Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1535
(620 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 308 2e-86
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 305 3e-85
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 190 9e-51
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 157 8e-41
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.002
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.0
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.4
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.2
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 9.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.7
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 9.7
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 9.7
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 308 bits (757), Expect = 2e-86
Identities = 146/147 (99%), Positives = 146/147 (99%)
Frame = +2
Query: 98 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 277
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 278 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 457
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 458 GEFEAGISKNGQTREHALLAFTLGVKQ 538
GEFEAGISKNGQTREHALLAFTLGVKQ
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQ 147
Score = 32.3 bits (70), Expect = 0.004
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 537 KLIVGVNKMDFTEPPF 584
+LIVGVNKMD TEPP+
Sbjct: 147 QLIVGVNKMDSTEPPY 162
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 305 bits (748), Expect = 3e-85
Identities = 144/147 (97%), Positives = 145/147 (98%)
Frame = +2
Query: 98 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 277
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 278 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 457
DKLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 458 GEFEAGISKNGQTREHALLAFTLGVKQ 538
GEFEAGISKNGQTREHALLAFTLGVKQ
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQ 147
Score = 31.9 bits (69), Expect = 0.005
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 537 KLIVGVNKMDFTEPPF 584
+LIVGVNKMD T+PP+
Sbjct: 147 QLIVGVNKMDMTDPPY 162
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 190 bits (463), Expect = 9e-51
Identities = 90/90 (100%), Positives = 90/90 (100%)
Frame = +2
Query: 269 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 448
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 449 AGTGEFEAGISKNGQTREHALLAFTLGVKQ 538
AGTGEFEAGISKNGQTREHALLAFTLGVKQ
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQ 90
Score = 32.3 bits (70), Expect = 0.004
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 537 KLIVGVNKMDFTEPPF 584
+LIVGVNKMD TEPP+
Sbjct: 90 QLIVGVNKMDSTEPPY 105
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 157 bits (381), Expect = 8e-41
Identities = 74/74 (100%), Positives = 74/74 (100%)
Frame = +2
Query: 317 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 496
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 497 REHALLAFTLGVKQ 538
REHALLAFTLGVKQ
Sbjct: 61 REHALLAFTLGVKQ 74
Score = 32.3 bits (70), Expect = 0.004
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 537 KLIVGVNKMDFTEPPF 584
+LIVGVNKMD TEPP+
Sbjct: 74 QLIVGVNKMDSTEPPY 89
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.002
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 356 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 460
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.45
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 110 KTHINIVVIGHVDSGKST 163
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 119 INIVVIGHVDSGKST 163
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 341 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 442
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 341 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 442
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 200 DKRTIEKFEKEAQEMG 247
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 9.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 502 LTGLTVLRDTSFEFTGTGSYDEHSAISLR 416
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 200 DKRTIEKFEKEAQEMG 247
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 200 DKRTIEKFEKEAQEMG 247
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,124
Number of Sequences: 438
Number of extensions: 3326
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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