Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1545
         (473 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   0.62 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   1.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   1.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   5.8  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   5.8  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.7  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 0.62
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -3

Query: 402 IDGLSTEHNST-PSFSVNKMGSPGMLVSLVSGDHKLHFVSKISNKWMESIV 253
           ID +  E+ +T P ++ N++  PG+ VS +    +    +  +  W +S V
Sbjct: 406 IDDIFQEYKATLPRYTENQLNYPGITVSNIEVQSQGSSKNTFNTFWQQSDV 456


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 371 PLRFL*TKWVLRECLCH*FQVTTNSILLVKLVTS 270
           P   L   W++   +   +QVTTN  L++KL+TS
Sbjct: 300 PFILLQVAWIVLHLIRLMYQVTTN--LVLKLLTS 331


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 225 GGNLPSVCFVSKYFQQRLGHFQGAEHSHVF 136
           G N P    V+ +   R  HF GA++S VF
Sbjct: 239 GDNKPDTILVNGF--GRFKHFVGADNSTVF 266


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 373 HPFVFCKQNGFSGNAC 326
           HP V     G+SG+ C
Sbjct: 119 HPQVLLSPGGYSGSLC 134


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 267 MESIVYKS*CAKHHGGNLPSVCFVSKY 187
           ++ + Y   C K      PSV F+S+Y
Sbjct: 41  LQELKYTKRCIKETLRLFPSVPFISRY 67


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 394 SVDGAQQHPFVFCKQNG 344
           +VDG Q+HP      NG
Sbjct: 146 NVDGCQKHPLCNDDPNG 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,340
Number of Sequences: 336
Number of extensions: 2234
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)