Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1561
(617 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 346 8e-96
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 343 7e-95
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 342 2e-94
SB_56| Best HMM Match : Actin (HMM E-Value=0) 340 5e-94
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 339 1e-93
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 169 2e-42
SB_54| Best HMM Match : Actin (HMM E-Value=0) 125 3e-29
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 109 1e-24
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 84 1e-16
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 79 3e-15
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 49 3e-06
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 42 4e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.57
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.57
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.57
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.75
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.75
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 0.99
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 31 0.99
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 31 0.99
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 0.99
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 1.3
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.3
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.3
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 1.3
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.3
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 29 3.0
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 29 3.0
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 3.0
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 3.0
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 4.0
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_20354| Best HMM Match : CCT (HMM E-Value=4.2) 28 5.3
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 7.0
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 27 9.2
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 346 bits (851), Expect = 8e-96
Identities = 159/164 (96%), Positives = 164/164 (100%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 273
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 274 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 453
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 454 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 585
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTV
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTV 164
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2
Query: 587 PIYEGYALPH 616
PIYEGYALPH
Sbjct: 165 PIYEGYALPH 174
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 343 bits (843), Expect = 7e-95
Identities = 157/164 (95%), Positives = 163/164 (99%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 273
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 274 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 453
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 454 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 585
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTV
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTV 164
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 342 bits (840), Expect = 2e-94
Identities = 158/164 (96%), Positives = 163/164 (99%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 273
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 274 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 453
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 454 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 585
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTV
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTV 164
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2
Query: 587 PIYEGYALPH 616
PIYEGYALPH
Sbjct: 165 PIYEGYALPH 174
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 340 bits (836), Expect = 5e-94
Identities = 157/162 (96%), Positives = 162/162 (100%)
Frame = +1
Query: 100 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 279
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 280 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 459
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 460 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 585
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTV
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTV 163
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2
Query: 587 PIYEGYALPH 616
PIYEGYALPH
Sbjct: 164 PIYEGYALPH 173
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 339 bits (833), Expect = 1e-93
Identities = 156/162 (96%), Positives = 162/162 (100%)
Frame = +1
Query: 100 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 279
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 280 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 459
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 460 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 585
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTV
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTV 163
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2
Query: 587 PIYEGYALPH 616
PIYEGYALPH
Sbjct: 164 PIYEGYALPH 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 183 bits (445), Expect = 1e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +1
Query: 100 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 279
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 280 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 366
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 88.2 bits (209), Expect = 5e-18
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = +1
Query: 439 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 585
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTV
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTV 126
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2
Query: 587 PIYEGYALPH 616
PIYEGYALPH
Sbjct: 127 PIYEGYALPH 136
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 169 bits (411), Expect = 2e-42
Identities = 79/159 (49%), Positives = 109/159 (68%), Gaps = 3/159 (1%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 285
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 286 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 462
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 463 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 579
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTH 165
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 125 bits (302), Expect = 3e-29
Identities = 57/80 (71%), Positives = 67/80 (83%)
Frame = +1
Query: 346 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 525
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 526 ASGRTTGIVLDSGDGVSHTV 585
ASGRTTG V D GDGVSHTV
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTV 2208
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 219
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 109 bits (263), Expect = 1e-24
Identities = 46/64 (71%), Positives = 59/64 (92%)
Frame = +1
Query: 394 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 573
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 574 SHTV 585
SH+V
Sbjct: 186 SHSV 189
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 83.8 bits (198), Expect = 1e-16
Identities = 34/87 (39%), Positives = 59/87 (67%)
Frame = +1
Query: 304 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 483
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 484 PAMYVAIQAVLSLYASGRTTGIVLDSG 564
PA ++ +VL+ +A+GR+ G+V+DSG
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSG 89
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 79.0 bits (186), Expect = 3e-15
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = +1
Query: 460 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 585
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH V
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNV 42
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2
Query: 587 PIYEGYALPH 616
PIYEGYALPH
Sbjct: 43 PIYEGYALPH 52
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 219
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +1
Query: 88 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 258
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 259 GDEAQSKRGILTL 297
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1
Query: 505 QAVLSLYASGRTTGIVLDSG 564
Q LSLYASG T G+ L SG
Sbjct: 767 QLSLSLYASGMTLGVCLSSG 786
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +1
Query: 232 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 411
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 541 TGIVLDSGDGVSHTV 585
TG V+DSGDGV+H +
Sbjct: 356 TGCVIDSGDGVTHVI 370
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +1
Query: 106 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 285
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 286 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 375
L Y P + G + NWD ++IW +TF E
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Frame = +1
Query: 349 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 528
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 529 SGRTTGI----VLDSGDGVSHTVAHLRRIRTP 612
+GI V D D + T +L + P
Sbjct: 572 YSAVSGIVEQRVTDGTDEIHSTDVNLAKYNLP 603
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 216 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 100
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 295 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 447
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 436 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 552
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.57
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 339 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 163
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 162 CETGLAHT 139
CET L T
Sbjct: 252 CETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 0.75
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 339 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 163
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 162 CETGLAHT 139
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 0.75
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 339 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 163
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 162 CETGLAHT 139
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 0.75
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 339 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 163
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 162 CETGLAHT 139
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 0.99
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 339 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 163
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 162 CETGLAHT 139
CET L T
Sbjct: 447 CETQLVLT 454
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 0.99
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 339 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 163
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 162 CETGLAHT 139
CET L T
Sbjct: 288 CETQLVLT 295
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 30.7 bits (66), Expect = 0.99
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -1
Query: 581 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 429
VWE T P + T+P + D Y S +W+ VL N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 428 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 264
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 30.7 bits (66), Expect = 0.99
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 473 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 583
H+T P P T PS P C + P C+T T+SP P
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKP 701
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 0.99
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 339 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 163
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 162 CETGLAHT 139
CET L T
Sbjct: 212 CETQLVLT 219
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 366 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 199
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268
Query: 198 DRGEHGARSIISCETGLAHT 139
+HG R +SCET L T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 420 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 512
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 366 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 199
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 198 DRGEHGARSIISCETGLAHT 139
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 366 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 199
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667
Query: 198 DRGEHGARSIISCETGLAHT 139
+HG R +SCET L T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 366 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 199
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695
Query: 198 DRGEHGARSIISCETGLAHT 139
+HG R +SCET L T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.3
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 500 PSKPCSRCTRPVVPP 544
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 366 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 199
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105
Query: 198 DRGEHGARSIISCETGLAHT 139
+HG R +SCET L T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 366 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 199
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 198 DRGEHGARSIISCETGLAHT 139
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +2
Query: 464 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPW 586
C+K T PCT PC+ CT+ +P +TP T TP+
Sbjct: 761 CTKRYT--PCTERYTPCTERYTPCTKRYIPFAKRYTPCTERYTPY 803
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 485 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPWP 589
PP P P + TRP VP +T PTP P
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPP 953
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 485 PPCTSPSKPCSRCTRPVVPPVSC 553
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 273 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/75 (25%), Positives = 26/75 (34%)
Frame = +2
Query: 359 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 538
+PS M C PP S + T T+P+ P + T P
Sbjct: 86 LPSWMPCNCPPDEDDSKGGAAGAEEKEEGEGGGDTPTTAPTTA-ATTPTTPTTAPTTPTT 144
Query: 539 PPVSCWTPATVSPTP 583
P + TP T + TP
Sbjct: 145 PTTAATTPTTAATTP 159
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 472 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTV 585
++ T A+ + S RT TG V+DSGDGV+H +
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVI 76
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 339 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 163
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 162 CETGLAHT 139
CET L T
Sbjct: 263 CETQLVLT 270
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 339 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 163
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 162 CETGLAHT 139
CET L T
Sbjct: 61 CETQLVLT 68
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.7 bits (61), Expect = 4.0
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = -3
Query: 279 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 115
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 114 GNFFVAHLE 88
G V L+
Sbjct: 521 GQVDVLLLD 529
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 424 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 552
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 494 TSPSKPCSRCTRPVVPPVSCWTPATVSPTP 583
+SP KP T+PVVP P+ + P P
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKP 1540
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -1
Query: 575 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 402
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 401 G 399
G
Sbjct: 147 G 147
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 485 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 580
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_20354| Best HMM Match : CCT (HMM E-Value=4.2)
Length = 140
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 498 RHPSRALAVRVRSYHRYRAGLRRRCLPHRGPSTKDTHSPT 617
RH + L+ R R HRY A C + S K HSPT
Sbjct: 26 RHKALRLSWRFRPQHRYLA----NCTTQKNLSLKKKHSPT 61
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 485 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 583
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 482 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 580
+PP T+PSK T P+ P++ TP T T
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKAT 411
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 206 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 96
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 273 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
LC + ++LSH + H L +HG R +SCET L T
Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 262 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 116
LL +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -2
Query: 268 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 98
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,155,675
Number of Sequences: 59808
Number of extensions: 587253
Number of successful extensions: 2305
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2287
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -