Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1542
         (653 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IBJ2 Cluster: Putative uncharacterized protein MAL7P1...    37   0.49 
UniRef50_Q94299 Cluster: Serpentine receptor, class x protein 36...    36   0.64 
UniRef50_Q2AB74 Cluster: Bitter taste receptor; n=1; Xenopus tro...    35   1.5  
UniRef50_A2F0Z3 Cluster: Putative uncharacterized protein; n=1; ...    35   2.0  
UniRef50_Q23PS4 Cluster: Putative uncharacterized protein; n=5; ...    34   2.6  
UniRef50_A0X3P0 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  
UniRef50_Q7MBA7 Cluster: Similarities with unknown protein. Puta...    33   7.9  
UniRef50_Q98S55 Cluster: Putative uncharacterized protein orf161...    33   7.9  

>UniRef50_Q8IBJ2 Cluster: Putative uncharacterized protein MAL7P1.146;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            MAL7P1.146 - Plasmodium falciparum (isolate 3D7)
          Length = 4894

 Score = 36.7 bits (81), Expect = 0.49
 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
 Frame = -3

Query: 333  KNMKFNITTKITNYDKFYVSEFKLHIMNL*NFIFCVTITYFVIVKALKCLRFVKNSVNVV 154
            KN+  N   KITNY K       LHI+N    I+C+    ++I   +K  +  KN     
Sbjct: 2235 KNIIENDLNKITNYKKILQLLKLLHIINRDQLIYCIIYLIYIIQIYIKNKK--KNK---- 2288

Query: 153  SALFLFNQHKSKISK-KSDENTSCMSVIISYAFIFLLYTLYALNVYFNKEY 4
                  N+ K+KI+K K  +    ++  +S+ ++ LL  LY+    F   Y
Sbjct: 2289 ------NKEKNKITKEKEKKKNETLTSHLSF-YLILLIILYSKEEKFKNSY 2332


>UniRef50_Q94299 Cluster: Serpentine receptor, class x protein 36;
           n=1; Caenorhabditis elegans|Rep: Serpentine receptor,
           class x protein 36 - Caenorhabditis elegans
          Length = 300

 Score = 36.3 bits (80), Expect = 0.64
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = -3

Query: 168 SVNVVSALFLFNQHKSKISKKSDENTSCMSVIISYAFIFLLYTLYALNVYFNKE 7
           ++N   A+FL   +K+ +S    +     S I+S AF+ +L+ +Y   +Y+NKE
Sbjct: 98  TINRFCAVFLPIAYKTLLSSTRTKVIIAFSFILSLAFLTILFQIYPCQMYYNKE 151


>UniRef50_Q2AB74 Cluster: Bitter taste receptor; n=1; Xenopus
           tropicalis|Rep: Bitter taste receptor - Xenopus
           tropicalis (Western clawed frog) (Silurana tropicalis)
          Length = 300

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = +1

Query: 280 IKFIIISYFCGYIKFHIFFSFNSKWILGWL*QLS*YYVIVII-MLPLLEFLKSFI-SLQA 453
           I F     +C +  F +   + S+W+  WL  L  Y+V++ I   P +  L+S I S+  
Sbjct: 68  IPFSAFGIYCIFYVFELSLDYFSRWVAMWLSVL--YFVMITISKQPFMLSLRSKIPSITR 125

Query: 454 S*IWQSMFYNYYYKLT 501
           S +W S+  +++  LT
Sbjct: 126 SMLWVSILLSFFPALT 141


>UniRef50_A2F0Z3 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 967

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 24/63 (38%), Positives = 32/63 (50%)
 Frame = -3

Query: 207 IVKALKCLRFVKNSVNVVSALFLFNQHKSKISKKSDENTSCMSVIISYAFIFLLYTLYAL 28
           I+K+LK L F K    V S  FL +  KSK+ +   ENTS +   I  AF       YA+
Sbjct: 137 ILKSLKLLLFTKFCNEVESCQFLTSGTKSKLRELCIENTSLIHPCILSAFREPQILPYAI 196

Query: 27  NVY 19
           N +
Sbjct: 197 NAF 199


>UniRef50_Q23PS4 Cluster: Putative uncharacterized protein; n=5;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1609

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = -3

Query: 303 ITNYDKFYVSEFKLHIMNL*NFIFCVTITYFVIV-KALKCLR-FVKNSVNVVSALFLFNQ 130
           + NY+ FY++    +   L NFI    I    I  + +KCL+ FV  S+  + + F  NQ
Sbjct: 155 VQNYETFYITILNKNYFKLYNFINPNQIDPSAIYDQQIKCLKPFVYQSIGCLPSNFNCNQ 214

Query: 129 HKSK 118
           H SK
Sbjct: 215 HDSK 218


>UniRef50_A0X3P0 Cluster: Putative uncharacterized protein; n=1;
           Shewanella pealeana ATCC 700345|Rep: Putative
           uncharacterized protein - Shewanella pealeana ATCC
           700345
          Length = 241

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 24/80 (30%), Positives = 42/80 (52%)
 Frame = +1

Query: 214 IRNSNTENKILQIHYMKFEFGNIKFIIISYFCGYIKFHIFFSFNSKWILGWL*QLS*YYV 393
           +RN   +N++ ++  M  + G +KF +++     I F I FSF S ++ GW+        
Sbjct: 11  VRNKEIDNRLGELCNMLSKVGTVKFYMLA-----IIFCIVFSFVSYFVSGWVIDTD---- 61

Query: 394 IVIIMLPLLEFLKSFISLQA 453
           I+     + E LKS IS+Q+
Sbjct: 62  ILYAYNEMDEELKSIISIQS 81


>UniRef50_Q7MBA7 Cluster: Similarities with unknown protein.
           Putative transmembrane protein; n=1; Photorhabdus
           luminescens subsp. laumondii|Rep: Similarities with
           unknown protein. Putative transmembrane protein -
           Photorhabdus luminescens subsp. laumondii
          Length = 179

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
 Frame = -3

Query: 273 EFKLHIMNL*NFIFCVTITYFVIVKALKCLRFVKN---SVNVVSALFLFNQHKSKISK-- 109
           E+KL I+ L +F+      +F   K LK L  + +   S+N+ ++ F FN+H+   S   
Sbjct: 37  EYKLKIILL-SFLLANVNAFFYCYKYLKPLVLLISILWSLNISTSFFFFNEHQINFSSTI 95

Query: 108 -KSDENTSCMSVI--ISYAFIFLLYTLYALNVYF 16
             +  NT+    +  +SY   ++ + ++ L +YF
Sbjct: 96  ANTFINTNSNEAVGMLSYNKYYVFFFIFMLLIYF 129


>UniRef50_Q98S55 Cluster: Putative uncharacterized protein orf1613;
           n=1; Guillardia theta|Rep: Putative uncharacterized
           protein orf1613 - Guillardia theta (Cryptomonas phi)
          Length = 1613

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
 Frame = -3

Query: 333 KNMKFNITTKITNYD-KFYVSEFKLHIMNL*N----FIFCVTITYFVIVKALKCLRFVKN 169
           KN+ FNI  KI  +D KFY+++ K +  ++       IF + +    I K LK L+F   
Sbjct: 335 KNLLFNIFIKIAGFDLKFYLTDIKYYRNSISYSSHITIFLLDLRSLNIKKMLKFLQFCDK 394

Query: 168 SVN--VVSALFLFNQHKSKISKKSD--ENTSCMSVIISYAFIFLLYTLYALN 25
           +++  V+S        K   SKK +   N      II + +I    ++Y +N
Sbjct: 395 NLHFRVLSKYLCCRIQKFINSKKKELLNNKFKAKSIIVWNYINTFTSIYIIN 446


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,858,260
Number of Sequences: 1657284
Number of extensions: 10318462
Number of successful extensions: 23021
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22991
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)