Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1559
(508 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 151 3e-37
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 148 3e-36
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 89 2e-18
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 85 3e-17
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 85 3e-17
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 81 7e-16
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 75 3e-14
10_08_0620 - 19321612-19323237 71 5e-13
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 70 9e-13
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 64 5e-11
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 58 5e-09
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 48 3e-06
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 48 6e-06
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 47 1e-05
10_08_0289 + 16534063-16534100,16534219-16534243,16534847-165349... 46 2e-05
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 45 3e-05
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 42 4e-04
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695... 42 4e-04
05_06_0132 + 25893241-25893435,25894266-25894487,25894567-258948... 29 1.6
03_01_0281 + 2160480-2162003 28 5.0
02_01_0699 - 5220896-5221345,5221403-5221504,5221694-5222343,522... 27 8.7
01_05_0174 + 18919759-18920265,18920381-18920443,18921060-189217... 27 8.7
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 151 bits (366), Expect = 3e-37
Identities = 79/133 (59%), Positives = 94/133 (70%)
Frame = +1
Query: 58 RILKNEAQEEKAEVARMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGA 237
R+LK++A EEK E ARM++FIGA+AI DLVK+TLGPKGMDKIL S GR V VTNDGA
Sbjct: 3 RVLKDDAVEEKGERARMAAFIGAMAIADLVKTTLGPKGMDKILQSTGRGRS-VTVTNDGA 61
Query: 238 TILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXXXXXXXXHPQTIIA 417
TILKS+ +DNPAAK+LVD+SKVQD+EVGDGTTSV V HP TIIA
Sbjct: 62 TILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIA 121
Query: 418 WLENCF*CSQTSL 456
C++ +L
Sbjct: 122 GYRMAVECARNAL 134
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 148 bits (358), Expect = 3e-36
Identities = 76/120 (63%), Positives = 88/120 (73%)
Frame = +1
Query: 58 RILKNEAQEEKAEVARMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGA 237
R+LK++A EEK E ARM+SF+G +AI DLVK+TLGPKGMDKIL S GR V VTNDGA
Sbjct: 4 RLLKDDATEEKGERARMASFVGGMAISDLVKTTLGPKGMDKILQSTGRGRS-VTVTNDGA 62
Query: 238 TILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXXXXXXXXHPQTIIA 417
TILKS+ +DNPAAK+LVD+SKVQD+EVGDGTTSV V HP TIIA
Sbjct: 63 TILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIA 122
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 89.0 bits (211), Expect = 2e-18
Identities = 47/125 (37%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Frame = +1
Query: 40 VSLN-PIRILKNEAQEEKAEVARMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQV 216
++LN P+ +LK+ + E ++ A A+ D++++TLGP+ M K+L+ SG +
Sbjct: 1 MALNAPVLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDA---SGGI 57
Query: 217 EVTNDGATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXXXXXXXX 396
VTNDG IL+ I + +PAAK ++++S+ QDEEVGDGTTSV V
Sbjct: 58 VVTNDGNAILREIDIAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKHY 117
Query: 397 HPQTI 411
HP I
Sbjct: 118 HPTVI 122
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 85.0 bits (201), Expect = 3e-17
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
Frame = +1
Query: 46 LNPIRILKNEAQEEKAEVARMSSFIGAIAI-GDLVKSTLGPKGMDKILVSCGRNSGQVEV 222
+ P IL E + A++ S I A + D V++TLGP+GMDK++ + G +
Sbjct: 5 MQPQIILLKEGTDTSQGRAQVVSNINACTVVADTVRTTLGPRGMDKLIHD---DKGGTTI 61
Query: 223 TNDGATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXXXXXXXXHP 402
+NDGATI++ + + +PAAKILVD++K QD EVGDGTT+V + HP
Sbjct: 62 SNDGATIMRLLDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHP 121
Query: 403 QTII 414
++I
Sbjct: 122 HSLI 125
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 85.0 bits (201), Expect = 3e-17
Identities = 43/120 (35%), Positives = 68/120 (56%)
Frame = +1
Query: 52 PIRILKNEAQEEKAEVARMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTND 231
P+ +LK+ + E ++ A A+ D++++TLGP+ M K+L+ +G + VTND
Sbjct: 6 PVLVLKDSLKRESGTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDA---AGGIVVTND 62
Query: 232 GATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXXXXXXXXHPQTI 411
G IL+ + + +PAAK ++++S+ QDEEVGDGTTSV V HP I
Sbjct: 63 GNCILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVI 122
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 80.6 bits (190), Expect = 7e-16
Identities = 42/100 (42%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +1
Query: 52 PIRILKNEAQEEKAEV--ARMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVT 225
P IL+ + ++ + A+ ++ A+ +++++LGPKGMDK+L S G V +T
Sbjct: 11 PFIILREQEKKSRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQS---PDGDVTIT 67
Query: 226 NDGATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTV 345
NDGATIL+ + VDN AK++V++S QD E+GDGTT V V
Sbjct: 68 NDGATILEQMDVDNQIAKLMVELSCSQDYEIGDGTTGVVV 107
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 74.9 bits (176), Expect = 3e-14
Identities = 41/104 (39%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Frame = +1
Query: 40 VSLNPIRILKNEAQEE--KAEVARMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQ 213
V+ +P + K E + + + R + A A+ D V+++LGP+GMDK ++S G +
Sbjct: 5 VAASPAQSRKTETYTDTKRRDDVRGLNIAAARAVADAVRTSLGPRGMDK-MISSGEQ--E 61
Query: 214 VEVTNDGATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTV 345
V +TNDGATIL + + PAA++L ++S+ QD GDGTT+V V
Sbjct: 62 VIITNDGATILSRMSLLQPAARMLAELSRSQDAAAGDGTTTVVV 105
>10_08_0620 - 19321612-19323237
Length = 541
Score = 70.9 bits (166), Expect = 5e-13
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Frame = +1
Query: 40 VSLNPIRILKNEAQEE--KAEVARMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQ 213
V+ +P + K E + + + R + A+ +++LGP+GMDK++ S Q
Sbjct: 5 VAASPAQSRKTETYTDTKRRDDVRGLNIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQ 64
Query: 214 -VEVTNDGATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTV 345
V +TNDGATIL + + PAA++L D+S+ QD GDGTT+V V
Sbjct: 65 AVIITNDGATILSRMPLLQPAARMLADLSRSQDAAAGDGTTTVVV 109
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 70.1 bits (164), Expect = 9e-13
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +1
Query: 208 GQVEVTNDGATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXXXXX 387
G V +TNDGATIL+ + V++PAAK+LV+++++QD EVGDGTTSV +
Sbjct: 7 GDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGNDLVR 66
Query: 388 XXXHPQTIIA 417
HP +II+
Sbjct: 67 NKIHPTSIIS 76
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 64.5 bits (150), Expect = 5e-11
Identities = 35/120 (29%), Positives = 59/120 (49%)
Frame = +1
Query: 55 IRILKNEAQEEKAEVARMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDG 234
+R+L A+ A + A + D++K+ LGPKG K+LV +G +++T DG
Sbjct: 3 LRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVG---GAGDIKLTKDG 59
Query: 235 ATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXXXXXXXXHPQTII 414
T+LK + + NP A ++ + QD+ GDGTTS + HP+ ++
Sbjct: 60 NTLLKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLV 119
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 57.6 bits (133), Expect = 5e-09
Identities = 27/62 (43%), Positives = 44/62 (70%)
Frame = +1
Query: 142 LVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILVDMSKVQDEEVG 321
+ +++LGP GM+K++++ + ++ VTND ATI+ + V +PAAKILV + Q EE+G
Sbjct: 37 ITRTSLGPNGMNKMVIN---HLDKLFVTNDAATIVNELEVQHPAAKILVLAGRAQQEEIG 93
Query: 322 DG 327
DG
Sbjct: 94 DG 95
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 48.4 bits (110), Expect = 3e-06
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Frame = +1
Query: 100 ARMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIG----VDN 267
AR G + D VK T+GPKG ++ ++ G +VT DG T+ KSI V N
Sbjct: 81 ARALMLRGVEELADAVKVTMGPKGRTVVIE---QSFGAPKVTKDGVTVAKSIEFSNRVKN 137
Query: 268 PAAKILVDMSKVQDEEVGDGTTSVTV 345
A ++ ++ ++ GDGTT TV
Sbjct: 138 VGASLVKQVANATNDTAGDGTTCATV 163
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 47.6 bits (108), Expect = 6e-06
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Frame = +1
Query: 100 ARMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSI----GVDN 267
AR + G + D VK T+GPKG + I+ R+ +VT DG T+ KSI N
Sbjct: 128 ARAALLQGVNDLADAVKVTMGPKGRNVII---ERSHRAPKVTKDGVTVAKSIEFEDSAKN 184
Query: 268 PAAKILVDMSKVQDEEVGDGTTSVTV 345
A ++ +++ ++ GDGTT TV
Sbjct: 185 VGANLVKQVAEATNKVAGDGTTCATV 210
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +1
Query: 121 GAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNP----AAKILV 288
G + DLV TLGPKG + +L S G ++ NDG T+ K + +++P AK++
Sbjct: 71 GVNKLADLVGVTLGPKGRNVVLES---KYGSPKIVNDGVTVAKEVELEDPVENIGAKLVR 127
Query: 289 DMSKVQDEEVGDGTTSVTV 345
+ ++ GDGTT+ V
Sbjct: 128 QAAAKTNDLAGDGTTTSVV 146
>10_08_0289 +
16534063-16534100,16534219-16534243,16534847-16534978,
16535255-16535441,16536014-16536189,16536282-16536377,
16536511-16536615,16536654-16536683,16536698-16536784,
16536874-16536963,16537033-16537113,16537200-16537268,
16537413-16537490,16537578-16537673,16537981-16538080,
16538208-16538311,16538396-16538501,16538595-16538673,
16538861-16538963
Length = 593
Score = 46.0 bits (104), Expect = 2e-05
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Frame = +1
Query: 100 ARMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNS------GQVEVTNDGATILKSIG- 258
AR G + D VK T+GPK + + GRN G +VT DG T+ KSI
Sbjct: 43 ARALMLRGVEELADAVKVTMGPKIGLNVSIMQGRNVVIEQSYGSPKVTKDGVTVAKSIEF 102
Query: 259 ---VDNPAAKILVDMSKVQDEEVGDGTTSVTV 345
V N A ++ ++ ++ GDGTT TV
Sbjct: 103 KDRVKNVGASLVKQVANATNDTAGDGTTCATV 134
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 45.2 bits (102), Expect = 3e-05
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +1
Query: 121 GAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNP----AAKILV 288
G + DLV TLGPKG + +L S G + NDG T+ + + +++P AK++
Sbjct: 75 GVNKLADLVGVTLGPKGRNVVLES---KYGSPRIVNDGVTVAREVELEDPVENIGAKLVR 131
Query: 289 DMSKVQDEEVGDGTTSVTV 345
+ ++ GDGTT+ V
Sbjct: 132 QAAAKTNDLAGDGTTTSVV 150
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 41.5 bits (93), Expect = 4e-04
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = +1
Query: 67 KNEAQEEKAEVARMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATIL 246
K+ A ++K+ A + G + + V TLGP+G + +L G +V NDG TI
Sbjct: 40 KDIAFDQKSRAALQA---GVEKLANAVGVTLGPRGRNVVL----DEYGSPKVVNDGVTIA 92
Query: 247 KSIGV----DNPAAKILVDMSKVQDEEVGDGTTSVTV 345
++I + +N A ++ +++ ++ GDGTT+ +V
Sbjct: 93 RAIELYDPMENAGAALIREVASKTNDSAGDGTTTASV 129
>03_06_0760 -
36067752-36068045,36068260-36068711,36069263-36069569,
36069719-36069864,36069989-36070196,36070339-36070460,
36070621-36070789,36070875-36070931
Length = 584
Score = 41.5 bits (93), Expect = 4e-04
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Frame = +1
Query: 28 SSKMVSL-NPIR---ILKNEAQEEKAEVARMSSF-IGAIAIGDLVKSTLGPKGMDKILVS 192
SS+ SL P R +++ A+E + SS G + V TLGP+G + +L
Sbjct: 24 SSRSASLPGPARRLGVVRASAKEIAFDQGSRSSLQAGVEKLAAAVAVTLGPRGRNVVL-- 81
Query: 193 CGRNSGQVEVTNDGATILKSIGV----DNPAAKILVDMSKVQDEEVGDGTTSVTV 345
G +V NDG TI ++I + +N A ++ +++ ++ GDGTT+ +V
Sbjct: 82 --DEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASV 134
>05_06_0132 +
25893241-25893435,25894266-25894487,25894567-25894863,
25894944-25895111,25895201-25895368,25895456-25895536,
25895704-25895770,25895874-25895971,25896587-25896659,
25896753-25896823,25896919-25896968,25897698-25897810,
25898182-25898300,25898629-25898721,25899025-25899051,
25899422-25899823,25900467-25900513,25900612-25900651,
25900733-25900795,25900881-25901018,25901873-25902031,
25902111-25902164,25902324-25902392,25902514-25902643,
25902909-25902949,25903133-25903178,25903200-25903357,
25903560-25903605,25903702-25903853,25904022-25904243
Length = 1202
Score = 29.5 bits (63), Expect = 1.6
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = -3
Query: 266 LSTPIDFNIVAPSFVTST*PEFL-PQETKILSIPLGPKVLFTKSPMAIAPMKLDIRATSA 90
L P+ I++P P+F+ P +TKI ++P G K+ SP+ + L I S
Sbjct: 100 LDVPLPGVIISPPL-----PDFVEPSKTKITTLPNGIKIASETSPIPAVSVGLYIDCGSV 154
Query: 89 F----SSCASFLRIRIGFNDT 39
+ SS S L R+ F T
Sbjct: 155 YETSSSSGTSHLLERMAFKST 175
>03_01_0281 + 2160480-2162003
Length = 507
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 199 SRRKLRSYPFLWDLKYSLPNLLWQ*HR-*NWTSEQLQLSPLVLHF*G 62
S+RK + P W L LP+LL HR +W + L S L F G
Sbjct: 26 SKRKNTAIPVCWPLIGMLPDLLANRHRIHDWITSLLTASQLNFRFTG 72
>02_01_0699 -
5220896-5221345,5221403-5221504,5221694-5222343,
5222445-5222793,5223189-5223510,5223621-5224123,
5224486-5224578,5224708-5224759,5224837-5225129,
5225208-5225630,5225734-5226070,5226185-5226220,
5226272-5226589,5227465-5228450
Length = 1637
Score = 27.1 bits (57), Expect = 8.7
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 EKAEVARMSSFIGAIAIGDLVKSTLG-PKGMDKILVSCGRNSGQVEVTNDGATILKSIG 258
E+ A M F G I G L+K+ LG P G L + ++E ATI+KS+G
Sbjct: 434 ERLLAAGMHLFSGLIVNG-LLKTALGVPPGSATTLTPAQDQTFRIESVKCLATIIKSMG 491
>01_05_0174 +
18919759-18920265,18920381-18920443,18921060-18921761,
18922934-18923068,18923391-18923474,18924095-18924151,
18924290-18924376,18924963-18925205
Length = 625
Score = 27.1 bits (57), Expect = 8.7
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = +1
Query: 67 KNEAQEEKAEVARMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATIL 246
+ E +E KAE AR A+ IG+ VK T K K S E+ D +
Sbjct: 118 EEEEEEAKAEEAREEENTEAVPIGEPVKITGRGKKQRKHYTSFEYEGNTFEL-EDPVLLT 176
Query: 247 KSIGVDNPAAKILVDMSKVQ 306
+ P IL D+++ +
Sbjct: 177 PEDSKEKPYVAILKDITETE 196
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,834,694
Number of Sequences: 37544
Number of extensions: 206581
Number of successful extensions: 474
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -