Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1541
(490 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 151 3e-37
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 151 3e-37
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 151 3e-37
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 149 1e-36
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 134 2e-32
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 130 5e-31
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 130 5e-31
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 130 5e-31
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 129 1e-30
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 129 1e-30
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 128 3e-30
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 128 3e-30
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 120 6e-28
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 120 7e-28
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 115 2e-26
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 115 2e-26
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 76 1e-14
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 76 1e-14
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 76 2e-14
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 76 2e-14
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 72 2e-13
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 72 2e-13
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 62 2e-10
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 62 2e-10
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 53 1e-07
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 53 1e-07
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.26
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 30 1.0
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 28 4.2
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 28 4.2
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 28 4.2
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 28 4.2
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 28 4.2
Z48585-4|CAA88480.1| 476|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 27 9.7
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 27 9.7
U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical p... 27 9.7
U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical p... 27 9.7
U49829-1|AAA93382.1| 138|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF068716-7|AAC17746.1| 384|Caenorhabditis elegans Hypothetical ... 27 9.7
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 151 bits (365), Expect = 3e-37
Identities = 63/75 (84%), Positives = 72/75 (96%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 248 HVPRAVFVDLEPTVV 292
HVPRAV VDLEPTV+
Sbjct: 61 HVPRAVMVDLEPTVI 75
Score = 133 bits (321), Expect = 8e-32
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = +3
Query: 288 LFDEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 467
+ DE+RTGTYR +FHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQ
Sbjct: 74 VIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQ 133
Query: 468 GFLIFHS 488
GFL+FHS
Sbjct: 134 GFLVFHS 140
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 151 bits (365), Expect = 3e-37
Identities = 63/75 (84%), Positives = 72/75 (96%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 248 HVPRAVFVDLEPTVV 292
HVPRAV VDLEPTV+
Sbjct: 61 HVPRAVMVDLEPTVI 75
Score = 133 bits (321), Expect = 8e-32
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = +3
Query: 288 LFDEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 467
+ DE+RTGTYR +FHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQ
Sbjct: 74 VIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQ 133
Query: 468 GFLIFHS 488
GFL+FHS
Sbjct: 134 GFLVFHS 140
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 151 bits (365), Expect = 3e-37
Identities = 63/75 (84%), Positives = 72/75 (96%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 248 HVPRAVFVDLEPTVV 292
HVPRAV VDLEPTV+
Sbjct: 61 HVPRAVMVDLEPTVI 75
Score = 133 bits (321), Expect = 8e-32
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = +3
Query: 288 LFDEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 467
+ DE+RTGTYR +FHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQ
Sbjct: 74 VIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQ 133
Query: 468 GFLIFHS 488
GFL+FHS
Sbjct: 134 GFLVFHS 140
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 149 bits (360), Expect = 1e-36
Identities = 62/74 (83%), Positives = 71/74 (95%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 251 VPRAVFVDLEPTVV 292
VPRAV VDLEPTV+
Sbjct: 61 VPRAVMVDLEPTVI 74
Score = 133 bits (321), Expect = 8e-32
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = +3
Query: 288 LFDEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 467
+ DE+RTGTYR +FHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQ
Sbjct: 73 VIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQ 132
Query: 468 GFLIFHS 488
GFL+FHS
Sbjct: 133 GFLVFHS 139
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 134 bits (325), Expect = 2e-32
Identities = 57/75 (76%), Positives = 65/75 (86%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 248 HVPRAVFVDLEPTVV 292
HVPRA+FVDLEPTV+
Sbjct: 61 HVPRAIFVDLEPTVI 75
Score = 121 bits (291), Expect = 3e-28
Identities = 50/67 (74%), Positives = 62/67 (92%)
Frame = +3
Query: 288 LFDEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 467
+ DEVRTGTY ++FHPEQLI+GKEDAANNYARGHYTIGKE++D+V+DR+R+L ++C LQ
Sbjct: 74 VIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQ 133
Query: 468 GFLIFHS 488
GFLIFHS
Sbjct: 134 GFLIFHS 140
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 130 bits (314), Expect = 5e-31
Identities = 58/75 (77%), Positives = 66/75 (88%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 248 HVPRAVFVDLEPTVV 292
+VPR++FVDLEPTVV
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 126 bits (304), Expect = 9e-30
Identities = 51/65 (78%), Positives = 62/65 (95%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
DE+RTGTY+++FHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LAD C+GLQGF
Sbjct: 74 DEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGF 133
Query: 474 LIFHS 488
+FHS
Sbjct: 134 FVFHS 138
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 130 bits (314), Expect = 5e-31
Identities = 56/76 (73%), Positives = 65/76 (85%)
Frame = +2
Query: 65 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 244
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 245 KHVPRAVFVDLEPTVV 292
KHVPRA+ VDLEPT +
Sbjct: 65 KHVPRAIMVDLEPTPI 80
Score = 124 bits (298), Expect = 5e-29
Identities = 50/65 (76%), Positives = 61/65 (93%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
DE+RTGTY+ +FHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+DR+R+L + C GLQGF
Sbjct: 81 DEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQGF 140
Query: 474 LIFHS 488
L+FHS
Sbjct: 141 LVFHS 145
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 130 bits (314), Expect = 5e-31
Identities = 58/75 (77%), Positives = 66/75 (88%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 248 HVPRAVFVDLEPTVV 292
+VPR++FVDLEPTVV
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 126 bits (304), Expect = 9e-30
Identities = 51/65 (78%), Positives = 62/65 (95%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
DE+RTGTY+++FHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LAD C+GLQGF
Sbjct: 74 DEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGF 133
Query: 474 LIFHS 488
+FHS
Sbjct: 134 FVFHS 138
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 129 bits (311), Expect = 1e-30
Identities = 57/75 (76%), Positives = 66/75 (88%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 248 HVPRAVFVDLEPTVV 292
+VPR++FVDLEPTVV
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 126 bits (304), Expect = 9e-30
Identities = 51/65 (78%), Positives = 62/65 (95%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
DE+RTGTY+++FHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LAD C+GLQGF
Sbjct: 74 DEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGF 133
Query: 474 LIFHS 488
+FHS
Sbjct: 134 FVFHS 138
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 129 bits (311), Expect = 1e-30
Identities = 57/75 (76%), Positives = 66/75 (88%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 248 HVPRAVFVDLEPTVV 292
+VPR++FVDLEPTVV
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 126 bits (304), Expect = 9e-30
Identities = 51/65 (78%), Positives = 62/65 (95%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
DE+RTGTY+++FHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LAD C+GLQGF
Sbjct: 74 DEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGF 133
Query: 474 LIFHS 488
+FHS
Sbjct: 134 FVFHS 138
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 128 bits (308), Expect = 3e-30
Identities = 57/75 (76%), Positives = 66/75 (88%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 248 HVPRAVFVDLEPTVV 292
+VPR++FVDLEPTVV
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 122 bits (295), Expect = 1e-28
Identities = 49/65 (75%), Positives = 60/65 (92%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
DE+RTG Y+++FHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRIR+LAD C+GLQGF
Sbjct: 74 DEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGF 133
Query: 474 LIFHS 488
+FHS
Sbjct: 134 FVFHS 138
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 128 bits (308), Expect = 3e-30
Identities = 57/75 (76%), Positives = 66/75 (88%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 248 HVPRAVFVDLEPTVV 292
+VPR++FVDLEPTVV
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 122 bits (295), Expect = 1e-28
Identities = 49/65 (75%), Positives = 60/65 (92%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
DE+RTG Y+++FHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRIR+LAD C+GLQGF
Sbjct: 74 DEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGF 133
Query: 474 LIFHS 488
+FHS
Sbjct: 134 FVFHS 138
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 120 bits (289), Expect = 6e-28
Identities = 53/74 (71%), Positives = 59/74 (79%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 251 VPRAVFVDLEPTVV 292
VPR +FVDLEPTVV
Sbjct: 68 VPRCLFVDLEPTVV 81
Score = 115 bits (276), Expect = 2e-26
Identities = 47/65 (72%), Positives = 60/65 (92%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
DEVRTGTYR +FHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF
Sbjct: 82 DEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF 141
Query: 474 LIFHS 488
+IFHS
Sbjct: 142 VIFHS 146
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 120 bits (288), Expect = 7e-28
Identities = 48/65 (73%), Positives = 59/65 (90%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
DE+RTG Y+++FHPEQ++TGKEDAANNYARGHYT+GKEI+D LDRIR+LA+ C GLQGF
Sbjct: 73 DEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANNCEGLQGF 132
Query: 474 LIFHS 488
+FHS
Sbjct: 133 FVFHS 137
Score = 117 bits (282), Expect = 4e-27
Identities = 54/75 (72%), Positives = 59/75 (78%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 248 HVPRAVFVDLEPTVV 292
HVPR++FVDLEPTVV
Sbjct: 58 HVPRSIFVDLEPTVV 72
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 115 bits (276), Expect = 2e-26
Identities = 47/67 (70%), Positives = 57/67 (85%)
Frame = +3
Query: 288 LFDEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 467
+ DE+R G Y +FHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDRIRK + C GLQ
Sbjct: 77 VLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQ 136
Query: 468 GFLIFHS 488
GFL+FHS
Sbjct: 137 GFLVFHS 143
Score = 101 bits (243), Expect = 2e-22
Identities = 43/74 (58%), Positives = 55/74 (74%)
Frame = +2
Query: 71 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 250
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 251 VPRAVFVDLEPTVV 292
VPRA++VDLEPTV+
Sbjct: 65 VPRAIYVDLEPTVL 78
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 115 bits (276), Expect = 2e-26
Identities = 47/65 (72%), Positives = 60/65 (92%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
DEVRTGTYR +FHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF
Sbjct: 54 DEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF 113
Query: 474 LIFHS 488
+IFHS
Sbjct: 114 VIFHS 118
Score = 76.6 bits (180), Expect = 9e-15
Identities = 33/53 (62%), Positives = 39/53 (73%)
Frame = +2
Query: 134 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 292
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVV
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVV 53
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 76.2 bits (179), Expect = 1e-14
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD IRK A+ C LQGF
Sbjct: 74 DSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGF 133
Query: 474 LIFHS 488
+ HS
Sbjct: 134 QLTHS 138
Score = 68.5 bits (160), Expect = 2e-12
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDL--QLERIDVYYNEANNGK 58
Query: 248 HVPRAVFVDLEP 283
+VPRAV VDLEP
Sbjct: 59 YVPRAVLVDLEP 70
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 76.2 bits (179), Expect = 1e-14
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD IRK A+ C LQGF
Sbjct: 74 DSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGF 133
Query: 474 LIFHS 488
+ HS
Sbjct: 134 QLTHS 138
Score = 68.1 bits (159), Expect = 3e-12
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDL--QLERIDVYYNEANNGK 58
Query: 248 HVPRAVFVDLEP 283
+VPRAV VDLEP
Sbjct: 59 YVPRAVLVDLEP 70
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 75.8 bits (178), Expect = 2e-14
Identities = 33/65 (50%), Positives = 45/65 (69%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ C LQGF
Sbjct: 74 DSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGF 133
Query: 474 LIFHS 488
+ HS
Sbjct: 134 QLTHS 138
Score = 69.7 bits (163), Expect = 1e-12
Identities = 34/72 (47%), Positives = 43/72 (59%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 248 HVPRAVFVDLEP 283
+VPRAV VDLEP
Sbjct: 59 YVPRAVLVDLEP 70
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 75.8 bits (178), Expect = 2e-14
Identities = 33/65 (50%), Positives = 44/65 (67%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
D VR G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ C LQGF
Sbjct: 74 DSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGF 133
Query: 474 LIFHS 488
+ HS
Sbjct: 134 QMTHS 138
Score = 63.7 bits (148), Expect = 7e-11
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 248 HVPRAVFVDLEP 283
+VPRA VDLEP
Sbjct: 59 YVPRACLVDLEP 70
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 72.1 bits (169), Expect = 2e-13
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ LQGF
Sbjct: 74 DSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGF 133
Query: 474 LIFHS 488
+ HS
Sbjct: 134 QLTHS 138
Score = 70.1 bits (164), Expect = 8e-13
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 248 HVPRAVFVDLEP 283
+VPRAV VDLEP
Sbjct: 59 YVPRAVLVDLEP 70
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 72.1 bits (169), Expect = 2e-13
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = +3
Query: 294 DEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 473
D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ LQGF
Sbjct: 74 DSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGF 133
Query: 474 LIFHS 488
+ HS
Sbjct: 134 QLTHS 138
Score = 70.1 bits (164), Expect = 8e-13
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 248 HVPRAVFVDLEP 283
+VPRAV VDLEP
Sbjct: 59 YVPRAVLVDLEP 70
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +3
Query: 300 VRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLI 479
VR+ Y ++F PE ++G+ A NN++RG+Y G EIVD VL IR+ A+ L+GF +
Sbjct: 76 VRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQL 135
Query: 480 FHS 488
HS
Sbjct: 136 IHS 138
Score = 62.1 bits (144), Expect = 2e-10
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 248 HVPRAVFVDLEP 283
+VPRA+ VDL+P
Sbjct: 59 YVPRAILVDLDP 70
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +3
Query: 300 VRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLI 479
VR+ Y ++F PE ++G+ A NN++RG+Y G EIVD VL IR+ A+ L+GF +
Sbjct: 76 VRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQL 135
Query: 480 FHS 488
HS
Sbjct: 136 IHS 138
Score = 62.1 bits (144), Expect = 2e-10
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +2
Query: 68 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 247
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 248 HVPRAVFVDLEP 283
+VPRA+ VDL+P
Sbjct: 59 YVPRAILVDLDP 70
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 52.8 bits (121), Expect = 1e-07
Identities = 28/71 (39%), Positives = 39/71 (54%)
Frame = +2
Query: 80 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 259
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 260 AVFVDLEPTVV 292
AV VDLEP V+
Sbjct: 65 AVLVDLEPRVI 75
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 52.8 bits (121), Expect = 1e-07
Identities = 28/71 (39%), Positives = 39/71 (54%)
Frame = +2
Query: 80 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 259
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 260 AVFVDLEPTVV 292
AV VDLEP V+
Sbjct: 65 AVLVDLEPRVI 75
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.26
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 96 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 251
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 303 GPHQTTVGSRSTKTARGTCLPAP 235
GPH T GS S T CLP P
Sbjct: 154 GPHTATTGSDSEGTCHDCCLPGP 176
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -2
Query: 318 CMCQCGPHQTTVG--SRSTKTARGTCLPAPVSLKKVLKESSPPPMVLSV 178
C+C G + G + T T+R T LP+ + + ++ PP SV
Sbjct: 646 CLCPAGQQPSNSGRCEKFTTTSRQTTLPSTTTTQGTTTTTTAPPPTTSV 694
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -2
Query: 318 CMCQCGPHQTTVG--SRSTKTARGTCLPAPVSLKKVLKESSPPPMVLSV 178
C+C G + G + T T+R T LP+ + + ++ PP SV
Sbjct: 743 CLCPAGQQPSNSGRCEKFTTTSRQTTLPSTTTTQGTTTTTTAPPPTTSV 791
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform a protein.
Length = 2560
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = -2
Query: 321 VCMCQCGPHQTTVGSRSTKTARGTCLPAPVSLKKVLKESSPPPMVLSVGIWPSGWMPCS 145
V Q P + + S+KT + P P S KK P++ +V + PCS
Sbjct: 451 VPQAQSPPRRGQEPTESSKTRKAQVKPTPTSEKKKESRELQKPIIATVQVPTESSHPCS 509
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = -2
Query: 321 VCMCQCGPHQTTVGSRSTKTARGTCLPAPVSLKKVLKESSPPPMVLSVGIWPSGWMPCS 145
V Q P + + S+KT + P P S KK P++ +V + PCS
Sbjct: 393 VPQAQSPPRRGQEPTESSKTRKAQVKPTPTSEKKKESRELQKPIIATVQVPTESSHPCS 451
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = -2
Query: 321 VCMCQCGPHQTTVGSRSTKTARGTCLPAPVSLKKVLKESSPPPMVLSVGIWPSGWMPCS 145
V Q P + + S+KT + P P S KK P++ +V + PCS
Sbjct: 575 VPQAQSPPRRGQEPTESSKTRKAQVKPTPTSEKKKESRELQKPIIATVQVPTESSHPCS 633
>Z48585-4|CAA88480.1| 476|Caenorhabditis elegans Hypothetical
protein ZK673.4 protein.
Length = 476
Score = 27.1 bits (57), Expect = 7.3
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = -2
Query: 300 PHQTTVGSRSTKTARGTCLPAPVSL------KKVLKESSPPPMVLSVGIWPSGWMPCSRQ 139
P ++ + +T TA T P+ +++ KKV K S PP VL+ G + W R
Sbjct: 364 PSTSSYMATATATATATPFPSKMTVLTLANGKKVTKAPSLPPSVLNSGKLVT-WKVSRRT 422
Query: 138 *SSQQALPIWTPAWP 94
S + P +P+ P
Sbjct: 423 HGSTSSTPRASPSLP 437
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 143 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 280
L H Q D +P + +GGG +F+ + +HV + F D E
Sbjct: 29 LNHLGQVDN-IPNNSAVGGGGAAFHHLHTSAATPRHVATSEFYDDE 73
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 26.6 bits (56), Expect = 9.7
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 114 SVMPAGSFTAWSTASSLMARCPQTRP--SGVETILSTLSSARPELASTYPVLSSSILNLL 287
+V+P+ T ST S+L P S + I+STLS L+ T LSS+ +L
Sbjct: 2051 NVLPSAGTTQPSTVSTLSPIVSTLSPIVSTLSPIVSTLSPIVSTLSPTVSTLSSNATSLT 2110
Query: 288 LFDEVRTGT 314
+ V T
Sbjct: 2111 PSNPVLVST 2119
>U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical
protein F36D4.5b protein.
Length = 315
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 96 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVLSSS 272
++ +SRS P F W+T + + QT P+G T++ S++ ++ P +S+
Sbjct: 248 SEKKSRSNSPP-IFRIWNTIKATINGTQQTAPTGAATVIPASSASNIGKTNSTPGTTSN 305
>U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical
protein F36D4.5a protein.
Length = 334
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 96 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVLSSS 272
++ +SRS P F W+T + + QT P+G T++ S++ ++ P +S+
Sbjct: 267 SEKKSRSNSPP-IFRIWNTIKATINGTQQTAPTGAATVIPASSASNIGKTNSTPGTTSN 324
>U49829-1|AAA93382.1| 138|Caenorhabditis elegans Hypothetical
protein F27D9.3 protein.
Length = 138
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 321 VCMCQCGPHQTTVGSRSTKTARGTCLPAPVSLKK 220
V + CGP G R+ T+R LP P S+ K
Sbjct: 3 VSVRMCGPVGKPSGPRALLTSRAFSLPFPASMTK 36
>AF068716-7|AAC17746.1| 384|Caenorhabditis elegans Hypothetical
protein F26D11.2 protein.
Length = 384
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 255 PVLSSSILNLLLFDEVRTGTYRQMFHPEQLITGKEDAANNYARGHYTIGKEI 410
P LS + ++L+ ++ RQ P +++ + N+ RG YTIG+EI
Sbjct: 176 PALSQN--SVLIEEDDNYPAVRQPLEPTKMMF-MSHSEPNFLRGDYTIGREI 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,587,686
Number of Sequences: 27780
Number of extensions: 283596
Number of successful extensions: 813
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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