Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1549
(467 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 98 1e-20
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 98 1e-20
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 98 1e-20
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 98 1e-20
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 98 1e-20
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 98 1e-20
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 98 1e-20
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 98 1e-20
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 98 1e-20
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 98 1e-20
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 98 1e-20
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 98 1e-20
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 98 1e-20
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 98 1e-20
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 98 1e-20
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 98 1e-20
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 98 1e-20
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 98 1e-20
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 97 2e-20
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 97 2e-20
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 97 2e-20
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 97 2e-20
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 97 2e-20
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 97 2e-20
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 97 2e-20
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 97 2e-20
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 97 2e-20
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 96 5e-20
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 96 5e-20
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 96 5e-20
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 96 5e-20
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 92 8e-19
AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-bo... 54 2e-07
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 36 0.092
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 36 0.092
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 36 0.092
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 36 0.092
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 36 0.092
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 36 0.092
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 36 0.092
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 36 0.092
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 36 0.092
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 34 0.21
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 34 0.21
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 34 0.21
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 34 0.21
AL359054-1|CAB94389.1| 259|Homo sapiens LDL induced endothelial... 33 0.49
BC033118-1|AAH33118.1| 221|Homo sapiens Unknown (protein for IM... 31 1.5
BC018638-1|AAH18638.2| 221|Homo sapiens Unknown (protein for IM... 31 1.5
AK128682-1|BAC87569.1| 303|Homo sapiens protein ( Homo sapiens ... 31 1.5
CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein. 31 2.6
BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein. 31 2.6
AY358370-1|AAQ88736.1| 258|Homo sapiens EGFL5 protein. 31 2.6
AL138836-3|CAC22313.2| 602|Homo sapiens multiple EGF-like-domai... 31 2.6
AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial acon... 31 2.6
AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIP... 31 2.6
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 30 3.5
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 30 3.5
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 30 3.5
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 30 3.5
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 30 3.5
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 30 3.5
Y11710-1|CAA72402.1| 755|Homo sapiens collagen type XIV protein. 29 6.1
X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein. 29 6.1
L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen ... 29 6.1
BX537768-1|CAD97831.1| 956|Homo sapiens hypothetical protein pr... 29 6.1
BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alph... 29 6.1
BC083495-1|AAH83495.1| 388|Homo sapiens COL14A1 protein protein. 29 6.1
BC014640-1|AAH14640.1| 759|Homo sapiens COL14A1 protein protein. 29 6.1
AB033075-1|BAA86563.1| 949|Homo sapiens KIAA1249 protein protein. 29 6.1
J00112-1|AAA52291.1| 60|Homo sapiens pro-alpha-1 collagen type... 29 8.0
D63484-1|BAA09771.1| 944|Homo sapiens KIAA0150 protein. 29 8.0
BC104943-1|AAI04944.1| 278|Homo sapiens FLJ39639 protein protein. 29 8.0
BC104941-1|AAI04942.1| 278|Homo sapiens FLJ39639 protein protein. 29 8.0
BC038670-1|AAH38670.1| 948|Homo sapiens zinc finger CCCH-type c... 29 8.0
AK096958-1|BAC04912.1| 252|Homo sapiens protein ( Homo sapiens ... 29 8.0
AF355797-1|AAK25826.1| 525|Homo sapiens BTBD2 protein protein. 29 8.0
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 104
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 106 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 141
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 102
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 104 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 139
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 145
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 147 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 182
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 105
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 107 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 105
Score = 56.0 bits (129), Expect = 6e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 107 ETVEFDVVEGEKGEEAANVTGPGGVPVQGSKYAADR 142
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 105
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 107 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 105
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 107 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 105
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 107 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 105
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 107 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 105
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 107 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 105
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 107 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 105
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 107 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 105
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 107 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 105
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 107 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 105
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 107 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 105
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 107 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 105
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 107 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 105
Score = 56.4 bits (130), Expect = 5e-08
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
+ VEF VV GEKG EAA VTGPGG PV+GS YAAD+
Sbjct: 107 ETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADR 142
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 97.5 bits (232), Expect = 2e-20
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 137
Score = 55.2 bits (127), Expect = 1e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 139 ETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 97.5 bits (232), Expect = 2e-20
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 137
Score = 55.2 bits (127), Expect = 1e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 139 ETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 97.5 bits (232), Expect = 2e-20
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 207
Score = 55.2 bits (127), Expect = 1e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 209 ETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 245
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 97.5 bits (232), Expect = 2e-20
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 137
Score = 55.2 bits (127), Expect = 1e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 139 ETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 97.5 bits (232), Expect = 2e-20
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 137
Score = 55.2 bits (127), Expect = 1e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 139 ETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 97.5 bits (232), Expect = 2e-20
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 137
Score = 55.2 bits (127), Expect = 1e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 139 ETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 97.5 bits (232), Expect = 2e-20
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 137
Score = 55.2 bits (127), Expect = 1e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 139 ETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 97.5 bits (232), Expect = 2e-20
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 137
Score = 55.2 bits (127), Expect = 1e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 139 ETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 97.5 bits (232), Expect = 2e-20
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGD
Sbjct: 19 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGD 70
Score = 55.2 bits (127), Expect = 1e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 72 ETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 108
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 96.3 bits (229), Expect = 5e-20
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGD
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGD 140
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EA VTGPGG PVKGS YA ++R
Sbjct: 142 ETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 178
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 96.3 bits (229), Expect = 5e-20
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGD
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGD 140
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EA VTGPGG PVKGS YA ++R
Sbjct: 142 ETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 178
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 96.3 bits (229), Expect = 5e-20
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RS+GD
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSLGD 137
Score = 55.2 bits (127), Expect = 1e-07
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EAA VTGP G PV+GS YAAD+R
Sbjct: 139 ETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRR 175
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 96.3 bits (229), Expect = 5e-20
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGD
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGD 140
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EA VTGPGG PVKGS YA ++R
Sbjct: 142 ETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 178
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 92.3 bits (219), Expect = 8e-19
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = +3
Query: 165 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIVRNNPRKAVRSVGD 320
VIA KV GTVKWFNV++GYGFI+RNDTKEDVFVH TA +NNPRK +RSVGD
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKEDVFVHHTAXKKNNPRKYLRSVGD 101
Score = 54.4 bits (125), Expect = 2e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2
Query: 332 VEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 433
VEF VV GEKG +AA VTGPGG PV+GS YAAD+
Sbjct: 105 VEFDVVEGEKGAKAANVTGPGGVPVQGSKYAADR 138
>AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-box
binding protein variant protein.
Length = 268
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +2
Query: 326 KAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 436
+ VEF VV GEKG EA VTGPGG PVKGS YA ++R
Sbjct: 46 ETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 82
Score = 36.3 bits (80), Expect = 0.053
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 255 VFVHQTAIVRNNPRKAVRSVGD 320
+F +QTAI RNNPRK +RSVGD
Sbjct: 23 LFPNQTAIKRNNPRKFLRSVGD 44
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 35.5 bits (78), Expect = 0.092
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 278
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 69
Score = 33.9 bits (74), Expect = 0.28
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 317 RHDKAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 415
+ + VEF KG E+ VTGPGG P GS
Sbjct: 78 KEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 35.5 bits (78), Expect = 0.092
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 278
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 69
Score = 33.9 bits (74), Expect = 0.28
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 317 RHDKAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 415
+ + VEF KG E+ VTGPGG P GS
Sbjct: 78 KEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.092
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 278
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 46
Score = 33.9 bits (74), Expect = 0.28
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 317 RHDKAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 415
+ + VEF KG E+ VTGPGG P GS
Sbjct: 55 KEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.092
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 278
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 46
Score = 33.9 bits (74), Expect = 0.28
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 317 RHDKAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 415
+ + VEF KG E+ VTGPGG P GS
Sbjct: 55 KEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.092
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 278
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 46
Score = 33.9 bits (74), Expect = 0.28
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 317 RHDKAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 415
+ + VEF KG E+ VTGPGG P GS
Sbjct: 55 KEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.092
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 278
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 46
Score = 33.9 bits (74), Expect = 0.28
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 317 RHDKAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 415
+ + VEF KG E+ VTGPGG P GS
Sbjct: 55 KEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.092
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 278
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 46
Score = 33.9 bits (74), Expect = 0.28
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 317 RHDKAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 415
+ + VEF KG E+ VTGPGG P GS
Sbjct: 55 KEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 87
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 35.5 bits (78), Expect = 0.092
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 278
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 69
Score = 33.9 bits (74), Expect = 0.28
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 317 RHDKAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 415
+ + VEF KG E+ VTGPGG P GS
Sbjct: 78 KEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 35.5 bits (78), Expect = 0.092
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGF---INRN----DTKEDVFVHQTAI 278
+G KWFNV+ G+GF INR D DVFVHQ+ +
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKL 69
Score = 33.9 bits (74), Expect = 0.28
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 317 RHDKAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 415
+ + VEF KG E+ VTGPGG P GS
Sbjct: 78 KEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 34.3 bits (75), Expect = 0.21
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAI 278
+G KWFNV+ G+GF++ D DVFVHQ+ +
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL 79
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 317 RHDKAVEFAVVAGEKGFEAAGVTGPGG 397
+ +AVEF KG E+ VTGPGG
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGG 114
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 34.3 bits (75), Expect = 0.21
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAI 278
+G KWFNV+ G+GF++ D DVFVHQ+ +
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL 79
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 317 RHDKAVEFAVVAGEKGFEAAGVTGPGG 397
+ +AVEF KG E+ VTGPGG
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGG 114
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 34.3 bits (75), Expect = 0.21
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAI 278
+G KWFNV+ G+GF++ D DVFVHQ+ +
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL 79
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 317 RHDKAVEFAVVAGEKGFEAAGVTGPGG 397
+ +AVEF KG E+ VTGPGG
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGG 114
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 34.3 bits (75), Expect = 0.21
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 7/39 (17%)
Frame = +3
Query: 183 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAI 278
+G KWFNV+ G+GF++ D DVFVHQ+ +
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL 79
Score = 29.9 bits (64), Expect = 4.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 317 RHDKAVEFAVVAGEKGFEAAGVTGPGG 397
+ +AVEF KG E+ VTGPGG
Sbjct: 88 KEGEAVEFTFKKSAKGLESIRVTGPGG 114
>AL359054-1|CAB94389.1| 259|Homo sapiens LDL induced endothelial
cell protein protein.
Length = 259
Score = 33.1 bits (72), Expect = 0.49
Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 453 GGGSHGRLSAA*GEPL-TGSPPGPVTPAASKPFSPATTANS 334
GGG+ S A G L G+PP P TPA P SPA A S
Sbjct: 9 GGGTSALGSRASGRRLFPGTPPTPRTPAPPVPASPAPPARS 49
>BC033118-1|AAH33118.1| 221|Homo sapiens Unknown (protein for
IMAGE:3658774) protein.
Length = 221
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = -3
Query: 462 GNIGGGSHGRLSAA*GEPLTGSPPGPVTPAASKPFSPATTANSTAL-SCRRPSAQPYVGC 286
G++GGG R GE L P P+AS + A+ L S R P Y G
Sbjct: 40 GHVGGGGDARGPRLEGESLPHPRLAPAAPSASPALAHPLVAHPARLDSSRNPGTGIYFGG 99
Query: 285 YGRWQ 271
W+
Sbjct: 100 SAAWR 104
>BC018638-1|AAH18638.2| 221|Homo sapiens Unknown (protein for
IMAGE:3632616) protein.
Length = 221
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = -3
Query: 462 GNIGGGSHGRLSAA*GEPLTGSPPGPVTPAASKPFSPATTANSTAL-SCRRPSAQPYVGC 286
G++GGG R GE L P P+AS + A+ L S R P Y G
Sbjct: 40 GHVGGGGDARGPRLEGESLPHPRLAPAAPSASPALAHPLVAHPARLDSSRNPGTGIYFGG 99
Query: 285 YGRWQ 271
W+
Sbjct: 100 SAAWR 104
>AK128682-1|BAC87569.1| 303|Homo sapiens protein ( Homo sapiens
cDNA FLJ46848 fis, clone UTERU3005422. ).
Length = 303
Score = 31.5 bits (68), Expect = 1.5
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = -3
Query: 402 GSPPGPVTPAASKPFSPATTANSTALSCRRPSAQP--YVGCYGRWQSDAQTHLPW 244
G PP P TP A+ P + + + P+AQP G YG+W S A W
Sbjct: 158 GVPPPPATPGAAPLAFPPPPSQAAPGMSKPPTAQPDFPYGQYGKW-SPAMPRPRW 211
>CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein.
Length = 153
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein.
Length = 153
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AY358370-1|AAQ88736.1| 258|Homo sapiens EGFL5 protein.
Length = 258
Score = 30.7 bits (66), Expect = 2.6
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 462 GNI--GGGSHGRLSAA*GEPLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSA 304
GN+ GGG+ G++ A+ G L G P P P A+ P + A + RP A
Sbjct: 29 GNVTGGGGAAGQVDASPGPGLRGEPSHPF-PRATAPTAQAPRTGPPRATVHRPLA 82
>AL138836-3|CAC22313.2| 602|Homo sapiens multiple EGF-like-domains
9 protein.
Length = 602
Score = 30.7 bits (66), Expect = 2.6
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 462 GNI--GGGSHGRLSAA*GEPLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSA 304
GN+ GGG+ G++ A+ G L G P P P A+ P + A + RP A
Sbjct: 39 GNVTGGGGAAGQVDASPGPGLRGEPSHPF-PRATAPTAQAPRTGPPRATVHRPLA 92
>AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial
aconitase 2, the gene Statin S).).
Length = 153
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIPPin
protein.
Length = 153
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 186 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 278
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 353 GEKGFEAAGVTGPGGEPVKGSPYAADKRPWLPPPIFP 463
GE+GF G+ GP GEP K P A P P+ P
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERGPPGPMGP 1002
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 353 GEKGFEAAGVTGPGGEPVKGSPYAADKRPWLPPPIFP 463
GE+GF G+ GP GEP K P A P P+ P
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERGPPGPMGP 1002
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 353 GEKGFEAAGVTGPGGEPVKGSPYAADKRPWLPPPIFP 463
GE+GF G+ GP GEP K P A P P+ P
Sbjct: 544 GERGFP--GLPGPSGEPGKQGPSGASGERGPPGPMGP 578
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 353 GEKGFEAAGVTGPGGEPVKGSPYAADKRPWLPPPIFP 463
GE+GF G+ GP GEP K P A P P+ P
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERGPPGPMGP 1002
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 353 GEKGFEAAGVTGPGGEPVKGSPYAADKRPWLPPPIFP 463
GE+GF G+ GP GEP K P A P P+ P
Sbjct: 965 GERGFP--GLPGPSGEPGKQGPSGASGERGPPGPMGP 999
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 353 GEKGFEAAGVTGPGGEPVKGSPYAADKRPWLPPPIFP 463
GE+GF G+ GP GEP K P A P P+ P
Sbjct: 971 GERGFP--GLPGPSGEPGKQGPSGASGERGPPGPMGP 1005
>Y11710-1|CAA72402.1| 755|Homo sapiens collagen type XIV protein.
Length = 755
Score = 29.5 bits (63), Expect = 6.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 347 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRPWLPPP 454
+ GEKG G GP G P P + + RP P P
Sbjct: 672 IKGEKGNPGVGTQGPRGPPGPAGP-SGESRPGSPGP 706
>X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein.
Length = 1160
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 353 GEKGFEAAGVTGPGGEPVK-GSPYAA-DKRPWLPPPIFP 463
GE+GF G+ GP GEP K G+P A+ D+ P P P+ P
Sbjct: 921 GERGFP--GLPGPSGEPGKQGAPGASGDRGP--PGPVGP 955
>L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen
protein.
Length = 1487
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 353 GEKGFEAAGVTGPGGEPVK-GSPYAA-DKRPWLPPPIFP 463
GE+GF G+ GP GEP K G+P A+ D+ P P P+ P
Sbjct: 990 GERGFP--GLPGPSGEPGKQGAPGASGDRGP--PGPVGP 1024
>BX537768-1|CAD97831.1| 956|Homo sapiens hypothetical protein
protein.
Length = 956
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = -3
Query: 411 PLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQPYVGCYGRWQSDAQTHLP 247
P + GP P ++ P S T++ S+ LS +RP P + R SD + LP
Sbjct: 621 PPRNAGKGPTGPPSTLPLSTQTSSGSSTLSKKRPPPPP--PGHKRTLSDPPSPLP 673
>BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alpha 1
(primary osteoarthritis, spondyloepiphyseal dysplasi
protein.
Length = 1487
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 353 GEKGFEAAGVTGPGGEPVK-GSPYAA-DKRPWLPPPIFP 463
GE+GF G+ GP GEP K G+P A+ D+ P P P+ P
Sbjct: 990 GERGFP--GLPGPSGEPGKQGAPGASGDRGP--PGPVGP 1024
>BC083495-1|AAH83495.1| 388|Homo sapiens COL14A1 protein protein.
Length = 388
Score = 29.5 bits (63), Expect = 6.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 347 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRPWLPPP 454
+ GEKG G GP G P P + + RP P P
Sbjct: 289 IKGEKGNPGVGTQGPRGPPGPAGP-SGESRPGSPGP 323
>BC014640-1|AAH14640.1| 759|Homo sapiens COL14A1 protein protein.
Length = 759
Score = 29.5 bits (63), Expect = 6.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 347 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRPWLPPP 454
+ GEKG G GP G P P + + RP P P
Sbjct: 660 IKGEKGNPGVGTQGPRGPPGPAGP-SGESRPGSPGP 694
>AB033075-1|BAA86563.1| 949|Homo sapiens KIAA1249 protein protein.
Length = 949
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = -3
Query: 411 PLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQPYVGCYGRWQSDAQTHLP 247
P + GP P ++ P S T++ S+ LS +RP P + R SD + LP
Sbjct: 614 PPRNAGKGPTGPPSTLPLSTQTSSGSSTLSKKRPPPPP--PGHKRTLSDPPSPLP 666
>J00112-1|AAA52291.1| 60|Homo sapiens pro-alpha-1 collagen type 1
protein.
Length = 60
Score = 29.1 bits (62), Expect = 8.0
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 353 GEKGFEAAGVTGPGGEPVKGSPYAADKRPWLPPPIFP 463
GE+GF G GP GEP K P A P P+ P
Sbjct: 4 GERGFP--GPLGPSGEPGKQGPSGASGERGPPGPMGP 38
>D63484-1|BAA09771.1| 944|Homo sapiens KIAA0150 protein.
Length = 944
Score = 29.1 bits (62), Expect = 8.0
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 408 LTGSPPGPVTPAASKPFSPATTANSTALSCR--RPSAQPYVGCYG 280
L G+ P P TPAAS + P T + A S R RPS + Y +G
Sbjct: 20 LHGNAPAPGTPAAS-GWQPPTYHSGRAFSARYPRPSRRGYSSHHG 63
>BC104943-1|AAI04944.1| 278|Homo sapiens FLJ39639 protein protein.
Length = 278
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 411 PLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQP 298
P SPPGP+ P P + A T S R+P P
Sbjct: 112 PAQPSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGP 149
>BC104941-1|AAI04942.1| 278|Homo sapiens FLJ39639 protein protein.
Length = 278
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 411 PLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQP 298
P SPPGP+ P P + A T S R+P P
Sbjct: 112 PAQPSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGP 149
>BC038670-1|AAH38670.1| 948|Homo sapiens zinc finger CCCH-type
containing 3 protein.
Length = 948
Score = 29.1 bits (62), Expect = 8.0
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 408 LTGSPPGPVTPAASKPFSPATTANSTALSCR--RPSAQPYVGCYG 280
L G+ P P TPAAS + P T + A S R RPS + Y +G
Sbjct: 24 LHGNAPAPGTPAAS-GWQPPTYHSGRAFSARYPRPSRRGYSSHHG 67
>AK096958-1|BAC04912.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ39639 fis, clone SMINT2003340. ).
Length = 252
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 411 PLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSAQP 298
P SPPGP+ P P + A T S R+P P
Sbjct: 86 PAQPSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGP 123
>AF355797-1|AAK25826.1| 525|Homo sapiens BTBD2 protein protein.
Length = 525
Score = 29.1 bits (62), Expect = 8.0
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -3
Query: 450 GGSHGRLSAA*G---EPLTGSPPGPVTPAASKPFSPATTANSTALSCRRPSA 304
GGS GR S G P TG PGP AA+ P +P A + A + +A
Sbjct: 4 GGSGGRASCPPGVGVGPGTGGSPGPSANAAATP-APGNAAAAAAAAAAAAAA 54
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,938,999
Number of Sequences: 237096
Number of extensions: 1385929
Number of successful extensions: 7908
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 6691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7870
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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