1.5 protein.
Length = 248
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 420 SSSATRPSMMTTTNRSPAATLTRTPMTQTT 331
SSS T P +TTT + +T T T T TT
Sbjct: 75 SSSTTSPKPITTTETTTRSTTTTTTTTTTT 104
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -3
Query: 453 TAGSGLPQTADSSSATRPSMMTTTNRSPAATLTRTPMT---QTTKPKAAS 313
T+GS P T + S +T P + TTT + T+TP T T+P S
Sbjct: 1269 TSGSSTP-TPNPSQSTSPVVSTTTGEMTSHGSTQTPSTIGSTVTQPSTVS 1317
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 429 TADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKP 325
T + + T+P+ TTT + T T T T TT P
Sbjct: 253 TTSTVTTTKPTTTTTTPTTTTTTPTTTTTTPTTTP 287
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 420 SSSATRPSMMTTTNRSPAATLTRTPMTQTTKP 325
++ +T S TTT + T T P T TT+P
Sbjct: 406 ATKSTSSSTTTTTTTTTTTTTTEAPTTTTTEP 437
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 420 SSSATRPSMMTTTNRSPAATLTRTPMTQTTKP 325
++ +T S TTT + T T P T TT+P
Sbjct: 406 ATKSTSSSTTTTTTTTTTTTTTEAPTTTTTEP 437
>U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical
protein T20F5.6 protein.
Length = 794
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 299 QKLRRLAALG-FVVCVIGVRVNVAAGLRFVVVIIEGLVADDESAV 430
++ RRL A+G FVV ++G N G+R + I+ +A ++ +
Sbjct: 414 ERFRRLGAVGGFVVPIVGRDANAPGGVRHLANEIDEFLAPNDQGL 458
>U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical
protein EEED8.11 protein.
Length = 304
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -3
Query: 435 PQTADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKPKAASLR 307
P T+ S+ T + TTT +P T T T T T +P ++
Sbjct: 60 PSTSTSTPTTTTTTTTTTTTTPTTT-TTTTTTTTPEPTTTKVK 101
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 438 LPQTADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKP 325
+P TA +SS T ++ TTT P +T P T T P
Sbjct: 264 VPSTAQTSSTTTVTVPTTTVTGPTTVVT-VPTTVVTIP 300
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -3
Query: 486 ERLSLSRSGVRTAGS--GLPQTADSSSATRPSMMTTTNRSPAATLTRTPMTQTT 331
+R+ L R+ T S +P T + +S T P TT+ + T T + TQTT
Sbjct: 237 DRIPLFRTTTTTHSSLTAVPGTTEETS-TEPETTTTSTTTTEPTTTTSTTTQTT 289
>AC024755-2|AAL65800.1| 498|Caenorhabditis elegans Hypothetical
protein Y34B4A.10 protein.
Length = 498
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -3
Query: 429 TADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKPKAAS 313
T + T P+ + T + T++ TP+ TT P A S
Sbjct: 271 TVPTEIVTEPTTESATTPTTTTTISTTPLVTTTPPTAQS 309
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 435 PQTADSSSATRPSMMTTTNRSPAATL-TRTPMTQTTKPKAASL 310
P T+ +++ + T T P TL T T T TT+P +++
Sbjct: 407 PSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTV 449
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 435 PQTADSSSATRPSMMTTTNRSPAATL-TRTPMTQTTKPKAASL 310
P T+ +++ + T T P TL T T T TT+P +++
Sbjct: 407 PSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTV 449
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 429 TADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKP 325
T +++++T TTT + T T P T TT+P
Sbjct: 200 TQETTTSTTAQPTTTTTATTTTTTTPLPTTTTTQP 234
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 453 TAGSGLPQTADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKP 325
TA TA +++ T P TTT + T T T TT+P
Sbjct: 208 TAQPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEP 250
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 429 TADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKP 325
T +++++T TTT + T T P T TT+P
Sbjct: 196 TQETTTSTTAQPTTTTTATTTTTTTPLPTTTTTQP 230
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 453 TAGSGLPQTADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKP 325
TA TA +++ T P TTT + T T T TT+P
Sbjct: 204 TAQPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEP 246
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 429 TADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKP 325
T +++++T TTT + T T P T TT+P
Sbjct: 139 TQETTTSTTAQPTTTTTATTTTTTTPLPTTTTTQP 173
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 453 TAGSGLPQTADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKP 325
TA TA +++ T P TTT + T T T TT+P
Sbjct: 147 TAQPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEP 189
>U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical
protein T26A8.1 protein.
Length = 708
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -3
Query: 465 SGVRTAGSGLPQTADSSSATRPSMMTTTNRSPAATLTRTPMTQTTKPKA 319
S V T S T S+++T + TTT +T T + T++P+A
Sbjct: 325 STVETTPSTSTTTTSSTTSTTTTTTTTTETPSTTVITTTIPSTTSEPEA 373
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 417 SSATRPSMMTTTNRSPAATLTRTPMTQTTKPKAASLRSF 301
+S RPS ++ R P TLT ++T P A + ++
Sbjct: 179 NSTKRPSTVSVHERKPKRTLTEILQRRSTAPAATGVATY 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,562,182
Number of Sequences: 27780
Number of extensions: 181818
Number of successful extensions: 1050
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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