Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1536
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   1.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.1  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 58  SLYTCWQHLAAKDGTKLTVYG 120
           SLYTCW     K  T+  +YG
Sbjct: 229 SLYTCWSEFTQK--TQGQIYG 247


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +1

Query: 172  NAVCFPSRHII--SVLLLCKTVILCGF 246
            N   FPS+  I  +VLL C  + LCGF
Sbjct: 1113 NRCFFPSKIRICWNVLLNCVYLFLCGF 1139


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = -1

Query: 604 ISKTFI--NKFKTLRRCVYFHEKGNARDIATVTANDDQ 497
           I  TF   +K+         H KG+   + ++T NDD+
Sbjct: 227 IKATFFVSHKYTNYSAVQEMHRKGHEIAVHSITHNDDE 264


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 495 SHL*KNLSWHCGSSEF 448
           SHL  +L WH G   F
Sbjct: 330 SHLKAHLRWHTGERPF 345


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = +3

Query: 231 NIMWFLHNY*YSNVVTNVTLMDLTVNN*FLLVSHRCHKSQSQYFHLELL 377
           N++ F+     S V          + N F++++    +S S+Y H EL+
Sbjct: 161 NVLLFIFIVVKSGVAFQTIEFVSIIRNRFVILNRYIEESISKYKHAELV 209


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,869
Number of Sequences: 336
Number of extensions: 3158
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)