Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1533
         (523 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid pr...    31   1.3  
AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p pro...    31   1.3  
AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA...    31   1.3  
Z48443-1|CAA88358.1|  769|Drosophila melanogaster male-specific ...    29   5.1  
X89241-1|CAA61529.1|  773|Drosophila melanogaster MSL-2 protein.       29   5.1  
L42553-1|AAA75573.1|  773|Drosophila melanogaster RING finger pr...    29   5.1  
AY128426-1|AAM75019.1|  773|Drosophila melanogaster GH22488p pro...    29   5.1  
AE014134-608|AAN10368.1|  773|Drosophila melanogaster CG3241-PB,...    29   5.1  
AE014134-607|AAF51104.1|  773|Drosophila melanogaster CG3241-PA,...    29   5.1  

>J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid
           protein protein.
          Length = 846

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
 Frame = -3

Query: 500 DCGASS--QGWA*KNICSCRSSASTNLSSDRNRRCFGEKLIKLCFACKCTLN 351
           +CG      GW   N C C+ S  T +       C G    + C  CKCT+N
Sbjct: 623 ECGRCKCKPGWTGSN-CGCQESNDTCMPPGGGEICSGHGTCE-CGVCKCTVN 672


>AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p
           protein.
          Length = 846

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
 Frame = -3

Query: 500 DCGASS--QGWA*KNICSCRSSASTNLSSDRNRRCFGEKLIKLCFACKCTLN 351
           +CG      GW   N C C+ S  T +       C G    + C  CKCT+N
Sbjct: 623 ECGRCKCKPGWTGSN-CGCQESNDTCMPPGGGEICSGHGTCE-CGVCKCTVN 672


>AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA
           protein.
          Length = 846

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
 Frame = -3

Query: 500 DCGASS--QGWA*KNICSCRSSASTNLSSDRNRRCFGEKLIKLCFACKCTLN 351
           +CG      GW   N C C+ S  T +       C G    + C  CKCT+N
Sbjct: 623 ECGRCKCKPGWTGSN-CGCQESNDTCMPPGGGEICSGHGTCE-CGVCKCTVN 672


>Z48443-1|CAA88358.1|  769|Drosophila melanogaster male-specific
           lethal 2 protein.
          Length = 769

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 458 CSCRSSASTN-LSSDRNRRCFGEKLIKLCFACKCTLNSN 345
           C C  S S+N L++ RN RC   K    C  C C    N
Sbjct: 521 CRCGISGSSNTLTTCRNSRCPCYKSYNSCAGCHCVCCKN 559


>X89241-1|CAA61529.1|  773|Drosophila melanogaster MSL-2 protein.
          Length = 773

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 458 CSCRSSASTN-LSSDRNRRCFGEKLIKLCFACKCTLNSN 345
           C C  S S+N L++ RN RC   K    C  C C    N
Sbjct: 525 CRCGISGSSNTLTTCRNSRCPCYKSYNSCAGCHCVCCKN 563


>L42553-1|AAA75573.1|  773|Drosophila melanogaster RING finger
           protein protein.
          Length = 773

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 458 CSCRSSASTN-LSSDRNRRCFGEKLIKLCFACKCTLNSN 345
           C C  S S+N L++ RN RC   K    C  C C    N
Sbjct: 525 CRCGISGSSNTLTTCRNSRCPCYKSYNSCAGCHCVCCKN 563


>AY128426-1|AAM75019.1|  773|Drosophila melanogaster GH22488p
           protein.
          Length = 773

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 458 CSCRSSASTN-LSSDRNRRCFGEKLIKLCFACKCTLNSN 345
           C C  S S+N L++ RN RC   K    C  C C    N
Sbjct: 525 CRCGISGSSNTLTTCRNSRCPCYKSYNSCAGCHCVCCKN 563


>AE014134-608|AAN10368.1|  773|Drosophila melanogaster CG3241-PB,
           isoform B protein.
          Length = 773

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 458 CSCRSSASTN-LSSDRNRRCFGEKLIKLCFACKCTLNSN 345
           C C  S S+N L++ RN RC   K    C  C C    N
Sbjct: 525 CRCGISGSSNTLTTCRNSRCPCYKSYNSCAGCHCVCCKN 563


>AE014134-607|AAF51104.1|  773|Drosophila melanogaster CG3241-PA,
           isoform A protein.
          Length = 773

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 458 CSCRSSASTN-LSSDRNRRCFGEKLIKLCFACKCTLNSN 345
           C C  S S+N L++ RN RC   K    C  C C    N
Sbjct: 525 CRCGISGSSNTLTTCRNSRCPCYKSYNSCAGCHCVCCKN 563


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,515,959
Number of Sequences: 53049
Number of extensions: 419099
Number of successful extensions: 690
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)