Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1539
         (593 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   5.2  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   6.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   6.9  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   9.1  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   9.1  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   9.1  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   9.1  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   9.1  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   9.1  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 256 WSLQMKIYPIYNKN*VNMLINNYYTSLSSQNL 351
           +SL    YP +N+  V+  + N    LSS  L
Sbjct: 369 FSLNEDFYPTFNQTNVDQYLYNQTGPLSSTGL 400


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 57  TMKMFNSCRITKNE 98
           T K+FN C+  +NE
Sbjct: 92  TKKLFNKCKSIQNE 105


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 73  THAESPKTNYF 105
           T  E+PKTN+F
Sbjct: 409 TRCENPKTNFF 419


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 593 NAVESATGNCGRVSSPW 543
           N V   TGN GR+  P+
Sbjct: 96  NVVSDKTGNGGRLLQPY 112


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 420 VCNWNSAPSGKRT 458
           V NWN  P G  T
Sbjct: 67  VVNWNKIPEGANT 79


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 420 VCNWNSAPSGKRT 458
           V NWN  P G  T
Sbjct: 115 VVNWNKIPEGANT 127


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 420 VCNWNSAPSGKRT 458
           V NWN  P G  T
Sbjct: 115 VVNWNKIPEGANT 127


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 420 VCNWNSAPSGKRT 458
           V NWN  P G  T
Sbjct: 115 VVNWNKIPEGANT 127


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 249 VLMVFANENISYIQ*ELSEYVNKQLLYFFIFTKSEAFCVLSA 374
           VLM+    ++S I  EL     +  L   I  K+E  C+L +
Sbjct: 122 VLMIEQGASLSLITMELCGTTLQNRLDEAILIKNERICILKS 163


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,720
Number of Sequences: 438
Number of extensions: 2287
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)