Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1541
(490 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 122 4e-29
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 120 2e-28
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 70 2e-13
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 69 3e-13
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.16
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.38
SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|c... 28 0.87
SPAC11E3.11c |||guanyl-nucleotide exchange factor |Schizosacchar... 27 1.1
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 1.1
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 1.5
SPBC215.02 |bob1|gim5, gim5|prefoldin subunit 5 |Schizosaccharom... 27 2.0
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 26 3.5
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 25 4.6
SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|... 25 4.6
SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces pomb... 25 4.6
SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2 |Schizos... 25 6.1
SPBC3H7.15 |hhp1||serine/threonine protein kinase Hhp1|Schizosac... 25 8.1
SPAC959.06c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.1
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 25 8.1
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 25 8.1
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 122 bits (293), Expect = 4e-29
Identities = 57/103 (55%), Positives = 71/103 (68%)
Frame = +3
Query: 180 QTRPSGVETILSTLSSARPELASTYPVLSSSILNLLLFDEVRTGTYRQMFHPEQLITGKE 359
Q G T S + S Y L +++ D+VRTG YR +FHPEQLITGKE
Sbjct: 43 QNSDGGFSTFFSETGQGKYVPRSIYVDLEPNVI-----DQVRTGPYRDLFHPEQLITGKE 97
Query: 360 DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHS 488
DA+NNYARGHYT+GKE+VD V D+IR++AD C+GLQGFL+FHS
Sbjct: 98 DASNNYARGHYTVGKELVDEVTDKIRRIADNCSGLQGFLVFHS 140
Score = 120 bits (289), Expect = 1e-28
Identities = 51/75 (68%), Positives = 60/75 (80%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAG QIGNACWELYCLEHGIQP+G M + D F+TFFSETG GK
Sbjct: 1 MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGK 60
Query: 248 HVPRAVFVDLEPTVV 292
+VPR+++VDLEP V+
Sbjct: 61 YVPRSIYVDLEPNVI 75
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 120 bits (288), Expect = 2e-28
Identities = 47/67 (70%), Positives = 62/67 (92%)
Frame = +3
Query: 288 LFDEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 467
+ D+VRTG Y+ +FHPEQ++TGKEDA+NNYARGHYT+GKE++D VL+RIR++AD C+GLQ
Sbjct: 78 VIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMIDSVLERIRRMADNCSGLQ 137
Query: 468 GFLIFHS 488
GFL+FHS
Sbjct: 138 GFLVFHS 144
Score = 113 bits (271), Expect = 2e-26
Identities = 55/80 (68%), Positives = 61/80 (76%), Gaps = 5/80 (6%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD-----KTIGGGDDSFNTFFSE 232
MRE ISVHVGQAGVQIGNACWELYCLEHGI PDG PT+ K +D F TFFSE
Sbjct: 1 MREVISVHVGQAGVQIGNACWELYCLEHGIGPDG-FPTENSEVHKNNSYLNDGFGTFFSE 59
Query: 233 TGAGKHVPRAVFVDLEPTVV 292
TG GK VPR+++VDLEP V+
Sbjct: 60 TGQGKFVPRSIYVDLEPNVI 79
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 70.1 bits (164), Expect = 2e-13
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
RE I++ GQ G QIG+ W+ CLEHGI PDG + + T G D + FF ++ ++
Sbjct: 3 REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFAT--EGVDRKDVFFYQSDDTRY 60
Query: 251 VPRAVFVDLEPTVV 292
+PRA+ +DLEP VV
Sbjct: 61 IPRAILIDLEPRVV 74
Score = 41.5 bits (93), Expect = 7e-05
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 467
+ + + TY +++PE ++ K A NN+A G Y+ + I + ++D I + AD L+
Sbjct: 75 NNILSDTYGSLYNPENILITKNGGGAGNNWANG-YSHAERIFEDIMDMIDREADGSDSLE 133
Query: 468 GFLIFHS 488
GF + HS
Sbjct: 134 GFSLLHS 140
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 69.3 bits (162), Expect = 3e-13
Identities = 29/65 (44%), Positives = 43/65 (66%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
D V++G + +F P+ +I G+ A N +A+GHYT G E+ D VLD +R+ A+ C LQGF
Sbjct: 74 DAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAVLDVVRREAEACDALQGF 133
Query: 474 LIFHS 488
+ HS
Sbjct: 134 QLTHS 138
Score = 60.1 bits (139), Expect = 2e-10
Identities = 30/72 (41%), Positives = 38/72 (52%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + + GQ G Q+G A W EHG+ G T + N +F+E GK
Sbjct: 1 MREIVHIQAGQCGNQVGAAFWSTIADEHGLDSAGIY--HGTSEAQHERLNVYFNEAAGGK 58
Query: 248 HVPRAVFVDLEP 283
+VPRAV VDLEP
Sbjct: 59 YVPRAVLVDLEP 70
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.3 bits (65), Expect = 0.16
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 147 STASSLMARCPQTRPSGVETILSTLSSARPELASTYPVLSSSILN 281
ST SSL + ++PS T ST SSA P S+ + SSS+++
Sbjct: 173 STFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVS 217
Score = 25.4 bits (53), Expect = 4.6
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +3
Query: 75 SASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTY 254
S+S + + S S P+ S ++ T+SSL + S + S+LSS+ ++
Sbjct: 206 SSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASS 265
Query: 255 PVLSSSILN 281
SSSI++
Sbjct: 266 SSSSSSIIS 274
Score = 24.6 bits (51), Expect = 8.1
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +3
Query: 75 SASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTY 254
++S YT + ES S++ S ++ A P + V S+LSS+ P +ST+
Sbjct: 124 TSSEYTPSSTESSSLLDPSSVSS--------AILPSSTSVEVSISSSSLSSSDPLTSSTF 175
Query: 255 PVLSSS 272
LSSS
Sbjct: 176 SSLSSS 181
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.1 bits (62), Expect = 0.38
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +3
Query: 57 LKSKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARP 236
+K S + +++ P S SV P S T S++SS A PQ+ S ++S +SS
Sbjct: 456 VKQPTASVASSSVSVPSSSSVQPQSS-TPISSSSS--ASSPQSTLSTSSEVVSEVSSTLL 512
Query: 237 ELASTYPVLSSS 272
+S P SSS
Sbjct: 513 SGSSAIPSTSSS 524
>SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 649
Score = 27.9 bits (59), Expect = 0.87
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +3
Query: 201 ETILSTLSSARPELASTYPVLSSSILNLLLFDEVRTGT---YRQMFHPEQLITG--KEDA 365
ET+L LS R + + + +L LLL + T Y M E+ I +E
Sbjct: 545 ETLL--LSVVRGKSGIAFLFFMAIMLKLLLGKAILAITQSRYESMQQREEKINSWERERK 602
Query: 366 ANNYARGHYTIGKEIVDLV 422
ANN+ RGH I K+ D +
Sbjct: 603 ANNFFRGHIEIDKKTKDFL 621
>SPAC11E3.11c |||guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 27.5 bits (58), Expect = 1.1
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Frame = +3
Query: 54 KLKSKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARC----PQTRPSGVETILSTL 221
K KSK ++ + P S+SVM S T+ T +S +R R G+ T +S++
Sbjct: 85 KDKSKASMSTNDLPSHPRSQSVMGFSSSTSQLTGTSNSSRTRLNKDMRRDFGM-TSMSSI 143
Query: 222 SSARPELASTYPVLSSSILNLLLFDEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIG 401
+S+ P S PV S+ +L FD++ G F E +++ + +N A T
Sbjct: 144 TSSTP-TPSQLPVRPST--SLSFFDDIPLG---PSFSAETILSSLSISTSNNAMSKTTPA 197
Query: 402 KEIV 413
+V
Sbjct: 198 PPLV 201
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.5 bits (58), Expect = 1.1
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +3
Query: 75 SASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTY 254
S +L T S SV+ S TA +++++L P T S + + ST ++ L S+
Sbjct: 3303 STTLNTSTPITSSSVL--NSSTAITSSTALNTSTPITSSSVLNS--STAITSSSILNSST 3358
Query: 255 PVLSSSILN 281
PV SSS+LN
Sbjct: 3359 PVTSSSVLN 3367
Score = 27.1 bits (57), Expect = 1.5
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +3
Query: 75 SASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTY 254
S+S+ + P + S + + T +++S L + P T + V T S SS+ L S+
Sbjct: 2378 SSSVLNSSTPITSSTV-VNTSTPITSSSVLNSSTPITSSTVVNTSTSITSSS--VLNSST 2434
Query: 255 PVLSSSILN 281
P+ SSS+LN
Sbjct: 2435 PITSSSVLN 2443
Score = 26.6 bits (56), Expect = 2.0
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +3
Query: 75 SASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTY 254
S+S+ + P + S + S T +++S L + P T + + T ST ++ L S+
Sbjct: 1934 SSSVLNSSTPITSSTV-VNSSTPITSSSVLNSSTPITSSTALNT--STPITSSSVLNSST 1990
Query: 255 PVLSSSILN 281
P+ SSS+LN
Sbjct: 1991 PITSSSVLN 1999
Score = 26.6 bits (56), Expect = 2.0
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +3
Query: 75 SASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTY 254
S +L T S SV+ S TA +++S + + P T S + + ST ++ L S+
Sbjct: 3075 STALNTSTPITSSSVL--NSSTAITSSSIVNSSTPITSSSVLNS--STAITSSSILNSST 3130
Query: 255 PVLSSSILN 281
P+ SSSILN
Sbjct: 3131 PITSSSILN 3139
Score = 25.4 bits (53), Expect = 4.6
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +3
Query: 75 SASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTY 254
S +L T S SV+ S T ++++ L + P T + + T ST ++ L S+
Sbjct: 1875 STALNTSTPITSSSVL--NSSTPITSSTVLNSSTPITSSTALNT--STPITSSSVLNSST 1930
Query: 255 PVLSSSILN 281
P+ SSS+LN
Sbjct: 1931 PITSSSVLN 1939
Score = 25.4 bits (53), Expect = 4.6
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +3
Query: 75 SASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTY 254
S +L T S SV+ S T ++++ L + P T + + T ST ++ L S+
Sbjct: 2067 STALNTSTPITSSSVL--NSSTPITSSTVLNSSTPITSSTALNT--STPITSSSVLNSST 2122
Query: 255 PVLSSSILN 281
P+ SSS+LN
Sbjct: 2123 PITSSSVLN 2131
Score = 25.0 bits (52), Expect = 6.1
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +3
Query: 75 SASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTY 254
S L T S SV+ S T ++++ L + P T + + T ST ++ L S+
Sbjct: 939 STGLNTSTPITSSSVL--NSSTPITSSTVLNSSTPITSSTALNT--STPITSSSVLNSST 994
Query: 255 PVLSSSILN 281
P+ SSS+LN
Sbjct: 995 PITSSSVLN 1003
Score = 24.6 bits (51), Expect = 8.1
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 132 SFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVLSSSILN 281
S T +++S L + P T S + T ST ++ L S+ P+ SSSILN
Sbjct: 380 SSTPITSSSVLNSSTPITSSSILNT--STPITSSSVLNSSTPITSSSILN 427
Score = 24.6 bits (51), Expect = 8.1
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 132 SFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVLSSSILN 281
S T +++S L + P T + + T ST ++ L S+ P+ SSS+LN
Sbjct: 608 SSTPITSSSVLNSSTPITSSTALNT--STPITSSSVLNSSTPITSSSVLN 655
Score = 24.6 bits (51), Expect = 8.1
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +3
Query: 75 SASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTY 254
S +L T S SV+ S T +++++L P T S + + ST ++ L ++
Sbjct: 663 STALNTSTPITSSSVL--NSSTPITSSTALNTSTPITSSSVLNS--STAITSSTALNTST 718
Query: 255 PVLSSSILN 281
P+ SSS+LN
Sbjct: 719 PITSSSVLN 727
Score = 24.6 bits (51), Expect = 8.1
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +3
Query: 75 SASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTY 254
S +L T S SV+ S T +++S L P T S + + ST ++ L ++
Sbjct: 975 STALNTSTPITSSSVL--NSSTPITSSSVLNTSTPITSSSVLNS--STAITSSTALNTST 1030
Query: 255 PVLSSSILN 281
P+ SSS+LN
Sbjct: 1031 PITSSSVLN 1039
Score = 24.6 bits (51), Expect = 8.1
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +3
Query: 75 SASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTY 254
S+S+ + P + S + S T +++++L P T S + + ST ++ L S+
Sbjct: 3182 SSSIVNSSTPITSSSV-LNSSTPITSSTTLNTSTPITSSSVLNS--STAITSSSVLNSST 3238
Query: 255 PVLSSSILN 281
P+ SSS+LN
Sbjct: 3239 PITSSSVLN 3247
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 27.1 bits (57), Expect = 1.5
Identities = 24/97 (24%), Positives = 43/97 (44%)
Frame = +3
Query: 30 NSTFKHRKKLKSKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETI 209
+S+ + + S+S TL S S + S A S++SS + + SG+ +
Sbjct: 85 SSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSS--SGMSSS 142
Query: 210 LSTLSSARPELASTYPVLSSSILNLLLFDEVRTGTYR 320
+ SS+ P +S+Y S + L + + TYR
Sbjct: 143 SLSHSSSVPSSSSSYHSSSMTTSGLSSSASIVSSTYR 179
>SPBC215.02 |bob1|gim5, gim5|prefoldin subunit 5
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 154
Score = 26.6 bits (56), Expect = 2.0
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 319 LYVPVRTSSNNSRFKIDEDSTGYVLASSGLAEESVER 209
LYVP + + NS+ +D + YV S+G A E +R
Sbjct: 74 LYVPGKLNLGNSKLLVDIGTGYYVEKSAGEATEYYKR 110
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 25.8 bits (54), Expect = 3.5
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1
Query: 166 WPDAHRQDHRGWRRFFQHFLQR 231
W A R D R R FQHFLQR
Sbjct: 590 WLAACRSDPRCRRLDFQHFLQR 611
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 4.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 57 LKSKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCP 179
L+S +L+ P SR++ P S + STASSL P
Sbjct: 170 LRSSMPLVMANSLSPPSSRALKPIHSLSNPSTASSLEPSSP 210
>SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 25.4 bits (53), Expect = 4.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 278 QDRRRQHGVRACQLRSR*RKC*KNRLHPRWSCL 180
QD++ Q R R R RK +RLHP + C+
Sbjct: 7 QDKKNQEIFRISCQRCRQRKIKCDRLHPCFQCV 39
>SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 983
Score = 25.4 bits (53), Expect = 4.6
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Frame = +3
Query: 39 FKHRKKLKSKCVSASLYTLAK----PESRS--VMPAGSFTAWSTASSLMARCPQTRPSGV 200
F + K KS S LYT+ + PES + A + WST + + P+T +
Sbjct: 648 FVNAIKAKSFEFSTFLYTVIEYCVNPESPEHVIFEADAMELWSTFLMYIQKLPETFTLLI 707
Query: 201 ETILSTLSSARPELASTYPVLSS 269
+L LS A L ++SS
Sbjct: 708 PHLLYHLSQATSTLPFVLMIVSS 730
>SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 400
Score = 25.0 bits (52), Expect = 6.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 121 ITDLDSGLANVYRDALTHFDLSF 53
+T +D GLA YRD TH + +
Sbjct: 146 VTMIDFGLAKKYRDFKTHVHIPY 168
>SPBC3H7.15 |hhp1||serine/threonine protein kinase
Hhp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 365
Score = 24.6 bits (51), Expect = 8.1
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -1
Query: 175 HLAIRLDAVLQAV-KLPAGITDLDSGLANVYRDALTHFDLSF 53
H I+ D L + K + +D GLA YRD TH + +
Sbjct: 128 HRDIKPDNFLMGIGKRGNQVNIIDFGLAKKYRDHKTHLHIPY 169
>SPAC959.06c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 225
Score = 24.6 bits (51), Expect = 8.1
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 102 PESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLS-SARPELASTYPVLSSSIL 278
P++ G+F +T + L RCP+T P + LS S+R L T +S L
Sbjct: 166 PDNDEFTREGTFE--TTLAKLKNRCPETTPLKLTDCSHMLSPSSRKILLETVDKWLASAL 223
Query: 279 NL 284
N+
Sbjct: 224 NV 225
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 24.6 bits (51), Expect = 8.1
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +3
Query: 63 SKCVSASLYTLAKPESRSVMPAGSFTAWS---TASSLMARCPQTRPSGVETILSTLSSAR 233
S S+S + + S S +P S T+ S ++SS + +RPS + ++T+SS+
Sbjct: 189 SSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSS- 247
Query: 234 PELASTYPVLSSS 272
ST V SS
Sbjct: 248 -TFISTVTVTPSS 259
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 24.6 bits (51), Expect = 8.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 201 ETILSTLSSARPELASTYPVLSSSILNLL 287
++ILS S A+PEL T SSS ++ L
Sbjct: 107 DSILSAKSKAKPELLRTLTSKSSSAVDWL 135
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,217,189
Number of Sequences: 5004
Number of extensions: 47174
Number of successful extensions: 188
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 190087364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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