Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1546
         (369 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1754|AAF54984.1| 1481|Drosophila melanogaster CG14365-P...    28   3.3  
BT024310-1|ABC86372.1|  530|Drosophila melanogaster IP11827p pro...    27   5.8  
AE014297-3797|AAF56465.1|  502|Drosophila melanogaster CG11913-P...    27   5.8  

>AE014297-1754|AAF54984.1| 1481|Drosophila melanogaster CG14365-PA
           protein.
          Length = 1481

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 263 KPSLDFHKSFKTKISQIGPRPLEGGPGTQFAL 358
           KP L  H++ KT+I Q+ P+ LE  P  +  L
Sbjct: 429 KPILKVHEASKTRIIQVQPKHLEERPKLRLQL 460


>BT024310-1|ABC86372.1|  530|Drosophila melanogaster IP11827p
           protein.
          Length = 530

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 19/71 (26%), Positives = 26/71 (36%)
 Frame = -1

Query: 366 THYRANWVPGPPSSGRGPIWLILVLNDLWKSREGLKGRKI*KCSELNKNYNFVFPLMCPP 187
           THY   W P P    +    +     D WK R   KG++I       +     F    P 
Sbjct: 101 THY---WYPDPEFMNKQQYIVWYPEGDEWKKRPNFKGKQIPPVDRTFRTKLINFGPAHPA 157

Query: 186 SEGFLLFVLSL 154
           + G L  +L L
Sbjct: 158 AHGVLRMILEL 168


>AE014297-3797|AAF56465.1|  502|Drosophila melanogaster CG11913-PA
           protein.
          Length = 502

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 19/71 (26%), Positives = 26/71 (36%)
 Frame = -1

Query: 366 THYRANWVPGPPSSGRGPIWLILVLNDLWKSREGLKGRKI*KCSELNKNYNFVFPLMCPP 187
           THY   W P P    +    +     D WK R   KG++I       +     F    P 
Sbjct: 73  THY---WYPDPEFMNKQQYIVWYPEGDEWKKRPNFKGKQIPPVDRTFRTKLINFGPAHPA 129

Query: 186 SEGFLLFVLSL 154
           + G L  +L L
Sbjct: 130 AHGVLRMILEL 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,131,290
Number of Sequences: 53049
Number of extensions: 320265
Number of successful extensions: 641
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)