Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1533
         (523 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6AIU1 Cluster: Related to organic solvent tolerance pr...    33   3.0  
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    33   4.0  
UniRef50_Q4YWF0 Cluster: Putative uncharacterized protein; n=3; ...    32   6.9  

>UniRef50_Q6AIU1 Cluster: Related to organic solvent tolerance
           protein; n=1; Desulfotalea psychrophila|Rep: Related to
           organic solvent tolerance protein - Desulfotalea
           psychrophila
          Length = 932

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +3

Query: 219 DVVKYD-SGKKDLMTQKLDPFYNKEVYYKKKNFYLTFRVE 335
           DV++YD +GK DL+T  L     K  +Y  +N YL+++ E
Sbjct: 777 DVIQYDDNGKLDLVTDDLSEIEAKLKWYPWRNTYLSYKTE 816


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +2

Query: 116 DELTAYLVLSGHWSP 160
           DELTA+LVLSG+WSP
Sbjct: 161 DELTAHLVLSGYWSP 175


>UniRef50_Q4YWF0 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 396

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
 Frame = +3

Query: 228 KYDSGKKDLMTQKLDPFYNK---EVYYKKKNFYLTF 326
           +Y+SGKK+ + Q L   Y+K   E Y KK NFY +F
Sbjct: 73  EYNSGKKNKLIQLLTFLYSKNLREYYDKKNNFYNSF 108


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,340,232
Number of Sequences: 1657284
Number of extensions: 9486218
Number of successful extensions: 21490
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21479
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)