Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1527
         (582 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy...    26   4.6  
SPAC1A6.05c |||triacylglycerol lipase|Schizosaccharomyces pombe|...    25   6.1  
SPBC646.07c |||enoyl reductase|Schizosaccharomyces pombe|chr 2||...    25   6.1  
SPBC336.08 |spc24||spindle pole body protein Spc24|Schizosacchar...    25   6.1  
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar...    25   6.1  
SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos...    25   8.1  

>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 4924

 Score = 25.8 bits (54), Expect = 4.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 244  DYIVSMQYYRLRLNMQFFFQYFVEYSI 324
            DYI+  Q Y L+ +  F+F+YF   SI
Sbjct: 4037 DYII--QLYSLKYDYDFWFKYFENLSI 4061


>SPAC1A6.05c |||triacylglycerol lipase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 483

 Score = 25.4 bits (53), Expect = 6.1
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = +1

Query: 37  RLLGLLISYFRYRKKYN*SVHSINITGDYFYNINNNKWLHYFDYNNIFFVLVMSHAICNS 216
           R++ LLI  F +++ Y+ S + +N+T            L+Y    N+  V     A C+ 
Sbjct: 237 RVMKLLIGDFTFQEAYDRSGYILNVTVSCGSLFEMPSLLNYITAPNV-LVWSAVVATCSV 295

Query: 217 PILF 228
           P LF
Sbjct: 296 PFLF 299


>SPBC646.07c |||enoyl reductase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 295

 Score = 25.4 bits (53), Expect = 6.1
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
 Frame = +1

Query: 121 YFYNINNNKWLHYFDYN-----NIFFVLVMSH 201
           + + I N KW++  DYN      I FVLVM H
Sbjct: 98  HLFFILNYKWIYRKDYNLCLNQKIAFVLVMLH 129


>SPBC336.08 |spc24||spindle pole body protein
           Spc24|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 198

 Score = 25.4 bits (53), Expect = 6.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 464 QARRGARHAQQI*NRENQDFRIA 396
           Q    ++HA++I +RE + FRIA
Sbjct: 69  QTAESSQHAEEILSREKEKFRIA 91


>SPAC9G1.10c |||inositol polyphosphate phosphatase
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1191

 Score = 25.4 bits (53), Expect = 6.1
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 392  CLRYGSLGSLCFISAEHVVRHVGPVGDHVPEVSLVVAKRAFV 517
            C R    GS  +ISAE+  R+     DH P  +L+ +K   V
Sbjct: 1087 CDRICYRGSPDYISAENYTRYELKASDHRPVSALIHSKAKMV 1128


>SPCC338.07c |||NatA N-acetyltransferase complex subunit
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 729

 Score = 25.0 bits (52), Expect = 8.1
 Identities = 13/54 (24%), Positives = 22/54 (40%)
 Frame = -1

Query: 555 FRDPTGRRGPNSPTNARFATTRLTSGTWSPTGPTWRTTCSADIKQREPRLPYRR 394
           + DP+ R          FA   L    +SP  P +    S +I + E +  Y++
Sbjct: 557 YDDPSFREAAQGSIEIYFALFDLPFAKYSPKLPDFEKLSSGEINEEEEKKIYKK 610


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,229,388
Number of Sequences: 5004
Number of extensions: 44745
Number of successful extensions: 114
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)