Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1546
(369 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 22 1.7
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 21 5.3
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 21 5.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 5.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 5.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 5.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 5.3
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 21 5.3
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 20 9.2
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 20 9.2
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 20 9.2
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 22.2 bits (45), Expect = 1.7
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 31 YRFDTKSRYNYENWKYIQY*LTRQTS*CL 117
+ DT+S ++ +N+KY++ +T CL
Sbjct: 7 FTIDTRSTHSMKNFKYLKVLVTFAHFICL 35
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 20.6 bits (41), Expect = 5.3
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 66 KLEIYTILADPTDFVVPQSII 128
K ++Y L + F++P SII
Sbjct: 181 KWQVYMTLVSLSLFIIPASII 201
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 20.6 bits (41), Expect = 5.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 300 LVLNDLWKSREGLKGRKI*KC 238
L L+D REGLKG + +C
Sbjct: 27 LRLHDNPSLREGLKGARTFRC 47
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 5.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 178 IPSVCFKFILYKSLGLLIID*GT 110
IPS+ ILY + L ++ GT
Sbjct: 1039 IPSMYLLLILYSIINLNVVSWGT 1061
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 5.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 178 IPSVCFKFILYKSLGLLIID*GT 110
IPS+ ILY + L ++ GT
Sbjct: 1039 IPSMYLLLILYSIINLNVVSWGT 1061
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 20.6 bits (41), Expect = 5.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 178 IPSVCFKFILYKSLGLLIID*GT 110
IPS+ ILY + L ++ GT
Sbjct: 1039 IPSMYLLLILYSIINLNVVSWGT 1061
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 20.6 bits (41), Expect = 5.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 178 IPSVCFKFILYKSLGLLIID*GT 110
IPS+ ILY + L ++ GT
Sbjct: 1039 IPSMYLLLILYSIINLNVVSWGT 1061
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 20.6 bits (41), Expect = 5.3
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -2
Query: 164 F*VYFIQKFRSFNYRLRHYEVCRV 93
F ++ I F +FN H ++C++
Sbjct: 415 FNIFLITPFYNFNENTIHSKLCKL 438
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 19.8 bits (39), Expect = 9.2
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 255 YLLNLLWTSTNHSRPKLAKSVRGRSRGGPVPNSPY 359
Y L L T +H R K + SV G SP+
Sbjct: 65 YCLFLEMTLAHHCRFKFSSSVGWSPAGHEEAQSPH 99
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 19.8 bits (39), Expect = 9.2
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +3
Query: 138 KLLYKINLKQTEGILL 185
KLLY+I + +T+ +L+
Sbjct: 312 KLLYRIPVTKTDSMLI 327
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 19.8 bits (39), Expect = 9.2
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +3
Query: 138 KLLYKINLKQTEGILL 185
KLLY+I + +T+ +L+
Sbjct: 137 KLLYRIPVTKTDSMLI 152
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,181
Number of Sequences: 336
Number of extensions: 1850
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 7616520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -