Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1562
         (548 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr...    39   0.002
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr...    39   0.002
Z75550-4|CAA99923.2|  335|Caenorhabditis elegans Hypothetical pr...    27   6.7  
U39849-1|AAA81045.2|  332|Caenorhabditis elegans Serpentine rece...    27   6.7  
AF039716-4|AAB96739.1|  616|Caenorhabditis elegans Aminopeptidas...    27   6.7  
Z83239-8|CAH60787.1|  311|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z78416-7|CAI79151.1|  212|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AL132898-11|CAB60945.4|  552|Caenorhabditis elegans Hypothetical...    27   8.9  

>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical protein
            K08E4.1 protein.
          Length = 1208

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = -1

Query: 527  PQAGERVKVIAGEDRDAVGQLISIENQEGVVKFGTD--DIKIMQLRHLCKMAS 375
            PQ G+  +VI G+D    GQL+S++  E V++   D  D++++ +   CKM S
Sbjct: 1154 PQPGDDARVIFGQDAGHSGQLVSMDGFEAVIRSQEDMSDMRVINIGLCCKMHS 1206


>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical protein
            K08E4.1 protein.
          Length = 1208

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = -1

Query: 527  PQAGERVKVIAGEDRDAVGQLISIENQEGVVKFGTD--DIKIMQLRHLCKMAS 375
            PQ G+  +VI G+D    GQL+S++  E V++   D  D++++ +   CKM S
Sbjct: 1154 PQPGDDARVIFGQDAGHSGQLVSMDGFEAVIRSQEDMSDMRVINIGLCCKMHS 1206


>Z75550-4|CAA99923.2|  335|Caenorhabditis elegans Hypothetical
           protein T22C1.6 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 467 LISIENQEGVVKFGTDDIKIMQLRHLCK-MAS*FYRPVNTSQ 345
           ++++ NQE   K  T D KI  L +LC+ +      PV T++
Sbjct: 289 VLTMTNQEYAEKIATSDKKIQMLENLCRALRKGEQEPVTTAE 330


>U39849-1|AAA81045.2|  332|Caenorhabditis elegans Serpentine
           receptor, class h protein39 protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = +1

Query: 19  FINYFLCNKQQYLNISIDFFQILNVILMFLLLISFYSTSIHKVSFQFGASVF 174
           ++NYFLC   ++   +  F  + N +L+  +L+ F    + +V F  G S +
Sbjct: 168 YVNYFLCPIPEFFTTAFSFKPVSNTMLITTVLL-FSLVILIQVIFFTGFSFY 218


>AF039716-4|AAB96739.1|  616|Caenorhabditis elegans Aminopeptidase p
           protein 1 protein.
          Length = 616

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
 Frame = -2

Query: 412 KSCNYVIFA-----RWPLNSIDR*IPHNCVNCIFIFCGRRKLLVFFSNEEI 275
           K C+  +F       W LN     IP+N +   ++F   R++ VF  NE++
Sbjct: 194 KKCDAAVFTLLDDVMWLLNIRGSDIPYNPLAYSYLFVAMREIHVFIDNEKL 244


>Z83239-8|CAH60787.1|  311|Caenorhabditis elegans Hypothetical
           protein T09F5.16 protein.
          Length = 311

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +1

Query: 19  FINYFLCNKQQYLNISIDFFQIL--NVILMFLL 111
           F  YF+ N ++YLNIS++   ++  N+ + F++
Sbjct: 117 FCLYFMPNYEKYLNISVEALNVVVRNLYICFII 149


>Z78416-7|CAI79151.1|  212|Caenorhabditis elegans Hypothetical
           protein C23H4.8 protein.
          Length = 212

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +3

Query: 411 FDVVGAEFDDSLLVFDGDKLSDRVPVLSRDHLHALSRLRQH 533
           F+ V +E +D   V D + LSD        H H + R + H
Sbjct: 15  FEHVSSEIEDKRAVADENSLSDETKAHHHHHHHRIHRGKVH 55


>AL132898-11|CAB60945.4|  552|Caenorhabditis elegans Hypothetical
           protein Y59A8B.22 protein.
          Length = 552

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/58 (25%), Positives = 32/58 (55%)
 Frame = +3

Query: 240 KKLEYFTFFYLVISSFEKNTSNLRLPQKMKIQLTQL*GIYRSIELRGHLAKMT*LHDF 413
           +K+E   F+++ + +FE+NT    L +  K+ L ++  +  +I  R  + K + L +F
Sbjct: 309 RKIEKLNFYWIKLENFEQNTEISVLKKWEKLALKEIRVLLLNIFYRKIVEKCSFLDNF 366


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,772,198
Number of Sequences: 27780
Number of extensions: 172127
Number of successful extensions: 608
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)