Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1536
         (610 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23YT3 Cluster: Putative uncharacterized protein; n=1; ...    38   0.25 
UniRef50_A2DF89 Cluster: Putative uncharacterized protein; n=1; ...    34   3.0  
UniRef50_Q7SG46 Cluster: Putative uncharacterized protein NCU074...    33   5.3  
UniRef50_Q01Y69 Cluster: Putative uncharacterized protein precur...    33   7.0  

>UniRef50_Q23YT3 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 785

 Score = 37.5 bits (83), Expect = 0.25
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = -1

Query: 583 KFKTLRRCVYFHEKGNARDIATVTANDDQISLVKKPIMALRKLRVQSRGVHPDLMVRGSN 404
           KFK+L++C+YF E  N +  +    N + I  + KP   L KL  Q+   +  L  + SN
Sbjct: 666 KFKSLQQCIYFQEDFNQKRNSIKEQNINNIKNIAKPEQVLSKLPSQNSSPYQQLKQQLSN 725


>UniRef50_A2DF89 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 530

 Score = 33.9 bits (74), Expect = 3.0
 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
 Frame = +2

Query: 320 VSIASMPQKPISVFSSGTAACIQCEPKVIAATYHQ---VWMNS--STLNSELPQCHDRFF 484
           VSI   PQ+P+S+F+  T   ++ +PK  A   H    V + S  S   +E PQCH  F 
Sbjct: 241 VSIDHPPQQPLSIFNWFTLQYVKPDPKYHAKIKHPNCIVDIESIFSKHTTECPQCHRPFQ 300

Query: 485 YK 490
           +K
Sbjct: 301 FK 302


>UniRef50_Q7SG46 Cluster: Putative uncharacterized protein NCU07496.1;
            n=1; Neurospora crassa|Rep: Putative uncharacterized
            protein NCU07496.1 - Neurospora crassa
          Length = 2140

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 1    TALQEVLPGEDYEDQRWLRSLYTCWQHLAAKDGTKLTV 114
            TA+ E+ P +DYEDQ W+R     +      D + L V
Sbjct: 1234 TAVMEIPPSDDYEDQTWIRDPLPLYDEYDEDDDSYLPV 1271


>UniRef50_Q01Y69 Cluster: Putative uncharacterized protein
           precursor; n=2; Solibacter usitatus Ellin6076|Rep:
           Putative uncharacterized protein precursor - Solibacter
           usitatus (strain Ellin6076)
          Length = 680

 Score = 32.7 bits (71), Expect = 7.0
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 338 PQKPISVFSSGTAACIQCEPKVIAATYHQVWMNSSTLNSELPQCH 472
           P+  + V    TAAC+ C     AA++ Q  M SSTL      CH
Sbjct: 623 PRDWLKVQGPATAACLSCHTTKAAASHAQT-MTSSTLGEACDACH 666


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,668,267
Number of Sequences: 1657284
Number of extensions: 11447355
Number of successful extensions: 23695
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23694
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)