Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1549
(467 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A2A246 Cluster: Y-box protein; n=2; Bombyx mori|Rep: Y-... 121 7e-27
UniRef50_Q5MGM1 Cluster: Putative uncharacterized protein; n=4; ... 118 5e-26
UniRef50_P41824 Cluster: Y-box factor homolog; n=2; cellular org... 101 6e-21
UniRef50_Q8IT93 Cluster: Y-box protein Ct-p50; n=4; Endopterygot... 100 1e-20
UniRef50_UPI00005843EB Cluster: PREDICTED: similar to Y-Box fact... 99 2e-20
UniRef50_A0NEN6 Cluster: ENSANGP00000031633; n=12; cellular orga... 99 6e-20
UniRef50_P67809 Cluster: Nuclease sensitive element-binding prot... 98 7e-20
UniRef50_P16989 Cluster: DNA-binding protein A; n=92; cellular o... 97 1e-19
UniRef50_O46173 Cluster: Y-box protein; n=5; cellular organisms|... 97 2e-19
UniRef50_O13015 Cluster: Y box protein 2; n=1; Carassius auratus... 96 3e-19
UniRef50_Q9Y2T7 Cluster: Y-box-binding protein 2; n=21; Tetrapod... 96 3e-19
UniRef50_Q90650 Cluster: Rous sarcoma virus transcription enhanc... 95 7e-19
UniRef50_Q90WH1 Cluster: Cold-shock domain protein; n=1; Oryzias... 93 4e-18
UniRef50_O62213 Cluster: Putative uncharacterized protein cey-1;... 91 1e-17
UniRef50_Q4H2L8 Cluster: Y-box protein 1/2/3; n=2; Ciona intesti... 90 3e-17
UniRef50_UPI0000DC0B82 Cluster: UPI0000DC0B82 related cluster; n... 78 1e-13
UniRef50_Q9XSU1 Cluster: DNA binding protein; n=3; Amniota|Rep: ... 76 3e-13
UniRef50_UPI00015B4254 Cluster: PREDICTED: similar to Y-box prot... 76 4e-13
UniRef50_UPI0000DC0B3F Cluster: UPI0000DC0B3F related cluster; n... 74 2e-12
UniRef50_Q52KT6 Cluster: MGC115344 protein; n=2; Xenopus|Rep: MG... 73 2e-12
UniRef50_Q23960 Cluster: Y-box protein; n=2; Dugesia|Rep: Y-box ... 72 7e-12
UniRef50_Q17JD9 Cluster: Putative uncharacterized protein; n=1; ... 66 3e-10
UniRef50_A4V6J7 Cluster: Y-Box factor protein; n=1; Dugesia japo... 62 6e-09
UniRef50_Q75QN8 Cluster: Cold shock domain protein 3; n=2; Triti... 56 4e-07
UniRef50_P91306 Cluster: Y-box protein 2; n=2; Caenorhabditis el... 56 5e-07
UniRef50_UPI00006A28C0 Cluster: Y-box-binding protein 2 (Germ ce... 54 2e-06
UniRef50_A7RV03 Cluster: Predicted protein; n=1; Nematostella ve... 52 8e-06
UniRef50_Q2RQP4 Cluster: Cold-shock DNA-binding domain protein; ... 51 1e-05
UniRef50_P0A981 Cluster: Cold shock-like protein cspG; n=154; Ba... 51 1e-05
UniRef50_UPI00015BD510 Cluster: UPI00015BD510 related cluster; n... 50 3e-05
UniRef50_UPI0000DC181B Cluster: UPI0000DC181B related cluster; n... 50 3e-05
UniRef50_Q4JMV8 Cluster: Predicted cold shock family protein; n=... 50 3e-05
UniRef50_A3BPB0 Cluster: Putative uncharacterized protein; n=2; ... 50 3e-05
UniRef50_Q7D268 Cluster: AGR_C_161p; n=7; Proteobacteria|Rep: AG... 50 3e-05
UniRef50_A1L2L1 Cluster: LOC100036881 protein; n=1; Xenopus laev... 49 4e-05
UniRef50_Q9Z3S6 Cluster: Cold shock protein cspA; n=59; Alphapro... 49 4e-05
UniRef50_Q2S0T4 Cluster: Conserved domain protein; n=2; Bacteroi... 49 6e-05
UniRef50_P39818 Cluster: Cold shock-like protein cspJ; n=7; Bact... 49 6e-05
UniRef50_Q9XTJ6 Cluster: Putative uncharacterized protein cey-4;... 48 8e-05
UniRef50_A4VMZ2 Cluster: Cold shock protein CspA; n=12; Bacteria... 48 1e-04
UniRef50_P0A975 Cluster: Cold shock-like protein cspE; n=28; Bac... 48 1e-04
UniRef50_Q6N3M1 Cluster: Cold shock DNA binding protein; n=78; B... 48 1e-04
UniRef50_Q1GQL9 Cluster: Cold-shock DNA-binding domain protein; ... 48 1e-04
UniRef50_O65639 Cluster: Glycine-rich protein; n=8; Magnoliophyt... 48 1e-04
UniRef50_A5BWB0 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_A4RZ32 Cluster: Predicted protein; n=1; Ostreococcus lu... 48 1e-04
UniRef50_Q3Y013 Cluster: Cold-shock protein, DNA-binding; n=6; c... 47 2e-04
UniRef50_P0A9Y2 Cluster: Cold shock protein cspA; n=39; Gammapro... 47 2e-04
UniRef50_A3YF52 Cluster: Cold-shock protein, DNA-binding; n=2; M... 46 3e-04
UniRef50_Q83RI9 Cluster: Cold shock-like protein cspC; n=38; Gam... 46 3e-04
UniRef50_A5NZH6 Cluster: Putative cold-shock DNA-binding domain ... 46 4e-04
UniRef50_Q38896 Cluster: Glycine-rich protein 2b; n=26; cellular... 46 4e-04
UniRef50_Q1N1Z0 Cluster: Cold shock protein; n=14; Bacteria|Rep:... 46 5e-04
UniRef50_Q08VT0 Cluster: Conserved domain protein; n=2; Bacteria... 46 5e-04
UniRef50_A7DA86 Cluster: Putative cold-shock DNA-binding domain ... 46 5e-04
UniRef50_A0YCJ0 Cluster: Cold-shock DNA-binding protein; n=1; ma... 46 5e-04
UniRef50_Q1RLA8 Cluster: Zinc finger protein; n=1; Ciona intesti... 46 5e-04
UniRef50_A1CFX7 Cluster: Cold shock NA binding domain protein; n... 46 5e-04
UniRef50_P54584 Cluster: Cold shock protein; n=6; Bacteria|Rep: ... 46 5e-04
UniRef50_P0A363 Cluster: Cold shock-like protein cspB; n=367; ro... 46 5e-04
UniRef50_UPI000155640A Cluster: PREDICTED: hypothetical protein;... 45 7e-04
UniRef50_Q9ZFK9 Cluster: CspA; n=25; Bacteria|Rep: CspA - Myxoco... 45 7e-04
UniRef50_Q1ZKE8 Cluster: Cold shock protein; n=3; Gammaproteobac... 45 7e-04
UniRef50_Q9AN51 Cluster: ID534; n=52; Bacteria|Rep: ID534 - Brad... 45 0.001
UniRef50_Q8D046 Cluster: Cold shock protein; n=14; Enterobacteri... 45 0.001
UniRef50_Q0BPU3 Cluster: Cold shock protein; n=1; Granulibacter ... 45 0.001
UniRef50_Q016S2 Cluster: Putative nucleic acid binding protein; ... 44 0.001
UniRef50_Q8KES2 Cluster: Cold shock-like protein CspG; n=9; Chlo... 44 0.002
UniRef50_Q2J4H7 Cluster: Cold-shock DNA-binding domain protein; ... 44 0.002
UniRef50_Q8GI47 Cluster: Cold shock protein homolog; n=5; Deinoc... 44 0.002
UniRef50_Q2BKV8 Cluster: Cold-shock domain family protein; n=3; ... 44 0.002
UniRef50_A4BC11 Cluster: Cold shock protein; n=1; Reinekea sp. M... 44 0.002
UniRef50_Q2LZN5 Cluster: GA14466-PA; n=3; Endopterygota|Rep: GA1... 44 0.002
UniRef50_Q9VRN5 Cluster: Lin-28 homolog; n=1; Drosophila melanog... 44 0.002
UniRef50_P39158 Cluster: Cold shock protein cspC; n=41; Bacteria... 44 0.002
UniRef50_P72366 Cluster: Cold shock-like protein cspA; n=29; Bac... 44 0.002
UniRef50_Q8YIC6 Cluster: COLD SHOCK PROTEIN CSPA; n=4; Brucella|... 44 0.002
UniRef50_Q87NH9 Cluster: Cold shock transcriptional regulator Cs... 44 0.002
UniRef50_A3YG84 Cluster: Cold-shock protein CspD; n=1; Marinomon... 44 0.002
UniRef50_P92186 Cluster: Protein lin-28; n=5; Caenorhabditis|Rep... 44 0.002
UniRef50_P62169 Cluster: Cold shock-like protein cspC; n=26; cel... 44 0.002
UniRef50_P72188 Cluster: Cold shock protein capA; n=23; Proteoba... 44 0.002
UniRef50_Q5NP11 Cluster: Cold shock protein; n=1; Zymomonas mobi... 43 0.003
UniRef50_Q2JGE4 Cluster: Cold-shock DNA-binding domain protein; ... 43 0.003
UniRef50_Q9ZFK8 Cluster: CspB; n=4; cellular organisms|Rep: CspB... 43 0.003
UniRef50_Q11D48 Cluster: Cold-shock DNA-binding domain protein; ... 43 0.003
UniRef50_A6E2L2 Cluster: Cold-shock DNA-binding domain protein; ... 43 0.003
UniRef50_A5ZXC4 Cluster: Putative uncharacterized protein; n=2; ... 43 0.003
UniRef50_Q4UBG6 Cluster: Cold shock protein, putative; n=2; Thei... 43 0.003
UniRef50_Q0YRJ0 Cluster: Cold-shock protein, DNA-binding; n=1; C... 43 0.004
UniRef50_Q0SKK0 Cluster: Cold shock protein; n=20; Bacteria|Rep:... 43 0.004
UniRef50_Q5CVY2 Cluster: Cold shock RNA binding domain of the OB... 43 0.004
UniRef50_Q89E28 Cluster: Cold shock protein; n=8; cellular organ... 42 0.005
UniRef50_Q28L70 Cluster: Cold-shock DNA-binding domain protein; ... 42 0.005
UniRef50_Q1QAP9 Cluster: Cold-shock DNA-binding domain protein; ... 42 0.005
UniRef50_Q5JKD6 Cluster: Cold shock domain protein 2-like protei... 42 0.005
UniRef50_Q9S1B7 Cluster: Cold shock-like protein cspA; n=10; Bac... 42 0.005
UniRef50_Q9I0L6 Cluster: Cold-shock protein CspD; n=12; Gammapro... 42 0.007
UniRef50_Q5GRS9 Cluster: Cold shock protein; n=3; Wolbachia|Rep:... 42 0.007
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 42 0.007
UniRef50_A4U251 Cluster: Cold shock DNA-binding domain protein; ... 42 0.007
UniRef50_Q2S3Y3 Cluster: 'Cold-shock' DNA-binding domain, putati... 42 0.009
UniRef50_Q9ZCP9 Cluster: Cold shock-like protein cspA; n=12; Bac... 42 0.009
UniRef50_Q982F0 Cluster: Cold-shock protein; n=3; Mesorhizobium ... 41 0.012
UniRef50_Q1FKR2 Cluster: Cold-shock protein, DNA-binding; n=2; C... 41 0.012
UniRef50_Q8I248 Cluster: Cold-shock protein, putative; n=3; Plas... 41 0.012
UniRef50_Q82ZV8 Cluster: Cold-shock domain family protein; n=7; ... 41 0.016
UniRef50_Q74BX3 Cluster: Cold shock domain family protein; n=13;... 41 0.016
UniRef50_Q1GT29 Cluster: Cold-shock DNA-binding domain protein; ... 41 0.016
UniRef50_A3Y9L0 Cluster: Cold-shock DNA-binding domain protein; ... 41 0.016
UniRef50_Q9PA96 Cluster: Temperature acclimation protein B; n=24... 40 0.021
UniRef50_Q8G880 Cluster: Cold shock protein; n=3; Bifidobacteriu... 40 0.021
UniRef50_Q5FNZ7 Cluster: Cold shock protein; n=1; Gluconobacter ... 40 0.021
UniRef50_Q013V8 Cluster: Glycogen debranching enzyme; n=1; Ostre... 40 0.021
UniRef50_Q1RHK6 Cluster: Cold shock-like protein cspA; n=2; Rick... 40 0.021
UniRef50_Q9KXN2 Cluster: Cold shock protein B; n=7; Bacteria|Rep... 40 0.027
UniRef50_Q6FAY9 Cluster: Cold shock-like protein; n=44; Bacteria... 40 0.027
UniRef50_Q60AQ4 Cluster: Cold shock protein; n=27; Bacteria|Rep:... 40 0.027
UniRef50_Q4F6X8 Cluster: Cold shock protein; n=6; Gammaproteobac... 40 0.027
UniRef50_A5V9E9 Cluster: Putative cold-shock DNA-binding domain ... 40 0.027
UniRef50_A3VSH0 Cluster: Cold shock protein; n=1; Parvularcula b... 40 0.027
UniRef50_A3UBK6 Cluster: Cold-shock DNA-binding domain protein; ... 40 0.027
UniRef50_Q835L0 Cluster: Cold-shock domain family protein; n=24;... 40 0.036
UniRef50_Q834D5 Cluster: Cold-shock domain family protein; n=1; ... 40 0.036
UniRef50_Q0C0S6 Cluster: Cold shock DNA-binding protein; n=1; Hy... 40 0.036
UniRef50_A5ZS66 Cluster: Putative uncharacterized protein; n=1; ... 40 0.036
UniRef50_A4A3Y7 Cluster: Cold-shock domain family protein; n=1; ... 40 0.036
UniRef50_A3J3Q2 Cluster: Cold shock protein; n=7; Flavobacterial... 40 0.036
UniRef50_A2TNS0 Cluster: Cold shock protein; n=4; Bacteroidetes|... 40 0.036
UniRef50_P0A971 Cluster: Cold shock-like protein cspD; n=12; Gam... 40 0.036
UniRef50_Q6N6T9 Cluster: Cold shock DNA binding protein; n=38; A... 39 0.047
UniRef50_Q2RNN9 Cluster: Cold-shock DNA-binding domain protein; ... 39 0.047
UniRef50_A7HXE8 Cluster: Putative cold-shock DNA-binding domain ... 39 0.047
UniRef50_P0A353 Cluster: Cold shock-like protein cspA; n=288; Ba... 39 0.047
UniRef50_Q7NNC3 Cluster: Gsr0488 protein; n=1; Gloeobacter viola... 39 0.063
UniRef50_Q3VJZ1 Cluster: Cold-shock protein, DNA-binding precurs... 39 0.063
UniRef50_A4EHC3 Cluster: Cold shock protein; n=1; Roseobacter sp... 39 0.063
UniRef50_Q1QLF4 Cluster: Cold-shock DNA-binding domain protein; ... 38 0.083
UniRef50_A1ZFN2 Cluster: Conserved domain protein; n=2; Flexibac... 38 0.083
UniRef50_A4LXQ2 Cluster: Cold-shock DNA-binding domain protein; ... 38 0.11
UniRef50_UPI000150A0B6 Cluster: hypothetical protein TTHERM_0034... 38 0.14
UniRef50_UPI0000DD7E8C Cluster: PREDICTED: hypothetical protein;... 38 0.14
UniRef50_UPI0000589074 Cluster: PREDICTED: similar to ENSANGP000... 38 0.14
UniRef50_Q6YPQ4 Cluster: Cold shock protein; n=3; Firmicutes|Rep... 38 0.14
UniRef50_Q5ZWM5 Cluster: Cold shock domain family protein; n=6; ... 38 0.14
UniRef50_A2U2L8 Cluster: Cold shock protein; n=3; Bacteroidetes|... 38 0.14
UniRef50_Q0APJ7 Cluster: Cold-shock DNA-binding domain protein; ... 37 0.19
UniRef50_A0YBV1 Cluster: CspA-like protein; n=17; Proteobacteria... 37 0.19
UniRef50_P46449 Cluster: Cold shock-like protein cspD; n=31; Bac... 37 0.19
UniRef50_Q4S6T5 Cluster: Chromosome 14 SCAF14723, whole genome s... 37 0.25
UniRef50_Q0M3I1 Cluster: Cold-shock protein, DNA-binding; n=1; C... 37 0.25
UniRef50_Q28PH1 Cluster: Cold-shock DNA-binding domain protein; ... 36 0.33
UniRef50_Q1AWL7 Cluster: Cold-shock DNA-binding domain protein; ... 36 0.33
UniRef50_Q0I3L0 Cluster: Cold shock-like protein; n=2; Proteobac... 36 0.33
UniRef50_Q7VLQ6 Cluster: Cold shock-like protein CspD; n=6; Prot... 36 0.44
UniRef50_Q2RWM8 Cluster: Cold-shock DNA-binding domain protein; ... 36 0.44
UniRef50_Q9ZAH1 Cluster: Cold shock protein C; n=10; Streptococc... 36 0.44
UniRef50_Q6SK65 Cluster: Peptide synthetase; n=5; cellular organ... 36 0.44
UniRef50_Q1VQ89 Cluster: Cold shock protein; n=8; Bacteroidetes|... 36 0.44
UniRef50_Q9HSS3 Cluster: Cold shock protein; n=7; Halobacteriace... 36 0.44
UniRef50_UPI00006CB81E Cluster: conserved hypothetical protein; ... 36 0.58
UniRef50_Q9KI38 Cluster: Ysb; n=2; Agrobacterium tumefaciens|Rep... 36 0.58
UniRef50_Q1B3F5 Cluster: Cold-shock DNA-binding domain protein; ... 36 0.58
UniRef50_Q6ZN17 Cluster: Lin-28 homolog B; n=40; Coelomata|Rep: ... 36 0.58
UniRef50_Q4FUZ6 Cluster: Possible guanine-specific ribonuclease ... 35 0.77
UniRef50_Q1GHI4 Cluster: Cold-shock DNA-binding domain protein; ... 35 0.77
UniRef50_A0BFX7 Cluster: Chromosome undetermined scaffold_105, w... 35 0.77
UniRef50_Q4P6X3 Cluster: Putative uncharacterized protein; n=1; ... 35 0.77
UniRef50_Q6F7A1 Cluster: Putative cold shock protein; n=2; Acine... 35 1.0
UniRef50_Q6ALH9 Cluster: Hypothetical cold-shock protein; n=1; D... 35 1.0
UniRef50_Q5YVF2 Cluster: Putative cold shock protein; n=1; Nocar... 35 1.0
UniRef50_O33052 Cluster: Small cold-shock protein; n=7; Coryneba... 35 1.0
UniRef50_Q4AG52 Cluster: Cold-shock protein, DNA-binding; n=3; B... 35 1.0
UniRef50_A0Z255 Cluster: Cold shock protein, CspA family-like pr... 35 1.0
UniRef50_Q48H64 Cluster: Cold shock domain protein CspD; n=7; Pr... 34 1.3
UniRef50_Q1AY27 Cluster: Cold-shock DNA-binding domain protein; ... 34 1.3
UniRef50_A2UVR3 Cluster: Cold-shock DNA-binding domain protein; ... 34 1.3
UniRef50_A0VF81 Cluster: Putative uncharacterized protein; n=4; ... 34 1.3
UniRef50_A7PXK7 Cluster: Chromosome chr12 scaffold_36, whole gen... 34 1.3
UniRef50_P81622 Cluster: Cold shock protein CspSt; n=6; Streptoc... 34 1.3
UniRef50_UPI0000EBC7F6 Cluster: PREDICTED: similar to ALR-like p... 34 1.8
UniRef50_A3X5Q6 Cluster: Putative uncharacterized protein; n=1; ... 34 1.8
UniRef50_Q2N059 Cluster: Elicitin-like protein SOL1E; n=1; Phyto... 34 1.8
UniRef50_A4QQ53 Cluster: Putative uncharacterized protein; n=1; ... 34 1.8
UniRef50_P0A985 Cluster: Cold shock-like protein cspH; n=24; Ent... 34 1.8
UniRef50_UPI0000DA1DF3 Cluster: PREDICTED: hypothetical protein;... 33 2.4
UniRef50_Q9ZBH4 Cluster: Putative DNA-binding protein; n=2; Acti... 33 2.4
UniRef50_Q475L4 Cluster: Cold-shock protein, DNA-binding; n=1; R... 33 2.4
UniRef50_Q2RZT3 Cluster: Conserved domain protein; n=2; Saliniba... 33 2.4
UniRef50_Q9RBP7 Cluster: Cold shock protein 7.4; n=2; Rhodococcu... 33 2.4
UniRef50_Q1YTJ3 Cluster: Cold shock protein; n=1; gamma proteoba... 33 2.4
UniRef50_A5EWK7 Cluster: Cold-shock DNA-binding domain protein; ... 33 2.4
UniRef50_A3WZM6 Cluster: Cold shock DNA binding protein; n=1; Ni... 33 2.4
UniRef50_A3PV18 Cluster: Peptidase S1 and S6, chymotrypsin/Hap p... 33 2.4
UniRef50_Q84NP0 Cluster: Putative uncharacterized protein P0640E... 33 2.4
UniRef50_A2XZG9 Cluster: Putative uncharacterized protein; n=2; ... 33 2.4
UniRef50_UPI0000EBE251 Cluster: PREDICTED: hypothetical protein;... 33 3.1
UniRef50_UPI0000E47651 Cluster: PREDICTED: similar to rabconnect... 33 3.1
UniRef50_Q5YVM9 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_Q2RYB6 Cluster: Helicase-like; n=6; cellular organisms|... 33 3.1
UniRef50_A3S070 Cluster: Cold shock protein; n=1; Ralstonia sola... 33 3.1
UniRef50_A0X3F5 Cluster: Cold-shock DNA-binding domain protein; ... 33 3.1
UniRef50_A0CIJ2 Cluster: Chromosome undetermined scaffold_19, wh... 33 3.1
UniRef50_Q9T076 Cluster: Early nodulin-like protein 2 precursor;... 33 3.1
UniRef50_UPI0000E81A97 Cluster: PREDICTED: hypothetical protein,... 33 4.1
UniRef50_UPI00006CB6F6 Cluster: ''''Cold-shock'''' DNA-binding d... 33 4.1
UniRef50_Q69107 Cluster: LAT protein; n=1; Human herpesvirus 2|R... 33 4.1
UniRef50_Q8BUR5 Cluster: ES cells cDNA, RIKEN full-length enrich... 33 4.1
UniRef50_Q2J4W6 Cluster: ATP-binding region, ATPase-like precurs... 33 4.1
UniRef50_O69918 Cluster: Putative uncharacterized protein SCO638... 33 4.1
UniRef50_Q03YA9 Cluster: Cold shock protein; n=1; Leuconostoc me... 33 4.1
UniRef50_A7H6L3 Cluster: Tetratricopeptide TPR_2 repeat protein;... 33 4.1
UniRef50_Q9LLC5 Cluster: Ty3 retrotransposon structural protein;... 33 4.1
UniRef50_A5KAC4 Cluster: Putative uncharacterized protein; n=1; ... 33 4.1
UniRef50_Q4P9E2 Cluster: Putative uncharacterized protein; n=1; ... 33 4.1
UniRef50_A4QZK3 Cluster: Predicted protein; n=1; Magnaporthe gri... 33 4.1
UniRef50_UPI0000DA19CE Cluster: PREDICTED: similar to nuclease s... 32 5.4
UniRef50_UPI0000D57810 Cluster: PREDICTED: similar to CG9705-PA,... 32 5.4
UniRef50_Q63708 Cluster: Transcription factor EF1; n=1; Rattus s... 32 5.4
UniRef50_Q5P4M3 Cluster: Probable cold shock family protein; n=1... 32 5.4
UniRef50_Q127M7 Cluster: Cold-shock DNA-binding domain protein; ... 32 5.4
UniRef50_A4X7H2 Cluster: Anthranilate synthase component I and c... 32 5.4
UniRef50_A3BLQ9 Cluster: Putative uncharacterized protein; n=1; ... 32 5.4
UniRef50_Q9VVA0 Cluster: CG9705-PA, isoform A; n=4; Diptera|Rep:... 32 5.4
UniRef50_A7E8L8 Cluster: Putative uncharacterized protein; n=1; ... 32 5.4
UniRef50_A6RVG9 Cluster: Putative uncharacterized protein; n=1; ... 32 5.4
UniRef50_Q7RUX3 Cluster: Pre-mRNA-splicing factor slt-11; n=13; ... 32 5.4
UniRef50_UPI000050F90E Cluster: COG1278: Cold shock proteins; n=... 32 7.2
UniRef50_Q5PBP1 Cluster: Cold shock protein; n=7; Anaplasmatacea... 32 7.2
UniRef50_Q48AJ7 Cluster: Cold-shock DNA-binding domain family pr... 32 7.2
UniRef50_Q84IJ3 Cluster: Cold shock protein; n=1; Janthinobacter... 32 7.2
UniRef50_Q41I30 Cluster: ThiJ/PfpI; n=3; Bacillaceae|Rep: ThiJ/P... 32 7.2
UniRef50_A7BYF1 Cluster: Putative uncharacterized protein; n=1; ... 32 7.2
UniRef50_A1SNP5 Cluster: Cold-shock protein, DNA-binding; n=26; ... 32 7.2
UniRef50_Q40315 Cluster: Putative surface protein; n=1; Medicago... 32 7.2
UniRef50_Q019N2 Cluster: Chromosome 05 contig 1, DNA sequence; n... 32 7.2
UniRef50_A0DVR0 Cluster: Chromosome undetermined scaffold_66, wh... 32 7.2
UniRef50_Q5KMV8 Cluster: Putative uncharacterized protein; n=1; ... 32 7.2
UniRef50_A4RHX1 Cluster: Putative uncharacterized protein; n=1; ... 32 7.2
UniRef50_A4QQA6 Cluster: Putative uncharacterized protein; n=1; ... 32 7.2
UniRef50_UPI0000F31DEE Cluster: UPI0000F31DEE related cluster; n... 31 9.5
UniRef50_Q4RP97 Cluster: Chromosome 1 SCAF15008, whole genome sh... 31 9.5
UniRef50_A4FKV9 Cluster: Putative DNA-binding protein; n=1; Sacc... 31 9.5
UniRef50_A0UNB6 Cluster: Cold-shock DNA-binding domain protein; ... 31 9.5
UniRef50_A0H485 Cluster: FAD linked oxidase-like; n=2; Chlorofle... 31 9.5
UniRef50_Q6Z0J6 Cluster: Putative permatin; n=1; Oryza sativa (j... 31 9.5
UniRef50_Q9VK95 Cluster: CG6504-PA; n=3; Drosophila melanogaster... 31 9.5
UniRef50_Q8IQ18 Cluster: CG33196-PB; n=10; Endopterygota|Rep: CG... 31 9.5
UniRef50_Q61VC3 Cluster: Putative uncharacterized protein CBG048... 31 9.5
UniRef50_Q248G5 Cluster: Putative uncharacterized protein; n=1; ... 31 9.5
UniRef50_A5KAD9 Cluster: Putative uncharacterized protein; n=1; ... 31 9.5
UniRef50_Q8WV75 Cluster: Putative uncharacterized protein; n=3; ... 31 9.5
UniRef50_Q6ZQW4 Cluster: CDNA FLJ46848 fis, clone UTERU3005422; ... 31 9.5
UniRef50_Q5K9T7 Cluster: Putative uncharacterized protein; n=2; ... 31 9.5
UniRef50_Q2U6I0 Cluster: Predicted protein; n=1; Aspergillus ory... 31 9.5
>UniRef50_A2A246 Cluster: Y-box protein; n=2; Bombyx mori|Rep: Y-box
protein - Bombyx mori (Silk moth)
Length = 272
Score = 121 bits (292), Expect = 7e-27
Identities = 63/101 (62%), Positives = 64/101 (63%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGDMIRRWSLP 344
VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI RNNPRKAVRSVGD
Sbjct: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDG-EAVEFA 91
Query: 345 WLPGRKAXXXXXXXXXXXXXXXAHLMLQTSARGYHRQYFPR 467
+ G K RGYHRQYFPR
Sbjct: 92 VVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPR 132
>UniRef50_Q5MGM1 Cluster: Putative uncharacterized protein; n=4;
cellular organisms|Rep: Putative uncharacterized protein
- Lonomia obliqua (Moth)
Length = 254
Score = 118 bits (285), Expect = 5e-26
Identities = 61/102 (59%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD-MIRRWSL 341
VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI+RNNPRKAVRSVGD + +++
Sbjct: 24 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEVVEFAV 83
Query: 342 PWLPGRKAXXXXXXXXXXXXXXXAHLMLQTSARGYHRQYFPR 467
+ G K RGY+RQY+PR
Sbjct: 84 --VAGEKGCEAAGVTGPGGEPVKGSPYAADKRRGYYRQYYPR 123
>UniRef50_P41824 Cluster: Y-box factor homolog; n=2; cellular
organisms|Rep: Y-box factor homolog - Aplysia
californica (California sea hare)
Length = 253
Score = 101 bits (243), Expect = 6e-21
Identities = 45/52 (86%), Positives = 50/52 (96%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
+IA +VSGTVKWFNVKSGYGFINR+DTKEDVFVHQTAIV+NNPRK +RSVGD
Sbjct: 28 IIASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGD 79
Score = 51.6 bits (118), Expect = 8e-06
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = +2
Query: 332 VEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
VEF VV GEKG EAA VTGP G V+GS YAAD+R
Sbjct: 83 VEFDVVEGEKGNEAANVTGPEGSNVQGSKYAADRR 117
>UniRef50_Q8IT93 Cluster: Y-box protein Ct-p50; n=4;
Endopterygota|Rep: Y-box protein Ct-p50 - Chironomus
tentans (Midge)
Length = 317
Score = 100 bits (240), Expect = 1e-20
Identities = 42/52 (80%), Positives = 50/52 (96%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
+IA KV+GTVKWFNVKSGYGFINRND K+D+FVHQ+AI++NNP+KAVRSVGD
Sbjct: 25 IIATKVTGTVKWFNVKSGYGFINRNDNKQDIFVHQSAIIKNNPKKAVRSVGD 76
Score = 66.1 bits (154), Expect = 4e-10
Identities = 31/37 (83%), Positives = 32/37 (86%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VVAGEKG EAA VTGP GEPVKGSPYAADKR
Sbjct: 78 EVVEFDVVAGEKGSEAANVTGPEGEPVKGSPYAADKR 114
>UniRef50_UPI00005843EB Cluster: PREDICTED: similar to Y-Box factor;
n=4; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to Y-Box factor - Strongylocentrotus purpuratus
Length = 326
Score = 99 bits (238), Expect = 2e-20
Identities = 45/52 (86%), Positives = 49/52 (94%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A KVSGTVKWFNVK+GYGFINR+DTKEDVFVHQ+AIVRNNPRK RSVGD
Sbjct: 19 VLATKVSGTVKWFNVKNGYGFINRDDTKEDVFVHQSAIVRNNPRKYQRSVGD 70
Score = 52.4 bits (120), Expect = 5e-06
Identities = 27/43 (62%), Positives = 29/43 (67%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRPWLPPP 454
+ VEF VV G KG EAA VTGP G PV GS YAADKR + P
Sbjct: 72 EVVEFDVVEGTKGNEAARVTGPEGAPVVGSKYAADKRRYRGRP 114
>UniRef50_A0NEN6 Cluster: ENSANGP00000031633; n=12; cellular
organisms|Rep: ENSANGP00000031633 - Anopheles gambiae
str. PEST
Length = 166
Score = 98.7 bits (235), Expect = 6e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV+G VKWFNVKSGYGFINR DT+EDVFVHQ+AI RNNP+KAVRSVGD
Sbjct: 5 VIATKVTGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGD 56
Score = 58.4 bits (135), Expect = 7e-08
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +2
Query: 332 VEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
VEF VV GEKG EAA VTGP GEPVKGS YAA+KR
Sbjct: 60 VEFDVVIGEKGNEAANVTGPQGEPVKGSQYAAEKR 94
>UniRef50_P67809 Cluster: Nuclease sensitive element-binding protein
1; n=65; Coelomata|Rep: Nuclease sensitive
element-binding protein 1 - Homo sapiens (Human)
Length = 324
Score = 98.3 bits (234), Expect = 7e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 105
Score = 56.4 bits (130), Expect = 3e-07
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 107 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>UniRef50_P16989 Cluster: DNA-binding protein A; n=92; cellular
organisms|Rep: DNA-binding protein A - Homo sapiens
(Human)
Length = 372
Score = 97.5 bits (232), Expect = 1e-19
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 137
Score = 55.2 bits (127), Expect = 7e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 139 ETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
>UniRef50_O46173 Cluster: Y-box protein; n=5; cellular
organisms|Rep: Y-box protein - Drosophila melanogaster
(Fruit fly)
Length = 359
Score = 97.1 bits (231), Expect = 2e-19
Identities = 45/52 (86%), Positives = 49/52 (94%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV+GTVKWFNVKSGYGFINRNDT+EDVFVHQ+AI NNP+KAVRSVGD
Sbjct: 58 VIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIA-NNPKKAVRSVGD 108
Score = 59.7 bits (138), Expect = 3e-08
Identities = 29/44 (65%), Positives = 33/44 (75%), Gaps = 4/44 (9%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK----RPWL 445
+ VEF VV GEKG EAA VTGP GEPV+GS +AADK RPW+
Sbjct: 110 EVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFRPWM 153
>UniRef50_O13015 Cluster: Y box protein 2; n=1; Carassius
auratus|Rep: Y box protein 2 - Carassius auratus
(Goldfish)
Length = 297
Score = 96.3 bits (229), Expect = 3e-19
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 16 VIATGVEGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGD 67
Score = 51.6 bits (118), Expect = 8e-06
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV KG EAA VTGPGG PVKGS YA +KR
Sbjct: 69 EVVEFDVVEAAKGSEAANVTGPGGIPVKGSRYAPNKR 105
>UniRef50_Q9Y2T7 Cluster: Y-box-binding protein 2; n=21;
Tetrapoda|Rep: Y-box-binding protein 2 - Homo sapiens
(Human)
Length = 364
Score = 96.3 bits (229), Expect = 3e-19
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGD
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGD 140
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EA VTGPGG PVKGS YA ++R
Sbjct: 142 ETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 178
>UniRef50_Q90650 Cluster: Rous sarcoma virus transcription enhancer
factor II; n=1; Gallus gallus|Rep: Rous sarcoma virus
transcription enhancer factor II - Gallus gallus
(Chicken)
Length = 298
Score = 95.1 bits (226), Expect = 7e-19
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK + SVGD
Sbjct: 83 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGD 134
Score = 55.2 bits (127), Expect = 7e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 136 ETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 172
>UniRef50_Q90WH1 Cluster: Cold-shock domain protein; n=1; Oryzias
latipes|Rep: Cold-shock domain protein - Oryzias latipes
(Medaka fish) (Japanese ricefish)
Length = 366
Score = 92.7 bits (220), Expect = 4e-18
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 3 VQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGD 49
Score = 51.2 bits (117), Expect = 1e-05
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF V+ KG EAA VTGPGG PVKGS YA +KR
Sbjct: 51 EVVEFDVIEAAKGSEAANVTGPGGIPVKGSRYAPNKR 87
>UniRef50_O62213 Cluster: Putative uncharacterized protein cey-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein cey-1 - Caenorhabditis elegans
Length = 208
Score = 90.6 bits (215), Expect = 1e-17
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V A KV GTVKWFNVK+GYGFINR DT ED+FVHQTAI+ NNP K +RS+GD
Sbjct: 16 VKATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGD 67
Score = 49.2 bits (112), Expect = 4e-05
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +2
Query: 323 DKAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
++ V F +V G KG EAA VTGP G PV+GS YAAD+
Sbjct: 68 NEEVMFDIVEGSKGLEAASVTGPDGGPVQGSKYAADR 104
>UniRef50_Q4H2L8 Cluster: Y-box protein 1/2/3; n=2; Ciona
intestinalis|Rep: Y-box protein 1/2/3 - Ciona
intestinalis (Transparent sea squirt)
Length = 320
Score = 89.8 bits (213), Expect = 3e-17
Identities = 36/52 (69%), Positives = 46/52 (88%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A SG VKWFNV++GYGF+NR+D KEDVF+HQTAI++NNP+K +RSVGD
Sbjct: 21 VLASHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGD 72
Score = 58.4 bits (135), Expect = 7e-08
Identities = 29/40 (72%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = +2
Query: 332 VEFAVVAGEKGF-EAAGVTGPGGEPVKGSPYAADKRPWLP 448
VEF VV GEKG EAA VTGP GEPVKGS YAAD+R + P
Sbjct: 76 VEFDVVEGEKGLPEAANVTGPNGEPVKGSKYAADRRRYKP 115
>UniRef50_UPI0000DC0B82 Cluster: UPI0000DC0B82 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0B82 UniRef100 entry -
Rattus norvegicus
Length = 147
Score = 77.8 bits (183), Expect = 1e-13
Identities = 37/52 (71%), Positives = 41/52 (78%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV G V WFNV++GY FINRNDTKED FVHQT I +NNP K + SVGD
Sbjct: 91 VIAMKVLGIVTWFNVRNGYVFINRNDTKEDTFVHQTVIKKNNP-KYLHSVGD 141
>UniRef50_Q9XSU1 Cluster: DNA binding protein; n=3; Amniota|Rep: DNA
binding protein - Canis familiaris (Dog)
Length = 96
Score = 76.2 bits (179), Expect = 3e-13
Identities = 33/39 (84%), Positives = 37/39 (94%)
Frame = +3
Query: 204 NVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
NV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 1 NVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 39
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ V+F VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 41 ETVQFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 77
>UniRef50_UPI00015B4254 Cluster: PREDICTED: similar to Y-box protein
Ct-p40; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to Y-box protein Ct-p40 - Nasonia vitripennis
Length = 335
Score = 75.8 bits (178), Expect = 4e-13
Identities = 36/52 (69%), Positives = 40/52 (76%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
+IA KV+GTVKWFNVKSGYGFINR+ D+FV Q I N P KAVRSVGD
Sbjct: 64 IIANKVTGTVKWFNVKSGYGFINRSVFHFDIFVCQRCISNNLPSKAVRSVGD 115
Score = 60.9 bits (141), Expect = 1e-08
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EAA VTGP GE VKGSPYAADKR
Sbjct: 117 EVVEFDVVIGEKGNEAANVTGPDGEAVKGSPYAADKR 153
>UniRef50_UPI0000DC0B3F Cluster: UPI0000DC0B3F related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0B3F UniRef100 entry -
Rattus norvegicus
Length = 292
Score = 73.7 bits (173), Expect = 2e-12
Identities = 36/52 (69%), Positives = 42/52 (80%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GT+K V +G G INRNDTKEDVFVHQTA+ +N+PRK +RSVGD
Sbjct: 26 VIATKVLGTMKCSIVWNGCGLINRNDTKEDVFVHQTAMKKNDPRKYLRSVGD 77
Score = 43.6 bits (98), Expect = 0.002
Identities = 21/36 (58%), Positives = 24/36 (66%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF V GEK EAA VTG GG PV+ S Y AD+
Sbjct: 79 ETVEFDFVEGEKDVEAASVTGLGGVPVQDSKYTADR 114
>UniRef50_Q52KT6 Cluster: MGC115344 protein; n=2; Xenopus|Rep:
MGC115344 protein - Xenopus laevis (African clawed frog)
Length = 221
Score = 73.3 bits (172), Expect = 2e-12
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRN 287
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQ A N
Sbjct: 31 VLATKVQGTVKWFNVRNGYGFINRNDTKEDVFVHQGAEAAN 71
Score = 40.7 bits (91), Expect = 0.016
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +2
Query: 359 KGFEAAGVTGPGGEPVKGSPYAADKR 436
+G EAA VTGP G PV+GS YAAD+R
Sbjct: 65 QGAEAANVTGPKGAPVQGSRYAADRR 90
>UniRef50_Q23960 Cluster: Y-box protein; n=2; Dugesia|Rep: Y-box
protein - Dugesia japonica (Planarian)
Length = 266
Score = 71.7 bits (168), Expect = 7e-12
Identities = 28/47 (59%), Positives = 39/47 (82%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
++G VKWFNVK GYGF+ RND +ED+F+HQ+AIV++NP +SVG+
Sbjct: 29 ITGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGE 75
Score = 32.3 bits (70), Expect = 5.4
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2
Query: 338 FAVVAGEKGFEAAGVTGPGGEPVKGSPYA 424
F +V G KG EAA V+ G+ VKGS YA
Sbjct: 81 FDIVKGAKGNEAANVSAIDGKCVKGSEYA 109
>UniRef50_Q17JD9 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 192
Score = 66.5 bits (155), Expect = 3e-10
Identities = 25/50 (50%), Positives = 38/50 (76%)
Frame = +3
Query: 171 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
+++++GTVKWFN K G+GFI R+DT ED+FVH++ I + N +S+GD
Sbjct: 31 SKRITGTVKWFNAKDGFGFITRHDTGEDIFVHKSCIFKPNRNHFTKSIGD 80
Score = 34.3 bits (75), Expect = 1.3
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 356 EKGFEAAGVTGPGGEPVKGSPYAADK 433
E G A+ VTGPG +PVKGSP+ A +
Sbjct: 85 EFGLIASKVTGPGFKPVKGSPFVAKR 110
>UniRef50_A4V6J7 Cluster: Y-Box factor protein; n=1; Dugesia
japonica|Rep: Y-Box factor protein - Dugesia japonica
(Planarian)
Length = 178
Score = 62.1 bits (144), Expect = 6e-09
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
G VKW+NVK GYGFI+R+D EDVFVHQ+AI R P K +S+G+
Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQ-KSLGE 48
Score = 38.7 bits (86), Expect = 0.063
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 323 DKAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYA 424
D+ V F VV G KG EA VTGP G+ V GS +A
Sbjct: 49 DEDVLFDVVKGSKGNEAMNVTGPNGDAVLGSKFA 82
>UniRef50_Q75QN8 Cluster: Cold shock domain protein 3; n=2; Triticum
aestivum|Rep: Cold shock domain protein 3 - Triticum
aestivum (Wheat)
Length = 231
Score = 56.0 bits (129), Expect = 4e-07
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+ E+V GTVKWFNV G+GFI+ +D ED+FVHQ+AI
Sbjct: 1 MGERVKGTVKWFNVTKGFGFISPDDGGEDLFVHQSAI 37
>UniRef50_P91306 Cluster: Y-box protein 2; n=2; Caenorhabditis
elegans|Rep: Y-box protein 2 - Caenorhabditis elegans
Length = 267
Score = 55.6 bits (128), Expect = 5e-07
Identities = 25/52 (48%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRK-AVRSVGD 320
I + G VKW++V YGFI+RND ++D+FVHQTAI ++ K +R++GD
Sbjct: 62 ITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGD 113
Score = 36.7 bits (81), Expect = 0.25
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +2
Query: 323 DKAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPY 421
D+ V F +V G+ G EAA VTGP G+ V GS Y
Sbjct: 114 DEEVLFDLVEGKNGPEAANVTGPNGDNVIGSRY 146
>UniRef50_UPI00006A28C0 Cluster: Y-box-binding protein 2 (Germ
cell-specific Y-box-binding protein) (Contrin) (MSY2
homolog).; n=1; Xenopus tropicalis|Rep: Y-box-binding
protein 2 (Germ cell-specific Y-box-binding protein)
(Contrin) (MSY2 homolog). - Xenopus tropicalis
Length = 199
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EAA VTGPGG PVKGS +A ++R
Sbjct: 88 ETVEFDVVEGEKGAEAANVTGPGGVPVKGSRFAPNRR 124
Score = 33.1 bits (72), Expect = 3.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 192 VKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V W+ + G ++ + + TAI RNNPRK +RSVGD
Sbjct: 45 VPWYPMGRGV-HLHGGGARASLIGWDTAIKRNNPRKFLRSVGD 86
>UniRef50_A7RV03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 671
Score = 51.6 bits (118), Expect = 8e-06
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+G+VKWFN+ G+GFI R+D EDVFVHQ+AI
Sbjct: 484 TGSVKWFNLIKGFGFITRDDGGEDVFVHQSAI 515
>UniRef50_Q2RQP4 Cluster: Cold-shock DNA-binding domain protein;
n=1; Rhodospirillum rubrum ATCC 11170|Rep: Cold-shock
DNA-binding domain protein - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 70
Score = 50.8 bits (116), Expect = 1e-05
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRK----AVRSVGDMIRRW 335
+GTVKWFNV+ G+GFI +D D FVH +A+ R++ R R D RRW
Sbjct: 3 TGTVKWFNVQKGFGFIAPDDGGSDAFVHISAVERSSDRSPPGYRCRESRDRKRRW 57
>UniRef50_P0A981 Cluster: Cold shock-like protein cspG; n=154;
Bacteria|Rep: Cold shock-like protein cspG - Shigella
flexneri
Length = 70
Score = 50.8 bits (116), Expect = 1e-05
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPR 296
++ K++G VKWFN G+GFI +D +DVFVH TAI N R
Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFR 43
>UniRef50_UPI00015BD510 Cluster: UPI00015BD510 related cluster; n=1;
unknown|Rep: UPI00015BD510 UniRef100 entry - unknown
Length = 86
Score = 50.0 bits (114), Expect = 3e-05
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRN 287
++GTVKWF+ + GYGF+ R+D + DVFVH +AI N
Sbjct: 18 ITGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPN 53
>UniRef50_UPI0000DC181B Cluster: UPI0000DC181B related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC181B UniRef100 entry -
Rattus norvegicus
Length = 210
Score = 50.0 bits (114), Expect = 3e-05
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +3
Query: 204 NVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
++++ YG++ +N + DVFVHQTAI +NNPRK + + GD
Sbjct: 37 SLRNIYGYVGKNSSGNDVFVHQTAIKKNNPRKYLHTTGD 75
Score = 39.9 bits (89), Expect = 0.027
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 427
+ VEF V+ GEK EAA + GPGG V+GS YAA
Sbjct: 77 ETVEFDVIEGEKDAEAANIIGPGG--VQGSQYAA 108
>UniRef50_Q4JMV8 Cluster: Predicted cold shock family protein; n=1;
uncultured bacterium BAC17H8|Rep: Predicted cold shock
family protein - uncultured bacterium BAC17H8
Length = 83
Score = 50.0 bits (114), Expect = 3e-05
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
GTVKWFN + GYGFIN ++ DVFVH TA+
Sbjct: 18 GTVKWFNTQKGYGFINPDEDGNDVFVHITAV 48
>UniRef50_A3BPB0 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 238
Score = 50.0 bits (114), Expect = 3e-05
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = +3
Query: 171 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+E+V GTVKWF+ G+GFI +D ED+FVHQ+++
Sbjct: 3 SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSL 38
>UniRef50_Q7D268 Cluster: AGR_C_161p; n=7; Proteobacteria|Rep:
AGR_C_161p - Agrobacterium tumefaciens (strain C58 /
ATCC 33970)
Length = 163
Score = 49.6 bits (113), Expect = 3e-05
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
+GTVKWFN GYGFI +D +DVFVH +A+ R
Sbjct: 97 TGTVKWFNATKGYGFIQPDDGSQDVFVHISAVER 130
>UniRef50_A1L2L1 Cluster: LOC100036881 protein; n=1; Xenopus
laevis|Rep: LOC100036881 protein - Xenopus laevis
(African clawed frog)
Length = 131
Score = 49.2 bits (112), Expect = 4e-05
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
K++GT KWFN + GYGF+ +D D+FVHQ+ I
Sbjct: 3 KLTGTCKWFNAEKGYGFLTPDDGSPDIFVHQSTI 36
Score = 32.3 bits (70), Expect = 5.4
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 332 VEFAVVAGEKG--FEAAGVTGPGGEPVKGSP 418
VEF+V+ E+ +AA VTGP G V+G+P
Sbjct: 50 VEFSVITDERSGKLKAADVTGPNGAAVRGAP 80
>UniRef50_Q9Z3S6 Cluster: Cold shock protein cspA; n=59;
Alphaproteobacteria|Rep: Cold shock protein cspA -
Rhizobium meliloti (Sinorhizobium meliloti)
Length = 69
Score = 49.2 bits (112), Expect = 4e-05
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAV 305
SGTVKWFN G+GFI +D DVFVH +A+ R R V
Sbjct: 3 SGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLV 43
>UniRef50_Q2S0T4 Cluster: Conserved domain protein; n=2;
Bacteroidetes/Chlorobi group|Rep: Conserved domain
protein - Salinibacter ruber (strain DSM 13855)
Length = 110
Score = 48.8 bits (111), Expect = 6e-05
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRS 311
+ TVKWF+ K GYGFI+ D EDVFVH + I ++ K ++S
Sbjct: 3 TSTVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKS 45
>UniRef50_P39818 Cluster: Cold shock-like protein cspJ; n=7;
Bacteria|Rep: Cold shock-like protein cspJ - Salmonella
typhimurium
Length = 70
Score = 48.8 bits (111), Expect = 6e-05
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPR 296
K++G VKWFN + G+GFI D +DVFVH +AI N R
Sbjct: 4 KITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFR 43
>UniRef50_Q9XTJ6 Cluster: Putative uncharacterized protein cey-4;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein cey-4 - Caenorhabditis elegans
Length = 294
Score = 48.4 bits (110), Expect = 8e-05
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRN---DTKEDVFVHQTAIVRNNPRK 299
VI V G VKWF+V+ YGF+ R+ D ED FVHQTAI +++ K
Sbjct: 84 VIETGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIK 131
Score = 41.1 bits (92), Expect = 0.012
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +2
Query: 323 DKAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYA 424
D+ V F +V G KG EAA VTGP GE V+GS +A
Sbjct: 140 DEPVVFDIVEGLKGPEAANVTGPDGENVRGSRFA 173
>UniRef50_A4VMZ2 Cluster: Cold shock protein CspA; n=12;
Bacteria|Rep: Cold shock protein CspA - Pseudomonas
stutzeri (strain A1501)
Length = 136
Score = 48.0 bits (109), Expect = 1e-04
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
V+AE+ +GTVKWFN GYGFI R + DVFVH AI
Sbjct: 67 VMAERETGTVKWFNDAKGYGFIQRGN-GADVFVHYRAI 103
>UniRef50_P0A975 Cluster: Cold shock-like protein cspE; n=28;
Bacteria|Rep: Cold shock-like protein cspE - Shigella
flexneri
Length = 69
Score = 48.0 bits (109), Expect = 1e-04
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRN 287
K+ G VKWFN G+GFI D +DVFVH +AI N
Sbjct: 3 KIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTN 39
>UniRef50_Q6N3M1 Cluster: Cold shock DNA binding protein; n=78;
Bacteria|Rep: Cold shock DNA binding protein -
Rhodopseudomonas palustris
Length = 84
Score = 47.6 bits (108), Expect = 1e-04
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
GTVKWFN GYGFI +D DVFVH +A+ R
Sbjct: 18 GTVKWFNATKGYGFIQPDDGGNDVFVHISAVER 50
>UniRef50_Q1GQL9 Cluster: Cold-shock DNA-binding domain protein;
n=30; Proteobacteria|Rep: Cold-shock DNA-binding domain
protein - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 249
Score = 47.6 bits (108), Expect = 1e-04
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +3
Query: 174 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
E+ SGTVK+FN G+GFI R+D + D FVH +A+ R
Sbjct: 179 ERTSGTVKFFNTTKGFGFIARDDGQADAFVHISAVQR 215
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
GTVK+FN G+GF+ R+D EDVFVH +A+
Sbjct: 86 GTVKFFNPSKGFGFVARDDGGEDVFVHISAV 116
>UniRef50_O65639 Cluster: Glycine-rich protein; n=8;
Magnoliophyta|Rep: Glycine-rich protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 299
Score = 47.6 bits (108), Expect = 1e-04
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +3
Query: 171 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGDMI 326
A + +G V WFN GYGFI +D ++FVHQ++IV R +VGD +
Sbjct: 8 AARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSL--TVGDAV 57
>UniRef50_A5BWB0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 189
Score = 47.6 bits (108), Expect = 1e-04
Identities = 19/36 (52%), Positives = 29/36 (80%)
Frame = +3
Query: 171 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+++ +GTVKWF+ + G+GFI +D ED+FVHQT+I
Sbjct: 4 SKRSTGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSI 39
>UniRef50_A4RZ32 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 106
Score = 47.6 bits (108), Expect = 1e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+A + G VKWFN G+GFI +D E++FVHQT I
Sbjct: 1 MATRARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGI 37
>UniRef50_Q3Y013 Cluster: Cold-shock protein, DNA-binding; n=6;
cellular organisms|Rep: Cold-shock protein, DNA-binding
- Enterococcus faecium DO
Length = 35
Score = 46.8 bits (106), Expect = 2e-04
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
+GTVKWFN + G+GFI+R D DVFVH +AI R
Sbjct: 3 NGTVKWFNAEKGFGFISRED-GSDVFVHFSAIPR 35
>UniRef50_P0A9Y2 Cluster: Cold shock protein cspA; n=39;
Gammaproteobacteria|Rep: Cold shock protein cspA -
Salmonella typhimurium
Length = 70
Score = 46.8 bits (106), Expect = 2e-04
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
K++G VKWFN G+GFI +D +DVFVH +AI
Sbjct: 4 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAI 37
>UniRef50_A3YF52 Cluster: Cold-shock protein, DNA-binding; n=2;
Marinomonas|Rep: Cold-shock protein, DNA-binding -
Marinomonas sp. MED121
Length = 79
Score = 46.4 bits (105), Expect = 3e-04
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIV 281
+ +K+ GTVKWFN G GFI R D + DVFVH +IV
Sbjct: 1 MTDKLKGTVKWFNDSKGVGFIQR-DNEADVFVHYKSIV 37
>UniRef50_Q83RI9 Cluster: Cold shock-like protein cspC; n=38;
Gammaproteobacteria|Rep: Cold shock-like protein cspC -
Shigella flexneri
Length = 69
Score = 46.4 bits (105), Expect = 3e-04
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRN 287
K+ G VKWFN G+GFI D +DVFVH +AI N
Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGN 39
>UniRef50_A5NZH6 Cluster: Putative cold-shock DNA-binding domain
protein precursor; n=1; Methylobacterium sp. 4-46|Rep:
Putative cold-shock DNA-binding domain protein precursor
- Methylobacterium sp. 4-46
Length = 242
Score = 46.0 bits (104), Expect = 4e-04
Identities = 17/36 (47%), Positives = 28/36 (77%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
++SGTVKW++ G+GF++ D +DVFVH++A+ R
Sbjct: 175 EMSGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALAR 210
Score = 37.9 bits (84), Expect = 0.11
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 189 TVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
TVKWFN + G+GF+ D D F+H A+
Sbjct: 65 TVKWFNKEKGFGFVELGDGSGDAFLHIRAV 94
>UniRef50_Q38896 Cluster: Glycine-rich protein 2b; n=26; cellular
organisms|Rep: Glycine-rich protein 2b - Arabidopsis
thaliana (Mouse-ear cress)
Length = 201
Score = 46.0 bits (104), Expect = 4e-04
Identities = 17/35 (48%), Positives = 27/35 (77%)
Frame = +3
Query: 174 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
++ GTVKWF+ + G+GFI +D +D+FVHQ++I
Sbjct: 13 DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSI 47
>UniRef50_Q1N1Z0 Cluster: Cold shock protein; n=14; Bacteria|Rep:
Cold shock protein - Oceanobacter sp. RED65
Length = 171
Score = 45.6 bits (103), Expect = 5e-04
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
G VKWFNVK G+GFI R D EDVFVH +I
Sbjct: 108 GLVKWFNVKKGFGFITR-DNGEDVFVHFRSI 137
>UniRef50_Q08VT0 Cluster: Conserved domain protein; n=2;
Bacteria|Rep: Conserved domain protein - Stigmatella
aurantiaca DW4/3-1
Length = 100
Score = 45.6 bits (103), Expect = 5e-04
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+GTVKWFN G+GFI ++ EDVF H TAI
Sbjct: 36 TGTVKWFNDAKGFGFITQDGGGEDVFCHHTAI 67
>UniRef50_A7DA86 Cluster: Putative cold-shock DNA-binding domain
protein; n=3; Methylobacterium extorquens PA1|Rep:
Putative cold-shock DNA-binding domain protein -
Methylobacterium extorquens PA1
Length = 69
Score = 45.6 bits (103), Expect = 5e-04
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
+GTVKWFN GYGFI ++ +DVFVH +A+ R
Sbjct: 3 TGTVKWFNETKGYGFIQPDNGGKDVFVHISAVER 36
>UniRef50_A0YCJ0 Cluster: Cold-shock DNA-binding protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Cold-shock
DNA-binding protein - marine gamma proteobacterium
HTCC2143
Length = 144
Score = 45.6 bits (103), Expect = 5e-04
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVR 308
GTVKWFNV GYGF+ R + E++FVH +I N RK +R
Sbjct: 79 GTVKWFNVSKGYGFVTR-ASGEEIFVHFRSI-SGNGRKVLR 117
>UniRef50_Q1RLA8 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 193
Score = 45.6 bits (103), Expect = 5e-04
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFI---NRNDTKEDVFVHQTAIVRNNPRKAVRSVGDMIRRWSLPWLPG 356
G KWFN K GYGFI + K DVFVHQ++I R GD ++ W P G
Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSL--QEGDRVKFWYKPSKKG 86
Query: 357 RKA 365
+A
Sbjct: 87 LEA 89
Score = 31.9 bits (69), Expect = 7.2
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 332 VEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRP 439
V+F +KG EA V GPGGE + G+ RP
Sbjct: 76 VKFWYKPSKKGLEAVKVVGPGGEKLVGAERTKKSRP 111
>UniRef50_A1CFX7 Cluster: Cold shock NA binding domain protein; n=2;
cellular organisms|Rep: Cold shock NA binding domain
protein - Aspergillus clavatus
Length = 125
Score = 45.6 bits (103), Expect = 5e-04
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +3
Query: 174 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRN 287
E+ +GTVKWFN + GYGFI +T ED+FVH A+ N
Sbjct: 58 ERQNGTVKWFNDEKGYGFIT-PETGEDLFVHFRAVEGN 94
>UniRef50_P54584 Cluster: Cold shock protein; n=6; Bacteria|Rep:
Cold shock protein - Arthrobacter globiformis
Length = 67
Score = 45.6 bits (103), Expect = 5e-04
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
GTVKWFN + G+GFI +D+ DVFVH + I
Sbjct: 4 GTVKWFNAEKGFGFITPDDSDGDVFVHYSEI 34
>UniRef50_P0A363 Cluster: Cold shock-like protein cspB; n=367;
root|Rep: Cold shock-like protein cspB - Yersinia
enterocolitica
Length = 70
Score = 45.6 bits (103), Expect = 5e-04
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNN 290
++ K++G VKWF+ G+GFI+ D +DVFVH +AI N+
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGND 41
>UniRef50_UPI000155640A Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 502
Score = 45.2 bits (102), Expect = 7e-04
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINR 236
V+A +V GTVKWFNV++GYGFINR
Sbjct: 56 VLATQVLGTVKWFNVRNGYGFINR 79
>UniRef50_Q9ZFK9 Cluster: CspA; n=25; Bacteria|Rep: CspA -
Myxococcus xanthus
Length = 68
Score = 45.2 bits (102), Expect = 7e-04
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+GTVKWFN G+GFI ++D DVF H TAI
Sbjct: 3 TGTVKWFNDAKGFGFIAQDDGGADVFCHHTAI 34
>UniRef50_Q1ZKE8 Cluster: Cold shock protein; n=3;
Gammaproteobacteria|Rep: Cold shock protein - Vibrio
angustum S14
Length = 68
Score = 45.2 bits (102), Expect = 7e-04
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
K++GTVKWFN G+GFI+ D K DVFVH +AI
Sbjct: 3 KLTGTVKWFNDDKGFGFISGTDGK-DVFVHFSAI 35
>UniRef50_Q9AN51 Cluster: ID534; n=52; Bacteria|Rep: ID534 -
Bradyrhizobium japonicum
Length = 120
Score = 44.8 bits (101), Expect = 0.001
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
GTVKWFN GYGF+ +D +DVFVH +A+
Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAV 86
>UniRef50_Q8D046 Cluster: Cold shock protein; n=14;
Enterobacteriaceae|Rep: Cold shock protein - Yersinia
pestis
Length = 77
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGDM 323
G VKWFN GYGFI+ +D DV+V++TAI N K++ D+
Sbjct: 14 GRVKWFNQSEGYGFISPHDGGSDVYVNKTAIA-NTKNKSLNEGQDV 58
>UniRef50_Q0BPU3 Cluster: Cold shock protein; n=1; Granulibacter
bethesdensis CGDNIH1|Rep: Cold shock protein -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 100
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
GTVKWFN GYGFI + ++DVFVH +A+ R
Sbjct: 35 GTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQR 67
>UniRef50_Q016S2 Cluster: Putative nucleic acid binding protein;
n=1; Ostreococcus tauri|Rep: Putative nucleic acid
binding protein - Ostreococcus tauri
Length = 125
Score = 44.4 bits (100), Expect = 0.001
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
G VKWFN G+G+I +D + DVFVHQ+A+
Sbjct: 13 GKVKWFNCTKGFGYITPDDGEPDVFVHQSAL 43
>UniRef50_Q8KES2 Cluster: Cold shock-like protein CspG; n=9;
Chlorobiaceae|Rep: Cold shock-like protein CspG -
Chlorobium tepidum
Length = 97
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +3
Query: 192 VKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGDM 323
VKWF+ K GYGFI D ED+FVH ++I+ + K + D+
Sbjct: 6 VKWFDGKKGYGFILNPDGGEDIFVHFSSIISDQSFKVLNQDADV 49
>UniRef50_Q2J4H7 Cluster: Cold-shock DNA-binding domain protein;
n=13; Bacteria|Rep: Cold-shock DNA-binding domain
protein - Frankia sp. (strain CcI3)
Length = 67
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIV 281
GTVKWFN + G+GFI+ + DVFVH ++IV
Sbjct: 4 GTVKWFNAEKGFGFISVDGGGPDVFVHYSSIV 35
>UniRef50_Q8GI47 Cluster: Cold shock protein homolog; n=5;
Deinococci|Rep: Cold shock protein homolog - Thermus
thermophilus
Length = 73
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
G VKWFN + GYGFI R + DVFVH TAI
Sbjct: 4 GRVKWFNAEKGYGFIER-EGDTDVFVHYTAI 33
>UniRef50_Q2BKV8 Cluster: Cold-shock domain family protein; n=3;
Bacteria|Rep: Cold-shock domain family protein -
Neptuniibacter caesariensis
Length = 149
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 174 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVH 266
++ GTVKWFNV G+GFI R + +DVFVH
Sbjct: 81 DREQGTVKWFNVSKGFGFITRGE-DDDVFVH 110
>UniRef50_A4BC11 Cluster: Cold shock protein; n=1; Reinekea sp.
MED297|Rep: Cold shock protein - Reinekea sp. MED297
Length = 153
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 174 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
++ G VKWFNV G+GF+ R D EDVFVH +I
Sbjct: 84 DREEGLVKWFNVSKGFGFVTR-DNGEDVFVHFRSI 117
>UniRef50_Q2LZN5 Cluster: GA14466-PA; n=3; Endopterygota|Rep:
GA14466-PA - Drosophila pseudoobscura (Fruit fly)
Length = 168
Score = 44.0 bits (99), Expect = 0.002
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
G KWFNV G+GF+ ND ++VFVHQ+ I
Sbjct: 23 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVI 53
>UniRef50_Q9VRN5 Cluster: Lin-28 homolog; n=1; Drosophila
melanogaster|Rep: Lin-28 homolog - Drosophila
melanogaster (Fruit fly)
Length = 195
Score = 44.0 bits (99), Expect = 0.002
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
G KWFNV G+GF+ ND ++VFVHQ+ I
Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVI 71
>UniRef50_P39158 Cluster: Cold shock protein cspC; n=41;
Bacteria|Rep: Cold shock protein cspC - Bacillus
subtilis
Length = 66
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
GTVKWFN + G+GFI R + +DVFVH +AI
Sbjct: 4 GTVKWFNAEKGFGFIER-ENGDDVFVHFSAI 33
>UniRef50_P72366 Cluster: Cold shock-like protein cspA; n=29;
Bacteria|Rep: Cold shock-like protein cspA - Stigmatella
aurantiaca
Length = 68
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+GTVKWFN G+GFI ++ EDVF H +AI
Sbjct: 3 TGTVKWFNDAKGFGFITQDGGGEDVFCHHSAI 34
>UniRef50_Q8YIC6 Cluster: COLD SHOCK PROTEIN CSPA; n=4;
Brucella|Rep: COLD SHOCK PROTEIN CSPA - Brucella
melitensis
Length = 101
Score = 43.6 bits (98), Expect = 0.002
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
+GTVKWFN G+GFI + DVFVH +A+ R
Sbjct: 35 TGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQR 68
>UniRef50_Q87NH9 Cluster: Cold shock transcriptional regulator CspA;
n=21; Bacteria|Rep: Cold shock transcriptional regulator
CspA - Vibrio parahaemolyticus
Length = 70
Score = 43.6 bits (98), Expect = 0.002
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIV 281
++ K +G+VKWFN G+GFI+ + ED+FVH +IV
Sbjct: 1 MSNKSTGSVKWFNETKGFGFISPENGGEDLFVHFQSIV 38
>UniRef50_A3YG84 Cluster: Cold-shock protein CspD; n=1; Marinomonas
sp. MED121|Rep: Cold-shock protein CspD - Marinomonas
sp. MED121
Length = 92
Score = 43.6 bits (98), Expect = 0.002
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIV 281
GTVKWFN GYGFI +ED+F+H ++I+
Sbjct: 4 GTVKWFNNAKGYGFIVSESFEEDLFIHYSSIL 35
>UniRef50_P92186 Cluster: Protein lin-28; n=5; Caenorhabditis|Rep:
Protein lin-28 - Caenorhabditis elegans
Length = 227
Score = 43.6 bits (98), Expect = 0.002
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQT 272
G+ KWFNV GYGF+ + T ED+FVHQ+
Sbjct: 55 GSCKWFNVSKGYGFVIDDITGEDLFVHQS 83
>UniRef50_P62169 Cluster: Cold shock-like protein cspC; n=26;
cellular organisms|Rep: Cold shock-like protein cspC -
Bacillus anthracis
Length = 65
Score = 43.6 bits (98), Expect = 0.002
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+ G VKWFN + G+GFI R D +DVFVH +AI
Sbjct: 1 MQGRVKWFNAEKGFGFIERED-GDDVFVHFSAI 32
>UniRef50_P72188 Cluster: Cold shock protein capA; n=23;
Proteobacteria|Rep: Cold shock protein capA -
Pseudomonas fragi
Length = 64
Score = 43.6 bits (98), Expect = 0.002
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
++++ SGTVKWFN + G+GFI +D+FVH AI
Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPQGGGDDLFVHFKAI 37
>UniRef50_Q5NP11 Cluster: Cold shock protein; n=1; Zymomonas
mobilis|Rep: Cold shock protein - Zymomonas mobilis
Length = 174
Score = 43.2 bits (97), Expect = 0.003
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 189 TVKWFNVKSGYGFINRNDTKEDVFVHQTA 275
TVKWFN GYGF+ RN ++D+FVH A
Sbjct: 108 TVKWFNRTKGYGFLIRNADQQDIFVHAEA 136
Score = 32.3 bits (70), Expect = 5.4
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVH 266
++G VKWF++ G+GF+ + + D+ +H
Sbjct: 13 ITGYVKWFDIIKGFGFLIGSKGEGDILIH 41
>UniRef50_Q2JGE4 Cluster: Cold-shock DNA-binding domain protein;
n=9; Bacteria|Rep: Cold-shock DNA-binding domain protein
- Frankia sp. (strain CcI3)
Length = 67
Score = 43.2 bits (97), Expect = 0.003
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
GTVKWFN + G+GFI+ + DVFVH +AI
Sbjct: 4 GTVKWFNSEKGFGFISVDGGGSDVFVHYSAI 34
>UniRef50_Q9ZFK8 Cluster: CspB; n=4; cellular organisms|Rep: CspB -
Myxococcus xanthus
Length = 66
Score = 43.2 bits (97), Expect = 0.003
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
GTVKWFN G+GFI D EDVF H TAI
Sbjct: 4 GTVKWFNDAKGFGFI-AQDNGEDVFCHHTAI 33
>UniRef50_Q11D48 Cluster: Cold-shock DNA-binding domain protein;
n=11; Proteobacteria|Rep: Cold-shock DNA-binding domain
protein - Mesorhizobium sp. (strain BNC1)
Length = 69
Score = 43.2 bits (97), Expect = 0.003
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAV 305
GTVK+FN G+GFI +D DVFVH +A+ R R V
Sbjct: 4 GTVKFFNATKGFGFIQPDDGAADVFVHISAVERAGMRTIV 43
>UniRef50_A6E2L2 Cluster: Cold-shock DNA-binding domain protein;
n=19; Bacteria|Rep: Cold-shock DNA-binding domain
protein - Roseovarius sp. TM1035
Length = 68
Score = 43.2 bits (97), Expect = 0.003
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
+GTVKWFN G+GFI ++ +DVFVH +A+ R
Sbjct: 3 NGTVKWFNSTKGFGFIAPDNGGKDVFVHISAVER 36
>UniRef50_A5ZXC4 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Ruminococcus obeum ATCC 29174
Length = 66
Score = 43.2 bits (97), Expect = 0.003
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
GTVKWFN + GYGFI D DVFVH +AI
Sbjct: 4 GTVKWFNAEKGYGFITGED-GADVFVHFSAI 33
>UniRef50_Q4UBG6 Cluster: Cold shock protein, putative; n=2;
Theileria|Rep: Cold shock protein, putative - Theileria
annulata
Length = 95
Score = 43.2 bits (97), Expect = 0.003
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+++G KWFN K GYGFI + EDVFVHQ+ I
Sbjct: 3 RLNGVCKWFNNKKGYGFITL-ENGEDVFVHQSEI 35
>UniRef50_Q0YRJ0 Cluster: Cold-shock protein, DNA-binding; n=1;
Chlorobium ferrooxidans DSM 13031|Rep: Cold-shock
protein, DNA-binding - Chlorobium ferrooxidans DSM 13031
Length = 70
Score = 42.7 bits (96), Expect = 0.004
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIV 281
V+G VKWF+V+ G+GFI + ED+FVH + IV
Sbjct: 2 VNGKVKWFDVRKGFGFILNPNGGEDIFVHFSNIV 35
>UniRef50_Q0SKK0 Cluster: Cold shock protein; n=20; Bacteria|Rep:
Cold shock protein - Rhodococcus sp. (strain RHA1)
Length = 119
Score = 42.7 bits (96), Expect = 0.004
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPR 296
+GTV+WFN + G+GF+ D +D+FVH + I + R
Sbjct: 55 TGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHR 92
>UniRef50_Q5CVY2 Cluster: Cold shock RNA binding domain of the OB
fold; n=2; Cryptosporidium|Rep: Cold shock RNA binding
domain of the OB fold - Cryptosporidium parvum Iowa II
Length = 135
Score = 42.7 bits (96), Expect = 0.004
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+SG KWF+ G+GFI +D ED+FVHQ I
Sbjct: 11 LSGVCKWFDSTKGFGFITPDDGSEDIFVHQQNI 43
>UniRef50_Q89E28 Cluster: Cold shock protein; n=8; cellular
organisms|Rep: Cold shock protein - Bradyrhizobium
japonicum
Length = 67
Score = 42.3 bits (95), Expect = 0.005
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
GTVKWFN GYGFI +DVFVH +A+
Sbjct: 5 GTVKWFNPTKGYGFIQPASGGKDVFVHISAV 35
>UniRef50_Q28L70 Cluster: Cold-shock DNA-binding domain protein;
n=11; Bacteria|Rep: Cold-shock DNA-binding domain
protein - Jannaschia sp. (strain CCS1)
Length = 68
Score = 42.3 bits (95), Expect = 0.005
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRN 287
+GTVKWFN G+GFI +DVFVH +A+ R+
Sbjct: 3 NGTVKWFNSTKGFGFIAPETGGKDVFVHISAVERS 37
>UniRef50_Q1QAP9 Cluster: Cold-shock DNA-binding domain protein;
n=5; cellular organisms|Rep: Cold-shock DNA-binding
domain protein - Psychrobacter cryohalolentis (strain
K5)
Length = 71
Score = 42.3 bits (95), Expect = 0.005
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
++ + G VKWFN G+GFI R D+ ED+FVH AI
Sbjct: 1 MSAREQGIVKWFNDSKGFGFIQR-DSGEDIFVHFRAI 36
>UniRef50_Q5JKD6 Cluster: Cold shock domain protein 2-like protein;
n=3; Oryza sativa|Rep: Cold shock domain protein 2-like
protein - Oryza sativa subsp. japonica (Rice)
Length = 221
Score = 42.3 bits (95), Expect = 0.005
Identities = 15/38 (39%), Positives = 28/38 (73%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+++E+V G VK F+ +G+ FI +D ED+F+HQ+++
Sbjct: 1 MVSERVKGMVKGFDATNGFSFITPDDGSEDLFIHQSSL 38
>UniRef50_Q9S1B7 Cluster: Cold shock-like protein cspA; n=10;
Bacteria|Rep: Cold shock-like protein cspA - Shewanella
violacea
Length = 70
Score = 42.3 bits (95), Expect = 0.005
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+++ +GTVKWFN G+GF+ +++ DVFVH AI
Sbjct: 1 MSDSNTGTVKWFNEDKGFGFLTQDNGGADVFVHFRAI 37
>UniRef50_Q9I0L6 Cluster: Cold-shock protein CspD; n=12;
Gammaproteobacteria|Rep: Cold-shock protein CspD -
Pseudomonas aeruginosa
Length = 90
Score = 41.9 bits (94), Expect = 0.007
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+SG VKWFN GYGFI ED+F H +AI
Sbjct: 2 LSGKVKWFNNAKGYGFILAEGRDEDLFAHYSAI 34
>UniRef50_Q5GRS9 Cluster: Cold shock protein; n=3; Wolbachia|Rep:
Cold shock protein - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 84
Score = 41.9 bits (94), Expect = 0.007
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPR 296
G +KWFN + GYGFI D+FVH + + R+ R
Sbjct: 4 GNIKWFNAEKGYGFIKPEANGNDIFVHISTLERSGIR 40
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 41.9 bits (94), Expect = 0.007
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGDMI 326
++GTV W+N G GFIN + +DVFVH +A+ + + K V+ GDM+
Sbjct: 2 LTGTVIWYNPVKGLGFINPDQGGDDVFVHMSAL-KASGLKVVKE-GDML 48
>UniRef50_A4U251 Cluster: Cold shock DNA-binding domain protein;
n=3; Magnetospirillum|Rep: Cold shock DNA-binding domain
protein - Magnetospirillum gryphiswaldense
Length = 209
Score = 41.9 bits (94), Expect = 0.007
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
V V+ TVKWFN G+GF+ +D D F+H +A+ R
Sbjct: 47 VTQTNVTATVKWFNASKGFGFVAPSDGTPDAFLHISALER 86
Score = 39.5 bits (88), Expect = 0.036
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +3
Query: 171 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRN 287
+E V G VK+F+ + G+GF+ + +DVFVH A+ R+
Sbjct: 141 SETVEGVVKFFSAEKGFGFVQTDQGGKDVFVHIKALERS 179
>UniRef50_Q2S3Y3 Cluster: 'Cold-shock' DNA-binding domain, putative;
n=1; Salinibacter ruber DSM 13855|Rep: 'Cold-shock'
DNA-binding domain, putative - Salinibacter ruber
(strain DSM 13855)
Length = 69
Score = 41.5 bits (93), Expect = 0.009
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+GTVKWF+ GYGF+ ++ ++DVF+H + +
Sbjct: 3 TGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEV 34
>UniRef50_Q9ZCP9 Cluster: Cold shock-like protein cspA; n=12;
Bacteria|Rep: Cold shock-like protein cspA - Rickettsia
prowazekii
Length = 70
Score = 41.5 bits (93), Expect = 0.009
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+A + G VKW+N +GFI +++ +DVFVH++AI
Sbjct: 1 MATNIVGKVKWYNSTKNFGFIEQDNGGKDVFVHKSAI 37
>UniRef50_Q982F0 Cluster: Cold-shock protein; n=3; Mesorhizobium
loti|Rep: Cold-shock protein - Rhizobium loti
(Mesorhizobium loti)
Length = 97
Score = 41.1 bits (92), Expect = 0.012
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRN 287
GTVKW+ + G+GFI ++ ++DVFVH + + R+
Sbjct: 33 GTVKWYKPEKGFGFIAPDNGEKDVFVHASTLTRS 66
>UniRef50_Q1FKR2 Cluster: Cold-shock protein, DNA-binding; n=2;
Clostridium|Rep: Cold-shock protein, DNA-binding -
Clostridium phytofermentans ISDg
Length = 70
Score = 41.1 bits (92), Expect = 0.012
Identities = 16/32 (50%), Positives = 25/32 (78%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+GTVKW++ + GYGF++ ND + DVF+H + I
Sbjct: 5 TGTVKWYDSERGYGFVSTNDGR-DVFLHHSQI 35
>UniRef50_Q8I248 Cluster: Cold-shock protein, putative; n=3;
Plasmodium|Rep: Cold-shock protein, putative -
Plasmodium falciparum (isolate 3D7)
Length = 150
Score = 41.1 bits (92), Expect = 0.012
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 174 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRN 287
+K++G V F+ + GYGFI ND D+FVH T I ++
Sbjct: 28 DKITGNVIMFDKRKGYGFIKPNDGGPDIFVHYTDICQS 65
>UniRef50_Q82ZV8 Cluster: Cold-shock domain family protein; n=7;
cellular organisms|Rep: Cold-shock domain family protein
- Enterococcus faecalis (Streptococcus faecalis)
Length = 67
Score = 40.7 bits (91), Expect = 0.016
Identities = 22/39 (56%), Positives = 24/39 (61%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRK 299
+GTVK FN K GYGFI D E +FVHQT I RK
Sbjct: 3 TGTVKSFNHKRGYGFIIAEDGSE-IFVHQTGICMPGFRK 40
>UniRef50_Q74BX3 Cluster: Cold shock domain family protein; n=13;
cellular organisms|Rep: Cold shock domain family protein
- Geobacter sulfurreducens
Length = 66
Score = 40.7 bits (91), Expect = 0.016
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
G VKWFN G+GFI + D EDVFVH +AI
Sbjct: 4 GRVKWFNDAKGFGFIEQ-DNGEDVFVHFSAI 33
>UniRef50_Q1GT29 Cluster: Cold-shock DNA-binding domain protein;
n=1; Sphingopyxis alaskensis|Rep: Cold-shock DNA-binding
domain protein - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 90
Score = 40.7 bits (91), Expect = 0.016
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
GTVK+FN GYGFI D D FVH TA+
Sbjct: 26 GTVKFFNNDKGYGFIENEDGSGDSFVHITAV 56
>UniRef50_A3Y9L0 Cluster: Cold-shock DNA-binding domain protein;
n=2; Marinomonas|Rep: Cold-shock DNA-binding domain
protein - Marinomonas sp. MED121
Length = 97
Score = 40.7 bits (91), Expect = 0.016
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
VSG VKWFN + G+GFI R + DVFVH AI
Sbjct: 33 VSGIVKWFNDEKGFGFIER-EGGPDVFVHFRAI 64
>UniRef50_Q9PA96 Cluster: Temperature acclimation protein B; n=24;
Bacteria|Rep: Temperature acclimation protein B -
Xylella fastidiosa
Length = 85
Score = 40.3 bits (90), Expect = 0.021
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRN 287
GTVKWFN G+GFI N+ D+FVH AI N
Sbjct: 23 GTVKWFNDNKGFGFITSNN-GPDLFVHYRAIQGN 55
>UniRef50_Q8G880 Cluster: Cold shock protein; n=3;
Bifidobacterium|Rep: Cold shock protein -
Bifidobacterium longum
Length = 79
Score = 40.3 bits (90), Expect = 0.021
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
GTVK+F K G+GFI +D EDVFVH I
Sbjct: 4 GTVKFFLAKKGFGFIQPDDGGEDVFVHYAEI 34
>UniRef50_Q5FNZ7 Cluster: Cold shock protein; n=1; Gluconobacter
oxydans|Rep: Cold shock protein - Gluconobacter oxydans
(Gluconobacter suboxydans)
Length = 96
Score = 40.3 bits (90), Expect = 0.021
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
+GTVKWFN G+GFI ++ +D FVH + + R
Sbjct: 31 TGTVKWFNSTKGFGFIQPDNGGQDAFVHISELER 64
>UniRef50_Q013V8 Cluster: Glycogen debranching enzyme; n=1;
Ostreococcus tauri|Rep: Glycogen debranching enzyme -
Ostreococcus tauri
Length = 141
Score = 40.3 bits (90), Expect = 0.021
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 192 VKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
V WFN GYG++ +D EDVFVHQ+ +
Sbjct: 44 VTWFNCVRGYGYVRPHDGSEDVFVHQSEL 72
>UniRef50_Q1RHK6 Cluster: Cold shock-like protein cspA; n=2;
Rickettsia bellii RML369-C|Rep: Cold shock-like protein
cspA - Rickettsia bellii (strain RML369-C)
Length = 70
Score = 40.3 bits (90), Expect = 0.021
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+ G VKWFN +GFI + + +DVFVH++A+
Sbjct: 5 IVGKVKWFNPTKNFGFIEQENGGKDVFVHRSAV 37
>UniRef50_Q9KXN2 Cluster: Cold shock protein B; n=7; Bacteria|Rep:
Cold shock protein B - Streptomyces coelicolor
Length = 127
Score = 39.9 bits (89), Expect = 0.027
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+G VKWFN + G+GF++R+D DVFVH + +
Sbjct: 3 TGKVKWFNSEKGFGFLSRDD-GGDVFVHSSVL 33
>UniRef50_Q6FAY9 Cluster: Cold shock-like protein; n=44;
Bacteria|Rep: Cold shock-like protein - Acinetobacter
sp. (strain ADP1)
Length = 69
Score = 39.9 bits (89), Expect = 0.027
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVH 266
++ V+GTVKWFN G+GFI + D+ DVF H
Sbjct: 1 MSNSVNGTVKWFNEVKGFGFI-QQDSGPDVFAH 32
>UniRef50_Q60AQ4 Cluster: Cold shock protein; n=27; Bacteria|Rep:
Cold shock protein - Methylococcus capsulatus
Length = 69
Score = 39.9 bits (89), Expect = 0.027
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
++++ GTVKWFN G+GFI R + D+FVH +I
Sbjct: 1 MSQQQQGTVKWFNESKGFGFIQR-ENGSDLFVHFRSI 36
>UniRef50_Q4F6X8 Cluster: Cold shock protein; n=6;
Gammaproteobacteria|Rep: Cold shock protein -
Pseudomonas fluorescens
Length = 69
Score = 39.9 bits (89), Expect = 0.027
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVH 266
++ + +GTVKWFN + G+GFI +D+FVH
Sbjct: 1 MSNRQTGTVKWFNDEKGFGFITPQGGGDDLFVH 33
>UniRef50_A5V9E9 Cluster: Putative cold-shock DNA-binding domain
protein; n=1; Sphingomonas wittichii RW1|Rep: Putative
cold-shock DNA-binding domain protein - Sphingomonas
wittichii RW1
Length = 198
Score = 39.9 bits (89), Expect = 0.027
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +3
Query: 171 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAV 305
AE V G VKWF+ G+GFI + + DV VH +++R++ R+ +
Sbjct: 31 AETVVGAVKWFDATRGFGFIATDGDRGDVLVH-FSVLRDHGRRTL 74
Score = 38.7 bits (86), Expect = 0.063
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 192 VKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
VKWFN GYGF+ R+ +D+F+H + R
Sbjct: 137 VKWFNRLKGYGFLVRDGETQDIFIHMETVRR 167
>UniRef50_A3VSH0 Cluster: Cold shock protein; n=1; Parvularcula
bermudensis HTCC2503|Rep: Cold shock protein -
Parvularcula bermudensis HTCC2503
Length = 173
Score = 39.9 bits (89), Expect = 0.027
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 189 TVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
TVKWF+ GYGF+ + ED+FVH +
Sbjct: 108 TVKWFSRAKGYGFLTATNANEDIFVHMEVV 137
Score = 35.1 bits (77), Expect = 0.77
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 171 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+ ++ G VKWF+ GYGFI DV +H + +
Sbjct: 11 SREIRGFVKWFDQTKGYGFITDEAGGRDVLIHSSCL 46
>UniRef50_A3UBK6 Cluster: Cold-shock DNA-binding domain protein;
n=8; Bacteroidetes|Rep: Cold-shock DNA-binding domain
protein - Croceibacter atlanticus HTCC2559
Length = 64
Score = 39.9 bits (89), Expect = 0.027
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIV 281
+GTVK+FN G+GFI T E+ FVH T ++
Sbjct: 3 TGTVKFFNDTKGFGFIKEEGTNEEHFVHVTGLI 35
>UniRef50_Q835L0 Cluster: Cold-shock domain family protein; n=24;
Bacteria|Rep: Cold-shock domain family protein -
Enterococcus faecalis (Streptococcus faecalis)
Length = 66
Score = 39.5 bits (88), Expect = 0.036
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+GTVKWFN G+GFI + DVFVH +AI
Sbjct: 3 TGTVKWFNSDKGFGFITA-ENGNDVFVHFSAI 33
>UniRef50_Q834D5 Cluster: Cold-shock domain family protein; n=1;
Enterococcus faecalis|Rep: Cold-shock domain family
protein - Enterococcus faecalis (Streptococcus faecalis)
Length = 68
Score = 39.5 bits (88), Expect = 0.036
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
G VKWF+ + GYGFI N+ ++++FVH TAI
Sbjct: 4 GIVKWFDNRKGYGFIVYNE-EDEIFVHFTAI 33
>UniRef50_Q0C0S6 Cluster: Cold shock DNA-binding protein; n=1;
Hyphomonas neptunium ATCC 15444|Rep: Cold shock
DNA-binding protein - Hyphomonas neptunium (strain ATCC
15444)
Length = 175
Score = 39.5 bits (88), Expect = 0.036
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 189 TVKWFNVKSGYGFINRNDTKEDVFVHQTA 275
T+KWFN GYGF+ R+ + D+FVH A
Sbjct: 112 TLKWFNRTRGYGFVLRDGQETDIFVHAVA 140
>UniRef50_A5ZS66 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 75
Score = 39.5 bits (88), Expect = 0.036
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRK 299
++E + GTVKWF+ + GYGFI D D F H + I + RK
Sbjct: 1 MSETLQGTVKWFSAQKGYGFITGED-GIDYFAHFSEIQMDGYRK 43
>UniRef50_A4A3Y7 Cluster: Cold-shock domain family protein; n=1;
Congregibacter litoralis KT71|Rep: Cold-shock domain
family protein - Congregibacter litoralis KT71
Length = 189
Score = 39.5 bits (88), Expect = 0.036
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPR 296
GTVKWFN G+GFI R + +++FVH +I+ R
Sbjct: 126 GTVKWFNGTKGFGFIIR-ENGDEIFVHHRSIIGEGRR 161
>UniRef50_A3J3Q2 Cluster: Cold shock protein; n=7;
Flavobacteriales|Rep: Cold shock protein - Flavobacteria
bacterium BAL38
Length = 66
Score = 39.5 bits (88), Expect = 0.036
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+G VK+FN GYGFI ++T +D+FVH + +
Sbjct: 3 TGKVKFFNESKGYGFITDDETGKDIFVHASGM 34
>UniRef50_A2TNS0 Cluster: Cold shock protein; n=4;
Bacteroidetes|Rep: Cold shock protein - Dokdonia
donghaensis MED134
Length = 82
Score = 39.5 bits (88), Expect = 0.036
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
G VK+FN K G+GFI +++ E+VFVH T +
Sbjct: 21 GKVKFFNTKKGFGFIAIDNSDEEVFVHTTNV 51
>UniRef50_P0A971 Cluster: Cold shock-like protein cspD; n=12;
Gammaproteobacteria|Rep: Cold shock-like protein cspD -
Shigella flexneri
Length = 74
Score = 39.5 bits (88), Expect = 0.036
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPR--KAVRSV 314
GTVKWFN G+GFI ED+F H + I + R KA +SV
Sbjct: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSV 48
>UniRef50_Q6N6T9 Cluster: Cold shock DNA binding protein; n=38;
Alphaproteobacteria|Rep: Cold shock DNA binding protein
- Rhodopseudomonas palustris
Length = 235
Score = 39.1 bits (87), Expect = 0.047
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKA 302
++SG +KWF+ GYGF+ ++ DV +H T + R+ + A
Sbjct: 68 EISGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTA 109
Score = 33.9 bits (74), Expect = 1.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 192 VKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
VKWFN G+GF+ + D+FVH + R
Sbjct: 165 VKWFNRLRGFGFLTCGEGTPDIFVHMETLRR 195
>UniRef50_Q2RNN9 Cluster: Cold-shock DNA-binding domain protein;
n=1; Rhodospirillum rubrum ATCC 11170|Rep: Cold-shock
DNA-binding domain protein - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 210
Score = 39.1 bits (87), Expect = 0.047
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
+ TVKWFN G+GF+ +D + D F+H + + R
Sbjct: 6 TATVKWFNATKGFGFVRVSDGEPDAFLHISVLQR 39
>UniRef50_A7HXE8 Cluster: Putative cold-shock DNA-binding domain
protein; n=1; Parvibaculum lavamentivorans DS-1|Rep:
Putative cold-shock DNA-binding domain protein -
Parvibaculum lavamentivorans DS-1
Length = 199
Score = 39.1 bits (87), Expect = 0.047
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 192 VKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
VKWFN GYGF+ R + D+F+H + R
Sbjct: 138 VKWFNRARGYGFVTRGEGTPDIFIHMETLRR 168
Score = 37.5 bits (83), Expect = 0.14
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
++ +++G VKWF+ GYGFI + +DV VH + +
Sbjct: 34 VSFEITGVVKWFDAVKGYGFIIPENGGDDVLVHLSCL 70
>UniRef50_P0A353 Cluster: Cold shock-like protein cspA; n=288;
Bacteria|Rep: Cold shock-like protein cspA - Bordetella
bronchiseptica (Alcaligenes bronchisepticus)
Length = 67
Score = 39.1 bits (87), Expect = 0.047
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRN 287
+G VKWFN + GYGFI +D+F H + I N
Sbjct: 3 TGVVKWFNAEKGYGFITPEAGGKDLFAHFSEIQAN 37
>UniRef50_Q7NNC3 Cluster: Gsr0488 protein; n=1; Gloeobacter
violaceus|Rep: Gsr0488 protein - Gloeobacter violaceus
Length = 65
Score = 38.7 bits (86), Expect = 0.063
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +3
Query: 192 VKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
V+WF++++GYG I R+DT E+VF+ TAI
Sbjct: 2 VRWFDLQAGYGAIARDDTGEEVFLLFTAI 30
>UniRef50_Q3VJZ1 Cluster: Cold-shock protein, DNA-binding precursor;
n=2; Bacteroidetes/Chlorobi group|Rep: Cold-shock
protein, DNA-binding precursor - Pelodictyon
phaeoclathratiforme BU-1
Length = 91
Score = 38.7 bits (86), Expect = 0.063
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVH 266
+GTVKWFN G+GFI ++ DVFVH
Sbjct: 26 TGTVKWFNKMKGFGFIIPDNGGADVFVH 53
>UniRef50_A4EHC3 Cluster: Cold shock protein; n=1; Roseobacter sp.
CCS2|Rep: Cold shock protein - Roseobacter sp. CCS2
Length = 151
Score = 38.7 bits (86), Expect = 0.063
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFV 263
V+ E++ VKWF+ GYGF+N ED+FV
Sbjct: 80 VLEERIPVRVKWFDPSKGYGFVNAFGCAEDIFV 112
>UniRef50_Q1QLF4 Cluster: Cold-shock DNA-binding domain protein;
n=1; Nitrobacter hamburgensis X14|Rep: Cold-shock
DNA-binding domain protein - Nitrobacter hamburgensis
(strain X14 / DSM 10229)
Length = 68
Score = 38.3 bits (85), Expect = 0.083
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVH 266
+G+VK+FN + GYGFI +D D+F+H
Sbjct: 3 TGSVKFFNAEKGYGFIQPDDGTPDIFLH 30
>UniRef50_A1ZFN2 Cluster: Conserved domain protein; n=2;
Flexibacteraceae|Rep: Conserved domain protein -
Microscilla marina ATCC 23134
Length = 64
Score = 38.3 bits (85), Expect = 0.083
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVH 266
G VK+F GYGFI +DT ED+F H
Sbjct: 4 GVVKFFKEDKGYGFITNSDTGEDIFFH 30
>UniRef50_A4LXQ2 Cluster: Cold-shock DNA-binding domain protein;
n=1; Geobacter bemidjiensis Bem|Rep: Cold-shock
DNA-binding domain protein - Geobacter bemidjiensis Bem
Length = 92
Score = 37.9 bits (84), Expect = 0.11
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +3
Query: 174 EKV--SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
EKV +G VKWFN G+GFI + D DVFVH ++I
Sbjct: 24 EKVMANGVVKWFNDAKGFGFIEQ-DNGVDVFVHFSSI 59
>UniRef50_UPI000150A0B6 Cluster: hypothetical protein
TTHERM_00340170; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00340170 - Tetrahymena
thermophila SB210
Length = 864
Score = 37.5 bits (83), Expect = 0.14
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 174 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVH 266
EK GT+K+F+ YGFI ++++ D+FVH
Sbjct: 617 EKYKGTLKFFDQDKNYGFIVEDESRTDIFVH 647
>UniRef50_UPI0000DD7E8C Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 278
Score = 37.5 bits (83), Expect = 0.14
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = -3
Query: 408 LTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQP 298
LT +PPGP T AA+ PFSP+T+ ++ + + P + P
Sbjct: 235 LTWAPPGPGTLAAASPFSPSTSDSAASAAPPPPGSSP 271
>UniRef50_UPI0000589074 Cluster: PREDICTED: similar to
ENSANGP00000011455; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000011455
- Strongylocentrotus purpuratus
Length = 234
Score = 37.5 bits (83), Expect = 0.14
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 174 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
E G KWF++ YGF+ +D DVFVHQ I
Sbjct: 61 ELYRGKCKWFSLAKCYGFLTPDDGSGDVFVHQRVI 95
>UniRef50_Q6YPQ4 Cluster: Cold shock protein; n=3; Firmicutes|Rep:
Cold shock protein - Onion yellows phytoplasma
Length = 74
Score = 37.5 bits (83), Expect = 0.14
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 174 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+K GT +WF+ GYGFI D K D+FVH ++I
Sbjct: 4 KKQQGTCRWFSKDKGYGFIVSVDGK-DIFVHYSSI 37
>UniRef50_Q5ZWM5 Cluster: Cold shock domain family protein; n=6;
Bacteria|Rep: Cold shock domain family protein -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 87
Score = 37.5 bits (83), Expect = 0.14
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRN 287
+ K+ G VKWFN G+GFI + +D FVH ++I N
Sbjct: 15 MTNKIRGKVKWFNKDKGFGFI--ESSGKDYFVHFSSIQSN 52
>UniRef50_A2U2L8 Cluster: Cold shock protein; n=3;
Bacteroidetes|Rep: Cold shock protein - Polaribacter
dokdonensis MED152
Length = 76
Score = 37.5 bits (83), Expect = 0.14
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIV 281
GTVK+FN G+GFI T ++ FVH + +V
Sbjct: 17 GTVKFFNESKGFGFITEEGTNKEHFVHVSGLV 48
>UniRef50_Q0APJ7 Cluster: Cold-shock DNA-binding domain protein;
n=1; Maricaulis maris MCS10|Rep: Cold-shock DNA-binding
domain protein - Maricaulis maris (strain MCS10)
Length = 174
Score = 37.1 bits (82), Expect = 0.19
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
++ G VKW++ GYGFI+ +D + D+ +H + + R
Sbjct: 15 ELEGRVKWYDPARGYGFIDASDGEGDILLHASCLRR 50
Score = 35.5 bits (78), Expect = 0.58
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 192 VKWFNVKSGYGFINRNDTKEDVFVHQTAIVR 284
VKWF+ GYGF+ ++ + DVF+H + R
Sbjct: 110 VKWFDALRGYGFVTCDNVEGDVFLHAATLRR 140
>UniRef50_A0YBV1 Cluster: CspA-like protein; n=17;
Proteobacteria|Rep: CspA-like protein - marine gamma
proteobacterium HTCC2143
Length = 91
Score = 37.1 bits (82), Expect = 0.19
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+GTVKWFN G+GFI DVF H + I
Sbjct: 3 TGTVKWFNNAKGFGFILPEGGGADVFAHYSTI 34
>UniRef50_P46449 Cluster: Cold shock-like protein cspD; n=31;
Bacteria|Rep: Cold shock-like protein cspD - Haemophilus
influenzae
Length = 72
Score = 37.1 bits (82), Expect = 0.19
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
G VKWFN G+GFI+ D+F H + I
Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVI 34
>UniRef50_Q4S6T5 Cluster: Chromosome 14 SCAF14723, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 14
SCAF14723, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 206
Score = 36.7 bits (81), Expect = 0.25
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 7/42 (16%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIVRN 287
SG KWFNV+ G+GFI+ D DVFVHQ+ RN
Sbjct: 8 SGFCKWFNVRMGFGFISMTHSEGSPVDPPLDVFVHQSVGGRN 49
Score = 33.1 bits (72), Expect = 3.1
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 317 RHDKAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 415
+ + VEF KG E+ VTGPGG P GS
Sbjct: 114 KEGEQVEFTFKKSTKGLESLRVTGPGGGPCAGS 146
>UniRef50_Q0M3I1 Cluster: Cold-shock protein, DNA-binding; n=1;
Caulobacter sp. K31|Rep: Cold-shock protein, DNA-binding
- Caulobacter sp. K31
Length = 201
Score = 36.7 bits (81), Expect = 0.25
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 192 VKWFNVKSGYGFINRNDTKEDVFVH 266
VKWFN GYGF+ R+ D+FVH
Sbjct: 138 VKWFNRTKGYGFVVRDGQPGDIFVH 162
Score = 35.5 bits (78), Expect = 0.58
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKE----DVFVHQTAIVRNNPRK 299
++SG VKWF+ GYGFI +D + DV +H T++ RN R+
Sbjct: 17 RISGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSL-RNCGRE 60
>UniRef50_Q28PH1 Cluster: Cold-shock DNA-binding domain protein;
n=6; Rhodobacterales|Rep: Cold-shock DNA-binding domain
protein - Jannaschia sp. (strain CCS1)
Length = 181
Score = 36.3 bits (80), Expect = 0.33
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRN 287
V+ VKWF+ G+GF N EDVFVH + R+
Sbjct: 113 VAARVKWFDKAKGFGFANVFGHSEDVFVHVEVLRRS 148
Score = 34.7 bits (76), Expect = 1.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
I V+G VKWF+ G+GF+ ++ D+ +H +
Sbjct: 18 ICPTVAGVVKWFDTTKGFGFVLSDEGGPDILLHANVL 54
>UniRef50_Q1AWL7 Cluster: Cold-shock DNA-binding domain protein;
n=3; Bacteria|Rep: Cold-shock DNA-binding domain protein
- Rubrobacter xylanophilus (strain DSM 9941 / NBRC
16129)
Length = 197
Score = 36.3 bits (80), Expect = 0.33
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 171 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+++ G VKWF+ + GYGF+ R ED+FVH + +
Sbjct: 131 SQREQGRVKWFDPEKGYGFLVR-PGGEDLFVHHSEV 165
>UniRef50_Q0I3L0 Cluster: Cold shock-like protein; n=2;
Proteobacteria|Rep: Cold shock-like protein -
Haemophilus somnus (strain 129Pt) (Histophilus somni
(strain 129Pt))
Length = 69
Score = 36.3 bits (80), Expect = 0.33
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
G VKWFN G+GF++ + DVF H + I
Sbjct: 4 GIVKWFNNAKGFGFLSVESSDVDVFAHYSVI 34
>UniRef50_Q7VLQ6 Cluster: Cold shock-like protein CspD; n=6;
Proteobacteria|Rep: Cold shock-like protein CspD -
Haemophilus ducreyi
Length = 68
Score = 35.9 bits (79), Expect = 0.44
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPR 296
G VKWFN G+GFI + + D+F H + I ++ R
Sbjct: 4 GIVKWFNNVKGFGFITCDTVEGDIFAHFSEIKQDGYR 40
>UniRef50_Q2RWM8 Cluster: Cold-shock DNA-binding domain protein;
n=1; Rhodospirillum rubrum ATCC 11170|Rep: Cold-shock
DNA-binding domain protein - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 68
Score = 35.9 bits (79), Expect = 0.44
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPR 296
++GT+ WF+ +GYGFI +D D+ V A+ R+ R
Sbjct: 2 LTGTITWFDTINGYGFIRPDDGGGDIAVDMPALDRSGLR 40
>UniRef50_Q9ZAH1 Cluster: Cold shock protein C; n=10;
Streptococcaceae|Rep: Cold shock protein C - Lactococcus
lactis
Length = 66
Score = 35.9 bits (79), Expect = 0.44
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRK 299
G + WFN GYGFI +D +DVF + +I N+ +K
Sbjct: 4 GKINWFNADKGYGFIMADD-MQDVFAYLLSIQGNDFKK 40
>UniRef50_Q6SK65 Cluster: Peptide synthetase; n=5; cellular
organisms|Rep: Peptide synthetase - Arthrobacter
aurescens
Length = 1407
Score = 35.9 bits (79), Expect = 0.44
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGDMIR 329
+G + V G++NR+D E VF+ +RNNP + GD+ R
Sbjct: 387 TGEIGLAGVGLAKGYVNRDDLTEKVFIPDFLAIRNNPSARIYRTGDLGR 435
>UniRef50_Q1VQ89 Cluster: Cold shock protein; n=8;
Bacteroidetes|Rep: Cold shock protein - Psychroflexus
torquis ATCC 700755
Length = 63
Score = 35.9 bits (79), Expect = 0.44
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIV 281
GTVK+FN G+GFI +D FVH + ++
Sbjct: 4 GTVKFFNDTKGFGFITEEGVDKDHFVHASGLI 35
>UniRef50_Q9HSS3 Cluster: Cold shock protein; n=7;
Halobacteriaceae|Rep: Cold shock protein - Halobacterium
salinarium (Halobacterium halobium)
Length = 74
Score = 35.9 bits (79), Expect = 0.44
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVH 266
+G V +FN GYGFI D EDVF H
Sbjct: 13 TGEVDFFNDTGGYGFIETEDADEDVFFH 40
>UniRef50_UPI00006CB81E Cluster: conserved hypothetical protein;
n=1; Tetrahymena thermophila SB210|Rep: conserved
hypothetical protein - Tetrahymena thermophila SB210
Length = 1152
Score = 35.5 bits (78), Expect = 0.58
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 174 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVH 266
EK G +K+F+ + +GF N ++ + DVFVH
Sbjct: 878 EKKKGRLKFFDTSNNFGFFNLDEDQSDVFVH 908
>UniRef50_Q9KI38 Cluster: Ysb; n=2; Agrobacterium tumefaciens|Rep:
Ysb - Agrobacterium tumefaciens
Length = 100
Score = 35.5 bits (78), Expect = 0.58
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+G VKWF+ +GFI +D DVF+H ++I
Sbjct: 3 TGKVKWFDATKRFGFITPDDGGPDVFLHLSSI 34
>UniRef50_Q1B3F5 Cluster: Cold-shock DNA-binding domain protein;
n=13; Actinomycetales|Rep: Cold-shock DNA-binding domain
protein - Mycobacterium sp. (strain MCS)
Length = 147
Score = 35.5 bits (78), Expect = 0.58
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+G VKW++ + G+GF+++ D EDV+V +A+
Sbjct: 14 TGRVKWYDAEKGFGFLSQED-GEDVYVRSSAL 44
>UniRef50_Q6ZN17 Cluster: Lin-28 homolog B; n=40; Coelomata|Rep:
Lin-28 homolog B - Homo sapiens (Human)
Length = 250
Score = 35.5 bits (78), Expect = 0.58
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 278
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 69
Score = 33.9 bits (74), Expect = 1.8
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 317 RHDKAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 415
+ + VEF KG E+ VTGPGG P GS
Sbjct: 78 KEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
>UniRef50_Q4FUZ6 Cluster: Possible guanine-specific ribonuclease
with a cold-shock DNA-binding domain; n=2;
Psychrobacter|Rep: Possible guanine-specific
ribonuclease with a cold-shock DNA-binding domain -
Psychrobacter arcticum
Length = 247
Score = 35.1 bits (77), Expect = 0.77
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNP 293
SG +K +N GYGFI+ ++ EDVF H ++ P
Sbjct: 3 SGKIKHWNSDKGYGFIDVDNQSEDVFFHIKSVQMAQP 39
>UniRef50_Q1GHI4 Cluster: Cold-shock DNA-binding domain protein;
n=19; Rhodobacterales|Rep: Cold-shock DNA-binding domain
protein - Silicibacter sp. (strain TM1040)
Length = 179
Score = 35.1 bits (77), Expect = 0.77
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 174 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAV 305
+ V G VKWF+ GYGFI D D+ +H ++RN + +V
Sbjct: 9 QHVRGLVKWFDPAKGYGFIVCPDDGPDILLH-VNVLRNFGQSSV 51
Score = 33.1 bits (72), Expect = 3.1
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 192 VKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRS 311
VKWF+ G+GF N EDVF+H ++R + V+S
Sbjct: 108 VKWFDKAKGFGFANVFGRDEDVFLH-VEVLRQSGLSDVQS 146
>UniRef50_A0BFX7 Cluster: Chromosome undetermined scaffold_105,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_105,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 383
Score = 35.1 bits (77), Expect = 0.77
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 174 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQ 269
E+V G +K++N YGF + K+D+FVHQ
Sbjct: 299 ERVIGYLKFYNESKQYGFFLDDKNKKDIFVHQ 330
>UniRef50_Q4P6X3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 495
Score = 35.1 bits (77), Expect = 0.77
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -3
Query: 459 NIGGGSHGRLSAA*GEPLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQPYVGC 286
N S R S+ + SP PV PA+S P+SPAT A+ L + S + C
Sbjct: 98 NAARTSSARSSSVSSTGPSTSPTAPVAPASSSPYSPATPASLAGLGTTQLSPDIMLRC 155
>UniRef50_Q6F7A1 Cluster: Putative cold shock protein; n=2;
Acinetobacter|Rep: Putative cold shock protein -
Acinetobacter sp. (strain ADP1)
Length = 208
Score = 34.7 bits (76), Expect = 1.0
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 192 VKWFNVKSGYGFINRNDT-KEDVFVHQTAIVRNNPRKAV 305
V+WF+ K GYGFI ND+ K VF+H R PR V
Sbjct: 8 VEWFDDK-GYGFIQPNDSQKGRVFLHIRDFARKGPRPIV 45
>UniRef50_Q6ALH9 Cluster: Hypothetical cold-shock protein; n=1;
Desulfotalea psychrophila|Rep: Hypothetical cold-shock
protein - Desulfotalea psychrophila
Length = 204
Score = 34.7 bits (76), Expect = 1.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSV 314
GT+K +N + GYGFI ++ DVF+H A + R + V
Sbjct: 4 GTIKHWNDEKGYGFITPDNGGNDVFLHIKAFKKRPHRPEIGQV 46
>UniRef50_Q5YVF2 Cluster: Putative cold shock protein; n=1; Nocardia
farcinica|Rep: Putative cold shock protein - Nocardia
farcinica
Length = 122
Score = 34.7 bits (76), Expect = 1.0
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
GTV WF+ + G+GFI +D VFV AI
Sbjct: 54 GTVAWFDAEKGFGFITPDDRSPAVFVEFHAI 84
>UniRef50_O33052 Cluster: Small cold-shock protein; n=7;
Corynebacterineae|Rep: Small cold-shock protein -
Mycobacterium leprae
Length = 136
Score = 34.7 bits (76), Expect = 1.0
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+G VKW++ G+GF+++ D EDV+V +A+
Sbjct: 3 TGKVKWYDADKGFGFLSQED-GEDVYVRSSAL 33
>UniRef50_Q4AG52 Cluster: Cold-shock protein, DNA-binding; n=3;
Bacteroidetes/Chlorobi group|Rep: Cold-shock protein,
DNA-binding - Chlorobium phaeobacteroides BS1
Length = 149
Score = 34.7 bits (76), Expect = 1.0
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIV 281
+G V +FN G+GFI +T+E VFVH ++
Sbjct: 88 NGVVTFFNETKGFGFIRDLETQESVFVHVNNLI 120
>UniRef50_A0Z255 Cluster: Cold shock protein, CspA family-like
protein; n=1; marine gamma proteobacterium HTCC2080|Rep:
Cold shock protein, CspA family-like protein - marine
gamma proteobacterium HTCC2080
Length = 138
Score = 34.7 bits (76), Expect = 1.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVH 266
G +KWFN G+GFI +D E VFVH
Sbjct: 76 GNIKWFNATKGFGFIVGDDGAE-VFVH 101
>UniRef50_Q48H64 Cluster: Cold shock domain protein CspD; n=7;
Proteobacteria|Rep: Cold shock domain protein CspD -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 94
Score = 34.3 bits (75), Expect = 1.3
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRN-DTKEDVFVHQTAI 278
++G VKWFN GYGFI ++ +D+F H + I
Sbjct: 4 LNGKVKWFNNAKGYGFIIKDGKPDDDLFAHFSTI 37
>UniRef50_Q1AY27 Cluster: Cold-shock DNA-binding domain protein;
n=1; Rubrobacter xylanophilus DSM 9941|Rep: Cold-shock
DNA-binding domain protein - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 69
Score = 34.3 bits (75), Expect = 1.3
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
G VKWF+ + G+GFI ++ E+V VH T I
Sbjct: 4 GRVKWFSGEKGFGFI-ETESGEEVLVHYTEI 33
>UniRef50_A2UVR3 Cluster: Cold-shock DNA-binding domain protein;
n=1; Shewanella putrefaciens 200|Rep: Cold-shock
DNA-binding domain protein - Shewanella putrefaciens 200
Length = 149
Score = 34.3 bits (75), Expect = 1.3
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGDMI 326
++ G VKWF+V G+GFI D + H + ++ + A+ +GD +
Sbjct: 2 RIQGVVKWFSVPQGFGFITSITEGTDHYFHVSDVIGS----ALPEIGDKV 47
>UniRef50_A0VF81 Cluster: Putative uncharacterized protein; n=4;
Proteobacteria|Rep: Putative uncharacterized protein -
Delftia acidovorans SPH-1
Length = 1679
Score = 34.3 bits (75), Expect = 1.3
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 462 GNIGGGSHGRLSAA*GEPLTGSPPGPVTPAASKPFS--PATTANSTALSCRRPSAQP 298
G++G G G S + +PP P+ PA+ K S P A + +L RP A P
Sbjct: 1376 GSVGRGGAGSSSLLLAAAIRPTPPAPIRPASRKSLSTEPPAAAAALSLVTIRPRASP 1432
>UniRef50_A7PXK7 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 227
Score = 34.3 bits (75), Expect = 1.3
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -3
Query: 429 SAA*GEPLTGSPPGPVTPAASKPFSPATTANST 331
SA+ P T SP PVTP S P SP T S+
Sbjct: 121 SASPSSPPTSSPASPVTPPTSSPASPVTAPTSS 153
>UniRef50_P81622 Cluster: Cold shock protein CspSt; n=6;
Streptococcus thermophilus|Rep: Cold shock protein CspSt
- Streptococcus thermophilus
Length = 21
Score = 34.3 bits (75), Expect = 1.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRND 242
+GTVKWFN + G+GFI D
Sbjct: 2 NGTVKWFNAEKGFGFITSED 21
>UniRef50_UPI0000EBC7F6 Cluster: PREDICTED: similar to ALR-like
protein; n=1; Bos taurus|Rep: PREDICTED: similar to
ALR-like protein - Bos taurus
Length = 2082
Score = 33.9 bits (74), Expect = 1.8
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -3
Query: 411 PLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQPYVGCYGRWQSDAQTH 253
P+ PP P A +P P+ + T L C P QP + + D QT+
Sbjct: 1756 PVPSEPPQLAGPEAPEPTGPSLPSGETGLLCAEPEVQPPGRDFTQGTPDQQTY 1808
>UniRef50_A3X5Q6 Cluster: Putative uncharacterized protein; n=1;
Roseobacter sp. MED193|Rep: Putative uncharacterized
protein - Roseobacter sp. MED193
Length = 463
Score = 33.9 bits (74), Expect = 1.8
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
+ G +K F G+GFI + EDVF H T + ++ R AV + D
Sbjct: 1 MQGKIKAFIHDKGFGFIEVDGQSEDVFFHITTVKDSSVRCAVGEIVD 47
>UniRef50_Q2N059 Cluster: Elicitin-like protein SOL1E; n=1;
Phytophthora sojae|Rep: Elicitin-like protein SOL1E -
Phytophthora sojae
Length = 200
Score = 33.9 bits (74), Expect = 1.8
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 462 GNIGGGSHGRLSAA*GEPLTGSPPGPVTPAASK-PFSPATTANSTA 328
G++GGG S A +P T SP P T +ASK P + A T ++ A
Sbjct: 142 GDVGGGGSATKSPATSKPRTNSPANPRTGSASKAPGNEAPTLSTCA 187
>UniRef50_A4QQ53 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 266
Score = 33.9 bits (74), Expect = 1.8
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -3
Query: 396 PPGPVTPAASKPFSPATTANSTALSCRRPSAQPYVGCYGRWQSDAQTHLPWC 241
PPGP T ++ P S +T+ ST+ + RPS G G + WC
Sbjct: 195 PPGPSTSTSTVPSSSTSTSTSTSTTVPRPSNASTNGSTGTNYGPCCSDYGWC 246
>UniRef50_P0A985 Cluster: Cold shock-like protein cspH; n=24;
Enterobacteriaceae|Rep: Cold shock-like protein cspH -
Shigella flexneri
Length = 70
Score = 33.9 bits (74), Expect = 1.8
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +3
Query: 168 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTA 275
++ K++G VK F+ KSG GFI +D +++V VH +A
Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISA 36
>UniRef50_UPI0000DA1DF3 Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 229
Score = 33.5 bits (73), Expect = 2.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 399 SPPGPVTPAASKPFSPATTANSTALSCRRPSAQPYVGCYG 280
+PPG AA+ P P + AL RRP+ Q + G G
Sbjct: 70 APPGSAAAAAAAPRGPEASCKGPALRTRRPALQSHPGVRG 109
>UniRef50_Q9ZBH4 Cluster: Putative DNA-binding protein; n=2;
Actinomycetales|Rep: Putative DNA-binding protein -
Streptomyces coelicolor
Length = 162
Score = 33.5 bits (73), Expect = 2.4
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRS 311
V+G V F+ GYGFI D EDVF+H ++ P ++VRS
Sbjct: 22 VAGRVVRFDGTRGYGFIAPEDGGEDVFLHVNDLL--IPEESVRS 63
>UniRef50_Q475L4 Cluster: Cold-shock protein, DNA-binding; n=1;
Ralstonia eutropha JMP134|Rep: Cold-shock protein,
DNA-binding - Ralstonia eutropha (strain JMP134)
(Alcaligenes eutrophus)
Length = 195
Score = 33.5 bits (73), Expect = 2.4
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVH 266
++SGT+K +N G+GFI ++ D+FVH
Sbjct: 11 RISGTLKSWNKDKGFGFIAPSNGGRDIFVH 40
>UniRef50_Q2RZT3 Cluster: Conserved domain protein; n=2;
Salinibacter ruber DSM 13855|Rep: Conserved domain
protein - Salinibacter ruber (strain DSM 13855)
Length = 75
Score = 33.5 bits (73), Expect = 2.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
G +K+F+ G+GFI D EDVF+H I
Sbjct: 4 GKLKFFDTSRGFGFIEPLDGSEDVFLHANNI 34
>UniRef50_Q9RBP7 Cluster: Cold shock protein 7.4; n=2;
Rhodococcus|Rep: Cold shock protein 7.4 - Rhodococcus
sp. 7/1
Length = 57
Score = 33.5 bits (73), Expect = 2.4
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 195 KWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+W+N + G+G + +D +D FVH TA+
Sbjct: 3 RWYNAEKGFGCLTPDDGSKDCFVHFTAL 30
>UniRef50_Q1YTJ3 Cluster: Cold shock protein; n=1; gamma
proteobacterium HTCC2207|Rep: Cold shock protein - gamma
proteobacterium HTCC2207
Length = 89
Score = 33.5 bits (73), Expect = 2.4
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIV 281
+G VKWF+ G+GFI ++ + ++F H I+
Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNII 36
>UniRef50_A5EWK7 Cluster: Cold-shock DNA-binding domain protein;
n=1; Dichelobacter nodosus VCS1703A|Rep: Cold-shock
DNA-binding domain protein - Dichelobacter nodosus
(strain VCS1703A)
Length = 210
Score = 33.5 bits (73), Expect = 2.4
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 174 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPR 296
E +GTV ++N G+GFI+ N+ + +VF H + N R
Sbjct: 9 EICTGTVVYWNDDKGFGFIDTNEKQANVFFHISHFAYENRR 49
>UniRef50_A3WZM6 Cluster: Cold shock DNA binding protein; n=1;
Nitrobacter sp. Nb-311A|Rep: Cold shock DNA binding
protein - Nitrobacter sp. Nb-311A
Length = 77
Score = 33.5 bits (73), Expect = 2.4
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVH 266
K GTV +N + G+GF+ R+ + ++FVH
Sbjct: 9 KYRGTVVHWNAERGFGFVQRDTDQREIFVH 38
>UniRef50_A3PV18 Cluster: Peptidase S1 and S6, chymotrypsin/Hap
precursor; n=1; Mycobacterium sp. JLS|Rep: Peptidase S1
and S6, chymotrypsin/Hap precursor - Mycobacterium sp.
(strain JLS)
Length = 464
Score = 33.5 bits (73), Expect = 2.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 456 IGGGSHGRLSAA*GEPLTGSPPGPVTPAASKPFSPATTANSTA 328
+G H + ++ G P G PP P +PA S P +P+ ++ TA
Sbjct: 400 VGPSPHQQSASGGGGP-AGRPPAPTSPAGSAPSAPSLDSSQTA 441
>UniRef50_Q84NP0 Cluster: Putative uncharacterized protein
P0640E12.104; n=3; Oryza sativa|Rep: Putative
uncharacterized protein P0640E12.104 - Oryza sativa
subsp. japonica (Rice)
Length = 413
Score = 33.5 bits (73), Expect = 2.4
Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = -3
Query: 453 GGGSHGR---LSAA*GEP--LTGSPPGPVTPAASKPFSPATTA 340
GG +HG L AA P + SPP P AA +PFSP TA
Sbjct: 107 GGAAHGGRPPLPAATATPPRMVASPPPPAAIAARRPFSPPVTA 149
>UniRef50_A2XZG9 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 403
Score = 33.5 bits (73), Expect = 2.4
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -3
Query: 414 EPLTGSPPGPVTPAASKPFSPATTANSTALS---CRRPSAQPYVGC 286
+P T + P TPAA+K +PA+T +T RP PY GC
Sbjct: 225 KPATPATTKPTTPAATKTTTPASTKPTTPAPTSFAERPYVCPYDGC 270
>UniRef50_UPI0000EBE251 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 344
Score = 33.1 bits (72), Expect = 3.1
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = -3
Query: 453 GGGSHGRLSAA*GEPLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQPYVGCYGRW 274
GGG GRL+A P G+ PGP +P ++P PA + L RPS V + R
Sbjct: 74 GGGVGGRLAARTAHPERGA-PGPGSPGVAEP--PAQPGVTLLLPAVRPSVAAAVRRFPRA 130
Query: 273 QSDAQTHLP 247
+ P
Sbjct: 131 SEAGRKRCP 139
>UniRef50_UPI0000E47651 Cluster: PREDICTED: similar to rabconnectin;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to rabconnectin - Strongylocentrotus purpuratus
Length = 3216
Score = 33.1 bits (72), Expect = 3.1
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Frame = -3
Query: 435 RLSAA*GEPLTGSPPGPVTPAASKPFSPATTANSTALSCRRP-------SAQPYVGCYGR 277
RLS + P PPG PA +PA T ST + RP SA P++ Y
Sbjct: 2922 RLSKSSSVPFIQLPPGGFNPAFPSDSTPAQTGRSTHVITHRPLYHIRKLSAHPHLPYYLS 2981
Query: 276 WQSDAQTHL 250
+D H+
Sbjct: 2982 GSNDGSVHM 2990
>UniRef50_Q5YVM9 Cluster: Putative uncharacterized protein; n=1;
Nocardia farcinica|Rep: Putative uncharacterized protein
- Nocardia farcinica
Length = 171
Score = 33.1 bits (72), Expect = 3.1
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = +3
Query: 261 VHQTAIVRNN---PRKAVRSVGDMIRRWSLPWLPGR 359
VH+TA + P A R GD RRW L WLP R
Sbjct: 41 VHETAWTMTSDVTPEWACRETGDGPRRWRLSWLPDR 76
>UniRef50_Q2RYB6 Cluster: Helicase-like; n=6; cellular organisms|Rep:
Helicase-like - Rhodospirillum rubrum (strain ATCC 11170
/ NCIB 8255)
Length = 1066
Score = 33.1 bits (72), Expect = 3.1
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 323 DKAVEFAVVAGEKGFEAAGVTGPGGEPVKGS-PYAADKRPWLPPPIFP 463
+ AVE A AGE G EA GP G P K P A + LPP + P
Sbjct: 864 EAAVE-ADRAGEGGEEATAAAGPTGRPAKPEPPQAREGEVHLPPDMLP 910
>UniRef50_A3S070 Cluster: Cold shock protein; n=1; Ralstonia
solanacearum UW551|Rep: Cold shock protein - Ralstonia
solanacearum UW551
Length = 82
Score = 33.1 bits (72), Expect = 3.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVF 260
+GTVKWFN G+GFI + D+F
Sbjct: 45 TGTVKWFNETKGFGFITPDGGGADLF 70
>UniRef50_A0X3F5 Cluster: Cold-shock DNA-binding domain protein;
n=1; Shewanella pealeana ATCC 700345|Rep: Cold-shock
DNA-binding domain protein - Shewanella pealeana ATCC
700345
Length = 205
Score = 33.1 bits (72), Expect = 3.1
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 171 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPR 296
A+ +G + +N G+GFI + K+ VF+H +A +PR
Sbjct: 4 AQVSTGVIDSWNDDKGFGFIQIPEQKQQVFLHISAFASQSPR 45
>UniRef50_A0CIJ2 Cluster: Chromosome undetermined scaffold_19, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_19,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 433
Score = 33.1 bits (72), Expect = 3.1
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVH 266
+G +K+F+ + YGFI ++ K D+FVH
Sbjct: 346 TGRLKFFDEQKNYGFIVMDEDKSDIFVH 373
>UniRef50_Q9T076 Cluster: Early nodulin-like protein 2 precursor;
n=2; Arabidopsis thaliana|Rep: Early nodulin-like
protein 2 precursor - Arabidopsis thaliana (Mouse-ear
cress)
Length = 349
Score = 33.1 bits (72), Expect = 3.1
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 450 GGSHGRLSAA*GEPLTGSPPGPVTPAASKPFSPATT--ANSTALSCRRPSAQP 298
GG+H S++ P T SPPG + P + P SP T+ A + S PS+ P
Sbjct: 182 GGAHSPKSSSAVSPAT-SPPGSMAPKSGSPVSPTTSPPAPPKSTSPVSPSSAP 233
>UniRef50_UPI0000E81A97 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Gallus gallus|Rep: PREDICTED: hypothetical
protein, partial - Gallus gallus
Length = 277
Score = 32.7 bits (71), Expect = 4.1
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -3
Query: 438 GRLSAA*GEPLTGSPPGPVTPAASKPFSPATT--ANSTALSCRRPSAQPYVGCYGRWQSD 265
GRL A P PPGP PAAS PF P ++ A + SCR P G GR ++
Sbjct: 41 GRLPAGRSGPTCSVPPGP-GPAAS-PFRPTSSRPAGVSTSSCRPGHRAPRAG-RGRGEAA 97
Query: 264 AQTHL 250
T L
Sbjct: 98 EPTSL 102
>UniRef50_UPI00006CB6F6 Cluster: ''''Cold-shock'''' DNA-binding
domain containing protein; n=1; Tetrahymena thermophila
SB210|Rep: ''''Cold-shock'''' DNA-binding domain
containing protein - Tetrahymena thermophila SB210
Length = 725
Score = 32.7 bits (71), Expect = 4.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVH 266
G++K+F+ YGFI +D D+FVH
Sbjct: 615 GSLKFFDENKNYGFIVMDDDNRDIFVH 641
>UniRef50_Q69107 Cluster: LAT protein; n=1; Human herpesvirus 2|Rep:
LAT protein - Human herpesvirus 2 (HHV-2) (Human herpes
simplex virus 2)
Length = 119
Score = 32.7 bits (71), Expect = 4.1
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -3
Query: 426 AA*GEPLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQPYVGCYGR--WQSDAQTH 253
A+ G P+ G P P+ S P+SP S A P ++ + G R W+S A T
Sbjct: 38 ASAGGPVGGGFPSGSKPSVSSPYSPWPAGASPAAGA--PCSRDH-GWRDRRPWKSSAPTR 94
Query: 252 LPWCHS 235
+PW S
Sbjct: 95 VPWSKS 100
>UniRef50_Q8BUR5 Cluster: ES cells cDNA, RIKEN full-length enriched
library, clone:C330036H15 product:Hypothetical
cysteine-rich region containing protein, full insert
sequence; n=2; Murinae|Rep: ES cells cDNA, RIKEN
full-length enriched library, clone:C330036H15
product:Hypothetical cysteine-rich region containing
protein, full insert sequence - Mus musculus (Mouse)
Length = 174
Score = 32.7 bits (71), Expect = 4.1
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -3
Query: 417 GEPLTGS-PPGPVTPAASKPFSPATTANSTALSCRRPSAQPYVGCYGRWQSDAQTHLPWC 241
G P T S PP P P + P + + +++ RPS P C+G + +HL
Sbjct: 77 GPPCTCSCPPCPACPPSMCPHTYCVLCSGPSMTYCRPSPCPIYSCHGSQTACRSSHLGCS 136
Query: 240 HSC 232
C
Sbjct: 137 SGC 139
>UniRef50_Q2J4W6 Cluster: ATP-binding region, ATPase-like precursor;
n=1; Frankia sp. CcI3|Rep: ATP-binding region,
ATPase-like precursor - Frankia sp. (strain CcI3)
Length = 516
Score = 32.7 bits (71), Expect = 4.1
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = -3
Query: 453 GGGSHGRLSAA*GEPLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQP 298
G GS L+A G P + +PP PV+ AS P +P +S A + P P
Sbjct: 434 GSGSQRSLTAPRG-PQSAAPPPPVSSNASAPAAPPPPVSSNASAPAAPPPPP 484
>UniRef50_O69918 Cluster: Putative uncharacterized protein SCO6386;
n=1; Streptomyces coelicolor|Rep: Putative
uncharacterized protein SCO6386 - Streptomyces
coelicolor
Length = 127
Score = 32.7 bits (71), Expect = 4.1
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -3
Query: 459 NIGGGSHGRLSAA*GEPLTGSPP-GPVTPAASKPFSPATTANSTALSCRR 313
++ G LSAA EP SPP GP P+ PA T + + C R
Sbjct: 68 DVAAAHRGCLSAAVPEPEAASPPTGPAEPSDEADTPPAATRSGCSKRCTR 117
>UniRef50_Q03YA9 Cluster: Cold shock protein; n=1; Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293|Rep: Cold
shock protein - Leuconostoc mesenteroides subsp.
mesenteroides (strain ATCC 8293 /NCDO 523)
Length = 74
Score = 32.7 bits (71), Expect = 4.1
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+GTVK + + GYG+I ++ +DVFVH I
Sbjct: 3 TGTVKIWQKERGYGYITPDEGGDDVFVHFNGI 34
>UniRef50_A7H6L3 Cluster: Tetratricopeptide TPR_2 repeat protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: Tetratricopeptide
TPR_2 repeat protein - Anaeromyxobacter sp. Fw109-5
Length = 419
Score = 32.7 bits (71), Expect = 4.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 396 PPGPVTPAASKPFSPATTANSTALSCRRPSAQP 298
PP P P+A P +PA A+S + RP P
Sbjct: 20 PPAPTAPSAPNPTAPAARASSAPTAAVRPQGAP 52
>UniRef50_Q9LLC5 Cluster: Ty3 retrotransposon structural protein;
n=1; Secale cereale|Rep: Ty3 retrotransposon structural
protein - Secale cereale (Rye)
Length = 67
Score = 32.7 bits (71), Expect = 4.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 411 PLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQPYVG 289
P T S P PAA ++P T + RR +AQP+VG
Sbjct: 2 PTTNSAPPHTAPAAPLRYAPPTRNGHAGVHDRRLAAQPHVG 42
>UniRef50_A5KAC4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1422
Score = 32.7 bits (71), Expect = 4.1
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = -3
Query: 462 GNIGGGSHGRLSAA*GEPLTGSPPGPVTPAASKPFSPATTANSTALS 322
G+ GGS S + G PL GSP G P+AS+ P A A S
Sbjct: 992 GSPSGGSSSGGSPSGGSPLGGSPSGEQRPSASEVTLPPAGAGKVASS 1038
>UniRef50_Q4P9E2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 966
Score = 32.7 bits (71), Expect = 4.1
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -3
Query: 465 EGNIGGGSHGRLSAA*GEPLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQPYVG 289
EG++ G +H R+S+A P + P PV A+ PAT STA + S VG
Sbjct: 642 EGSVSGLTHSRMSSA---PASSLPAKPVHAVAAVASGPATPKISTAATSPYRSPASVVG 697
>UniRef50_A4QZK3 Cluster: Predicted protein; n=1; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 200
Score = 32.7 bits (71), Expect = 4.1
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = -3
Query: 411 PLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQPYVGCYGRWQSDAQTHLPWCHSC 232
PLT P P TPAA P P TAL +P+ + GR + + H C
Sbjct: 40 PLTRRPATPATPAAPPPPPPTCPTIWTALGAFKPTTDGHCCVEGRSDAAKMDNKDALHCC 99
>UniRef50_UPI0000DA19CE Cluster: PREDICTED: similar to nuclease
sensitive element binding protein 1; n=1; Rattus
norvegicus|Rep: PREDICTED: similar to nuclease sensitive
element binding protein 1 - Rattus norvegicus
Length = 90
Score = 32.3 bits (70), Expect = 5.4
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 356 EKGFEAAGVTGPGGEPVKGSPYAA 427
+KG +A TGPGG PV+G YAA
Sbjct: 6 KKGPDAENDTGPGGAPVQGRKYAA 29
>UniRef50_UPI0000D57810 Cluster: PREDICTED: similar to CG9705-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG9705-PA, isoform A - Tribolium castaneum
Length = 121
Score = 32.3 bits (70), Expect = 5.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 174 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVH 266
+ + G +K F + G+GFI D ED+FVH
Sbjct: 40 QNLYGEIKSFCREKGHGFITPEDGSEDIFVH 70
>UniRef50_Q63708 Cluster: Transcription factor EF1; n=1; Rattus
sp.|Rep: Transcription factor EF1 - Rattus sp
Length = 83
Score = 32.3 bits (70), Expect = 5.4
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = +1
Query: 196 NGSTSRVDMVSSTGMTPRKMCLCIRLP 276
NGST VSSTGMTPRK L RLP
Sbjct: 59 NGSTKGT--VSSTGMTPRKTYLYTRLP 83
>UniRef50_Q5P4M3 Cluster: Probable cold shock family protein; n=1;
Azoarcus sp. EbN1|Rep: Probable cold shock family
protein - Azoarcus sp. (strain EbN1) (Aromatoleum
aromaticum (strain EbN1))
Length = 189
Score = 32.3 bits (70), Expect = 5.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAV 305
++ GT+ +N G+GFI D +VFVH +A R+ R +
Sbjct: 2 RIEGTLGKWNDDRGFGFIVPKDGGPEVFVHVSAFPRDGRRPQI 44
>UniRef50_Q127M7 Cluster: Cold-shock DNA-binding domain protein;
n=1; Polaromonas sp. JS666|Rep: Cold-shock DNA-binding
domain protein - Polaromonas sp. (strain JS666 / ATCC
BAA-500)
Length = 193
Score = 32.3 bits (70), Expect = 5.4
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAV 305
+ GT+K +N + G GFI + +++FVH +A R+ AV
Sbjct: 7 RFDGTLKKWNAERGLGFIVADQGGQEIFVHISAFPRDGRLPAV 49
>UniRef50_A4X7H2 Cluster: Anthranilate synthase component I and
chorismate binding protein; n=2; Salinispora|Rep:
Anthranilate synthase component I and chorismate binding
protein - Salinispora tropica CNB-440
Length = 408
Score = 32.3 bits (70), Expect = 5.4
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -3
Query: 432 LSAA*GEPLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQPYVGCY-GRWQSDAQT 256
+SAA G G PGP TPA + P S RP+ + G + G W A++
Sbjct: 91 VSAAAGALGVGRGPGPATPAPALPEVAVVVYGHAPASRGRPARRRSSGWWLGAW---AES 147
Query: 255 HLPWCHS 235
PW H+
Sbjct: 148 WAPWQHA 154
>UniRef50_A3BLQ9 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 240
Score = 32.3 bits (70), Expect = 5.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 411 PLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQP 298
P T +PP TP A+ P +PAT A + A + P+ P
Sbjct: 50 PTTTTPPAASTPPAAAPTTPATPAPAEAPTTPAPTKAP 87
>UniRef50_Q9VVA0 Cluster: CG9705-PA, isoform A; n=4; Diptera|Rep:
CG9705-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 143
Score = 32.3 bits (70), Expect = 5.4
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
V+G VK F+ G+GFI N EDVF H + I
Sbjct: 55 VTGMVKSFSRTKGHGFITPNAGGEDVFCHVSDI 87
>UniRef50_A7E8L8 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 614
Score = 32.3 bits (70), Expect = 5.4
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = -3
Query: 462 GNIGGGSHGRLSAA*GEPLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSA-QPYVGC 286
G+IGG + G+ S + P PP P P A+ P + T+ R QP
Sbjct: 429 GSIGGAATGQSSPSSLRPQAPQPPPPPHPLANASSPPNMSRRHTSADIRNVGGWQPTSSP 488
Query: 285 YGRWQSDAQ 259
Y QS +Q
Sbjct: 489 YASGQSSSQ 497
>UniRef50_A6RVG9 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1276
Score = 32.3 bits (70), Expect = 5.4
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 411 PLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQPYVGCYGRWQSDAQT 256
P +P T + +P +PA T +ST RRP PY+ R +S + +
Sbjct: 78 PPPQTPLNGATARSQRPTAPARTPSSTYAPARRPPQAPYMSISDRHRSGSNS 129
>UniRef50_Q7RUX3 Cluster: Pre-mRNA-splicing factor slt-11; n=13;
Pezizomycotina|Rep: Pre-mRNA-splicing factor slt-11 -
Neurospora crassa
Length = 392
Score = 32.3 bits (70), Expect = 5.4
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 465 EGN-IGGGSHGRLSAA*GEPLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQP 298
EGN + G S G A G P G+ G V P ++ A A + RRP+A P
Sbjct: 165 EGNPVNGSSSGAGRATGGNPAVGAGVGGVGPIRTRDSRAAAAAGARPGGGRRPNAAP 221
>UniRef50_UPI000050F90E Cluster: COG1278: Cold shock proteins; n=1;
Brevibacterium linens BL2|Rep: COG1278: Cold shock
proteins - Brevibacterium linens BL2
Length = 126
Score = 31.9 bits (69), Expect = 7.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+G VKWF+V G+GF+ D + F+H + +
Sbjct: 3 TGRVKWFDVDKGFGFVIAEDGSQ-AFLHSSVL 33
>UniRef50_Q5PBP1 Cluster: Cold shock protein; n=7;
Anaplasmataceae|Rep: Cold shock protein - Anaplasma
marginale (strain St. Maries)
Length = 92
Score = 31.9 bits (69), Expect = 7.2
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 13/48 (27%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFI---NRNDTK----------EDVFVHQTAIVRN 287
+G VKWF+V+ GYGFI +D K +DVFVH T++ R+
Sbjct: 13 TGHVKWFSVEKGYGFICKDGSDDGKSGGASFGRGDKDVFVHITSLQRS 60
>UniRef50_Q48AJ7 Cluster: Cold-shock DNA-binding domain family
protein; n=1; Colwellia psychrerythraea 34H|Rep:
Cold-shock DNA-binding domain family protein - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 201
Score = 31.9 bits (69), Expect = 7.2
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +3
Query: 192 VKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSV 314
++W N +GFI N + + +F+H+TA+ N + +
Sbjct: 8 IRW-NTDKAFGFITPNGSGDTIFIHKTALKNRNRTPKINDI 47
>UniRef50_Q84IJ3 Cluster: Cold shock protein; n=1; Janthinobacterium
sp. J3|Rep: Cold shock protein - Janthinobacterium sp.
J3
Length = 174
Score = 31.9 bits (69), Expect = 7.2
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSV 314
++ G V +N + G+GFI +N T E F+H +A+ + R + S+
Sbjct: 2 RLQGRVIEWNDERGFGFIIQNGTSERTFLHISALRKTKGRPLLGSL 47
>UniRef50_Q41I30 Cluster: ThiJ/PfpI; n=3; Bacillaceae|Rep: ThiJ/PfpI
- Exiguobacterium sibiricum 255-15
Length = 220
Score = 31.9 bits (69), Expect = 7.2
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = -2
Query: 385 SNTSCFKA-FLPGNHGKLHRLIMSPTERTALRGLL---RTMAV*CTNTSSLVSFLLMKPY 218
S+ S F A F+PG HG + L S ALR L +T+A C + LVS L
Sbjct: 84 SDFSAFDAIFMPGGHGTMFDLPHSDALNHALRTLFEAGKTVAAVCHGPAGLVSATLTDGT 143
Query: 217 PLL 209
PL+
Sbjct: 144 PLV 146
>UniRef50_A7BYF1 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
Beggiatoa sp. PS
Length = 189
Score = 31.9 bits (69), Expect = 7.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 180 VSGTVKWFNVKSGYGFINRNDTKEDVFVH 266
+ G V F+ K G+GFI + EDVFVH
Sbjct: 1 MEGIVVKFDKKRGFGFIRSDKFSEDVFVH 29
>UniRef50_A1SNP5 Cluster: Cold-shock protein, DNA-binding; n=26;
Actinobacteria (class)|Rep: Cold-shock protein,
DNA-binding - Nocardioides sp. (strain BAA-499 / JS614)
Length = 131
Score = 31.9 bits (69), Expect = 7.2
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
+G VKWF+ + G+GF+++ + DV+V A+
Sbjct: 3 TGKVKWFDAEKGFGFLSQ-ENGPDVYVRSEAL 33
>UniRef50_Q40315 Cluster: Putative surface protein; n=1; Medicago
sativa|Rep: Putative surface protein - Medicago sativa
(Alfalfa)
Length = 259
Score = 31.9 bits (69), Expect = 7.2
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 417 GEPLTGSPPGPVTPAA-SKPFSPATTANSTALSCRRPSAQPYV 292
G +P P TPA SKP +PA + S+A P+A P V
Sbjct: 169 GASAPATPATPATPATPSKPATPAAVSTSSAGDVATPAASPSV 211
>UniRef50_Q019N2 Cluster: Chromosome 05 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA
sequence - Ostreococcus tauri
Length = 73
Score = 31.9 bits (69), Expect = 7.2
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 177 KVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPR 296
+ SGTVKWFN D EDVFVHQ+A+ + R
Sbjct: 7 RASGTVKWFNF----------DGSEDVFVHQSALTMDGFR 36
>UniRef50_A0DVR0 Cluster: Chromosome undetermined scaffold_66, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_66,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 360
Score = 31.9 bits (69), Expect = 7.2
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNN-PRKAVRSVGDMIR 329
+G +K+F+ + YGFI + DVFVH + R ++ +R +G R
Sbjct: 267 TGKLKFFDEQKSYGFIVLDSDNSDVFVHLDDLQRAGITKEDLRKLGSCFR 316
>UniRef50_Q5KMV8 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 1029
Score = 31.9 bits (69), Expect = 7.2
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -3
Query: 450 GGSHGRLSAA*GEPLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQP 298
GG+ GRL + P TG+ P PA S P + S ++ R PS P
Sbjct: 642 GGNEGRLKFSGPTPGTGASESPALPAPSVQ-DPVPASKSKSIFTRAPSPPP 691
>UniRef50_A4RHX1 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 523
Score = 31.9 bits (69), Expect = 7.2
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Frame = -3
Query: 429 SAA*GEPLTGSPP---GPVTPAASKPFSPAT---TANSTALSCRRPSAQP 298
++A G P S P GP TP A+ P SPAT T+ S+ S R S QP
Sbjct: 445 TSASGAPAATSVPLAHGPTTPEATGPASPATAGGTSTSSTGSARPSSNQP 494
>UniRef50_A4QQA6 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 368
Score = 31.9 bits (69), Expect = 7.2
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -3
Query: 444 SHGRLSAA*GEPLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQP 298
S GR AA G PP V+ +S + +TTA +T+ S +P++ P
Sbjct: 262 STGRAVAALGSSNNVKPPALVSSESSSTTASSTTATATSTSVSKPTSTP 310
>UniRef50_UPI0000F31DEE Cluster: UPI0000F31DEE related cluster; n=1;
Bos taurus|Rep: UPI0000F31DEE UniRef100 entry - Bos
Taurus
Length = 462
Score = 31.5 bits (68), Expect = 9.5
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 432 LSAA*GEPLTGSPPGP-VTPAASKPFSPATTANST 331
+S A P PP P +TPAAS PF P T+ +T
Sbjct: 273 VSPAAPHPCPPPPPPPAITPAASPPFPPPTSTTAT 307
>UniRef50_Q4RP97 Cluster: Chromosome 1 SCAF15008, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 1 SCAF15008, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 586
Score = 31.5 bits (68), Expect = 9.5
Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = -3
Query: 453 GGGSHGRLSAA*GEPLTGSPPGPVTPAASK--PFSPATTANSTALSCRRPSAQPYVGCYG 280
GG +H RL+A P P GP A + P P A RP AQ G +G
Sbjct: 398 GGAAHLRLAAPQRRP--DDPGGPPDAGARRGGPDGPGLQTQPAA-GGERPGAQQG-GPHG 453
Query: 279 RWQSDAQTHLPWCHSC 232
SDA + P C SC
Sbjct: 454 AAGSDAPSSSPCCGSC 469
>UniRef50_A4FKV9 Cluster: Putative DNA-binding protein; n=1;
Saccharopolyspora erythraea NRRL 2338|Rep: Putative
DNA-binding protein - Saccharopolyspora erythraea
(strain NRRL 23338)
Length = 150
Score = 31.5 bits (68), Expect = 9.5
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGDMIRRWSLPWLPGRK 362
+GTV F+ GYGFI + EDVF+H A + + K V G + ++P G K
Sbjct: 3 TGTVVRFDGIKGYGFIAPDAGGEDVFLH--ASILDEELKEVLRGGMRVEFEAVPGNQGTK 60
Query: 363 A 365
A
Sbjct: 61 A 61
>UniRef50_A0UNB6 Cluster: Cold-shock DNA-binding domain protein;
n=1; Burkholderia multivorans ATCC 17616|Rep: Cold-shock
DNA-binding domain protein - Burkholderia multivorans
ATCC 17616
Length = 193
Score = 31.5 bits (68), Expect = 9.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIV 281
GTVKWF+ G+GFI ++ D F H + +V
Sbjct: 3 GTVKWFSKDKGHGFI-YGESAVDYFFHVSDVV 33
>UniRef50_A0H485 Cluster: FAD linked oxidase-like; n=2;
Chloroflexus|Rep: FAD linked oxidase-like - Chloroflexus
aggregans DSM 9485
Length = 395
Score = 31.5 bits (68), Expect = 9.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -3
Query: 348 TTANSTALSCRRPSAQPYVG---CYGRWQSDAQTHLP 247
TTA +T L +P+ + G CY RW + A +HLP
Sbjct: 303 TTAVNTTLQIAQPNLTIFPGLGLCYARWPAAAASHLP 339
>UniRef50_Q6Z0J6 Cluster: Putative permatin; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Putative permatin - Oryza
sativa subsp. japonica (Rice)
Length = 370
Score = 31.5 bits (68), Expect = 9.5
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -3
Query: 465 EGNIGGGSHGRLSAA*GEPLTGSPPGPVTPAAS--KPFSPATTANSTALSCRRPSAQPYV 292
E ++GGG+HGRL G +TG ++ + S P P+T ++ L+ RR V
Sbjct: 14 EYHVGGGAHGRLLRRRGRCVTGDCASVLSCSVSGEPPRCPSTRLHARLLTRRRRRLPRPV 73
Query: 291 GC 286
C
Sbjct: 74 AC 75
>UniRef50_Q9VK95 Cluster: CG6504-PA; n=3; Drosophila
melanogaster|Rep: CG6504-PA - Drosophila melanogaster
(Fruit fly)
Length = 924
Score = 31.5 bits (68), Expect = 9.5
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -3
Query: 417 GEPLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQP 298
G P S PG VTPA P PAT S + R + P
Sbjct: 33 GTPTADSTPGDVTPARGPPPPPATKRVSIGVGSTRSAPPP 72
>UniRef50_Q8IQ18 Cluster: CG33196-PB; n=10; Endopterygota|Rep:
CG33196-PB - Drosophila melanogaster (Fruit fly)
Length = 23015
Score = 31.5 bits (68), Expect = 9.5
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 6/66 (9%)
Frame = -3
Query: 411 PLTGSPPGPVTPAASKPFSP------ATTANSTALSCRRPSAQPYVGCYGRWQSDAQTHL 250
P PP PVT A P P A +N PYVGC R + T
Sbjct: 18275 PAPAPPPTPVTVVADDPCQPSPCGPNAQCSNGVCSCLPLYQGDPYVGC--RPECVLSTEC 18332
Query: 249 PWCHSC 232
PW +C
Sbjct: 18333 PWDKAC 18338
>UniRef50_Q61VC3 Cluster: Putative uncharacterized protein CBG04897;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG04897 - Caenorhabditis
briggsae
Length = 297
Score = 31.5 bits (68), Expect = 9.5
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 8/47 (17%)
Frame = -2
Query: 427 CSIR*AFDWLTTGTSNTSCF--------KAFLPGNHGKLHRLIMSPT 311
C I F+W TS T F PGNH L ++IMSPT
Sbjct: 208 CGIHDTFEWSDGSTSGTGGFVFGKNEPDDEIYPGNHACLQQIIMSPT 254
>UniRef50_Q248G5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 452
Score = 31.5 bits (68), Expect = 9.5
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 174 EKVSGTVKWFNVKSGYGFINRNDTKEDVFVH 266
EKV+G++K+F+ K +GF + D+FV+
Sbjct: 302 EKVTGSLKFFDEKKNFGFFVLDSDGSDIFVY 332
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,288,672
Number of Sequences: 1657284
Number of extensions: 8655620
Number of successful extensions: 45202
Number of sequences better than 10.0: 255
Number of HSP's better than 10.0 without gapping: 40512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44951
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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