Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1545
         (473 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF268032-1|AAK58588.1|  685|Homo sapiens rhophilin-like protein ...    29   6.2  
BC103897-1|AAI03898.1|  225|Homo sapiens CHST13 protein protein.       29   8.2  
BC103896-1|AAI03897.1|  225|Homo sapiens CHST13 protein protein.       29   8.2  

>AF268032-1|AAK58588.1|  685|Homo sapiens rhophilin-like protein
           protein.
          Length = 685

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = -3

Query: 453 KVY*SLGCQNSRLSILTI-DGLSTEHNSTPSFSVNKMGSPGMLVSLVSGDHKLHFVSKIS 277
           K+  S G     + ++++ D  S+ HN + ++SV    +  M+   +  D+K     KIS
Sbjct: 575 KLLKSFGRDEIEMKVVSLLDSTSSMHNKSATYSVGMQKTYSMICLAIDDDNKTDKTKKIS 634

Query: 276 NK 271
            K
Sbjct: 635 KK 636


>BC103897-1|AAI03898.1|  225|Homo sapiens CHST13 protein protein.
          Length = 225

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 85  LSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRNK-ADTRQIAAVVFSTLAFIHNR 261
           L SL  +   +I   L  Y+A L   E  + L   +RNK A TR    V  +T ++  +R
Sbjct: 149 LPSLADFSPAEINRRLRAYLAFLFVREPFERLASAYRNKLARTRSATRVASATTSWASSR 208


>BC103896-1|AAI03897.1|  225|Homo sapiens CHST13 protein protein.
          Length = 225

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 85  LSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRNK-ADTRQIAAVVFSTLAFIHNR 261
           L SL  +   +I   L  Y+A L   E  + L   +RNK A TR    V  +T ++  +R
Sbjct: 149 LPSLADFSPAEINRRLRAYLAFLFVREPFERLASAYRNKLARTRSATRVASATTSWASSR 208


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,018,851
Number of Sequences: 237096
Number of extensions: 1370114
Number of successful extensions: 6618
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6614
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)