Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1526
(615 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 219 2e-57
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 219 2e-57
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 219 2e-57
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 219 2e-57
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 219 2e-57
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 219 2e-57
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 217 4e-57
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 216 1e-56
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 212 2e-55
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 8e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 8e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 2e-47
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 180 7e-46
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 1e-45
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 126 2e-29
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 109 1e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 89 2e-18
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 71 5e-13
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 47 9e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 47 9e-06
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 44 9e-05
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 33 0.12
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 33 0.12
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 33 0.12
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.21
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 32 0.28
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 32 0.28
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.28
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 29 2.6
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.1
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 8.1
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 8.1
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 8.1
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 8.1
AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl cyc... 27 8.1
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 8.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 219 bits (534), Expect = 2e-57
Identities = 98/103 (95%), Positives = 100/103 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSPRGTP 393
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV+P P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +3
Query: 453 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 566
IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGV 160
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 377 APEEHPVLLTEAPLNPKANREKMTQ 451
APEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQ 122
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 219 bits (534), Expect = 2e-57
Identities = 98/103 (95%), Positives = 100/103 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSPRGTP 393
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV+P P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +3
Query: 453 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 566
IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGV 160
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 377 APEEHPVLLTEAPLNPKANREKMTQ 451
APEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQ 122
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 219 bits (534), Expect = 2e-57
Identities = 98/103 (95%), Positives = 100/103 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSPRGTP 393
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV+P P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +3
Query: 453 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 566
IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGV 160
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 377 APEEHPVLLTEAPLNPKANREKMTQ 451
APEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQ 122
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 219 bits (534), Expect = 2e-57
Identities = 98/103 (95%), Positives = 100/103 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSPRGTP 393
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV+P P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +3
Query: 453 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 566
IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGV 160
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 377 APEEHPVLLTEAPLNPKANREKMTQ 451
APEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQ 122
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 219 bits (534), Expect = 2e-57
Identities = 98/103 (95%), Positives = 100/103 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSPRGTP 393
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV+P P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +3
Query: 453 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 566
IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGV 160
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 377 APEEHPVLLTEAPLNPKANREKMTQ 451
APEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQ 122
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 219 bits (534), Expect = 2e-57
Identities = 98/103 (95%), Positives = 100/103 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSPRGTP 393
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV+P P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +3
Query: 453 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 566
IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGV 160
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 377 APEEHPVLLTEAPLNPKANREKMTQ 451
APEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQ 122
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 217 bits (531), Expect = 4e-57
Identities = 97/103 (94%), Positives = 100/103 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSPRGTP 393
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV+P P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 79.8 bits (188), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 453 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 566
IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 160
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 377 APEEHPVLLTEAPLNPKANREKMTQ 451
APEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQ 122
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 216 bits (527), Expect = 1e-56
Identities = 95/103 (92%), Positives = 100/103 (97%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSPRGTP 393
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV+P P
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Score = 79.8 bits (188), Expect = 1e-15
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 453 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 566
IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 160
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 377 APEEHPVLLTEAPLNPKANREKMTQ 451
APEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 98 APEEHPVLLTEAPLNPKANREKMTQ 122
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 212 bits (517), Expect = 2e-55
Identities = 94/101 (93%), Positives = 98/101 (97%)
Frame = +1
Query: 91 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 270
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 271 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSPRGTP 393
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR++P P
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP 102
Score = 76.2 bits (179), Expect = 2e-14
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3
Query: 453 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 566
IMFETFNTPAMYV IQAVLSLYASGRTTGIVLD+GDGV
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGV 159
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 377 APEEHPVLLTEAPLNPKANREKMTQ 451
APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 97 APEEHPVLLTEAPLNPKSNREKMTQ 121
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 8e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SKRGILTLKYPIEHGIVTNWDDMEKI 342
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 8e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SKRGILTLKYPIEHGIVTNWDDMEKI 342
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 2e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SKRGILTLKYPIEHGIVTNWDDMEKI 342
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 180 bits (438), Expect = 7e-46
Identities = 80/85 (94%), Positives = 82/85 (96%)
Frame = +1
Query: 139 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 318
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 319 NWDDMEKIWHHTFYNELRVSPRGTP 393
NWDDMEKIWHHTFYNELRV+P P
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHP 89
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +3
Query: 453 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 566
IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV
Sbjct: 109 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGV 146
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 377 APEEHPVLLTEAPLNPKANREKMTQ 451
APEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 84 APEEHPVLLTEAPLNPKANREKMTQ 108
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 1e-45
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 SKRGILTLKYPIEHGIVTNWDDM 333
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 126 bits (303), Expect = 2e-29
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = +1
Query: 217 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSPRGTP 393
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV+P P
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 59
Score = 79.4 bits (187), Expect = 2e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +3
Query: 453 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 566
IMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV
Sbjct: 79 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGV 116
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 377 APEEHPVLLTEAPLNPKANREKMTQ 451
APEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 54 APEEHPVLLTEAPLNPKANREKMTQ 78
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 109 bits (263), Expect = 1e-24
Identities = 46/96 (47%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 288
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 289 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVSPRGTP 393
+YP+EHGIV NW DMEKIW + F ++L++ P P
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHP 106
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/38 (78%), Positives = 35/38 (92%)
Frame = +3
Query: 453 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 566
I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV
Sbjct: 126 IFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGV 163
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +2
Query: 380 PEEHPVLLTEAPLNPKANREKMTQ 451
PEEHPVLLT+APLNP NRE+ +
Sbjct: 102 PEEHPVLLTDAPLNPLKNRERSAE 125
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 89.4 bits (212), Expect = 2e-18
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 282
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 283 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVSPR 384
+ YP+++GIV NWDDM +W HTF E L + P+
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPK 103
Score = 54.0 bits (124), Expect = 8e-08
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +3
Query: 453 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 566
+MFE + ++YVA+QAVL+LYA G TG+V+DSGDGV
Sbjct: 126 VMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGV 163
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +2
Query: 380 PEEHPVLLTEAPLNPKANREKMTQ 451
P+E +LLTE PLNP +NREKM Q
Sbjct: 102 PKECKLLLTEPPLNPNSNREKMFQ 125
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 71.3 bits (167), Expect = 5e-13
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 228
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 229 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVSP 381
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR P
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEP 112
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 8/46 (17%)
Frame = +3
Query: 453 IMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGV 566
IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV
Sbjct: 136 IMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGV 181
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2
Query: 380 PEEHPVLLTEAPLNPKANRE 439
PE+H LLTE PLN NRE
Sbjct: 112 PEDHFFLLTEPPLNTPENRE 131
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 47.2 bits (107), Expect = 9e-06
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +1
Query: 100 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 279
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 280 LTLKYPIEHGIVTNWDDMEKIWHHTF 357
++ PIE G V NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 47.2 bits (107), Expect = 9e-06
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +1
Query: 100 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 279
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 280 LTLKYPIEHGIVTNWDDMEKIWHHTF 357
++ PIE G V NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3
Query: 453 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 557
IMFE F PA Y++ VLS +A GRT G+++DSG
Sbjct: 145 IMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSG 179
Score = 36.3 bits (80), Expect = 0.017
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 17/117 (14%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD--EAQS 267
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 268 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVSPRGTP 393
KR G + P ++ G++ +W+ EKI H++ N L +P P
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHP 125
Score = 34.7 bits (76), Expect = 0.053
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 374 SAPEEHPVLLTEAPLNPKANREKMTQ 451
S P EHPVL +E+ N +A REK+T+
Sbjct: 119 SNPSEHPVLFSESSWNDRARREKLTE 144
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1
Query: 469 STRPPCTWPSKPCSRCTRPVVPPVSCWTPATVSSHT 576
ST P T P P S T P VPPV+ TP T +S T
Sbjct: 659 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTTSTT 693
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1
Query: 469 STRPPCTWPSKPCSRCTRPVVPPVSCWTPATVSSHT 576
ST P T P P S T P VPPV+ TP T +S T
Sbjct: 715 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTTSTT 749
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1
Query: 469 STRPPCTWPSKPCSRCTRPVVPPVSCWTPATVSSHT 576
ST P T P P S T P VPPV+ TP T +S T
Sbjct: 538 STTAP-TAPVNPTSPTTAPTVPPVTTTTPTTTTSTT 572
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 32.7 bits (71), Expect = 0.21
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = -2
Query: 314 TIPCSMGYLRVRIPLLLCASSPT*ESFCPIPTITP*WRGLPTIEGN-TARGASSPAKPAL 138
T+ S PL++ +SS S TITP +G+PT N S+P P
Sbjct: 451 TLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKS 510
Query: 137 HIPEPLSTTNAATSSS 90
+ STT A +++S
Sbjct: 511 TVTASPSTTGATSTAS 526
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +1
Query: 418 QPQGQQREDDPGSCSKHSTRPPCTWPSKPCSRCTRPVVPPVSCWTPATVSSHTVPI 585
QPQ Q P SC C P PC T P PP+ C + P+
Sbjct: 624 QPQYPQSYQQP-SCGCQPQPQNCCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAPV 678
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +1
Query: 418 QPQGQQREDDPGSCSKHSTRPPCTWPSKPCSRCTRPVVPPVSCWTPATVSSHTVPI 585
QPQ Q P SC C P PC T P PP+ C + P+
Sbjct: 269 QPQYPQSYQQP-SCGCQPQPQNCCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAPV 323
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +1
Query: 418 QPQGQQREDDPGSCSKHSTRPPCTWPSKPCSRCTRPVVPPVSCWTPATVSSHTVPI 585
QPQ Q P SC C P PC T P PP+ C + P+
Sbjct: 221 QPQYPQSYQQP-SCGCQPQPQNCCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAPV 275
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
K08E7.5a protein.
Length = 1221
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +1
Query: 418 QPQGQQREDDPGSCSKHSTRPPCTWPSKPCSRCTRPVVPPVSCWTPATVSSHTVPI 585
QPQ Q P SC C P PC T P PP+ C + P+
Sbjct: 949 QPQYPQSYQQP-SCGCQPQPQNCCAPPAPCCLPTIPCCPPIPCCPQPKICCQPAPV 1003
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 32.3 bits (70), Expect = 0.28
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 565 TPSPESSTIPVVRPDAYSESTAWMATYMAGVL 470
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 478 PPCTWPSKPCS--RCTRPVVPPVSCWTPATVSSHTVPIYQGYRTSP 609
PP T+P S R T PP WT +TVP Y GYRT P
Sbjct: 229 PPATFPPGSVSTVRYTPGPTPPAP-WT------YTVPPYSGYRTIP 267
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 554 GVQHDTGGTTGRVQREHGLDGHVHGGRVECFEHDPGSSS 438
G H GG G HG GH HGG H S S
Sbjct: 184 GSHHHGGGGGGGGHHHHGGGGHYHGGGGGFHHHHHSSYS 222
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 139 KAGFAGDDAPRAVFPSIVGRPRHQG 213
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 460 SKHSTRPPCTWPSKPCSRCTRPVVPPVSCWTPATVSSHTVPI 585
S+ T P C ++ + TR VPP + P S+ PI
Sbjct: 349 SRAPTGPACPTTTRSAAPATRTAVPPRATAPPKAASASKAPI 390
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 164 ASSPAKPALHIPEPLSTTNAATSS 93
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 164 ASSPAKPALHIPEPLSTTNAATSS 93
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 164 ASSPAKPALHIPEPLSTTNAATSS 93
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 164 ASSPAKPALHIPEPLSTTNAATSS 93
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl
cyclase protein 19 protein.
Length = 1143
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 526 VVPPVSCWTPATVSSHTVP 582
V PPVSC TPA +++ T P
Sbjct: 309 VNPPVSCATPACINASTSP 327
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 324 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 214
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,893,598
Number of Sequences: 27780
Number of extensions: 386699
Number of successful extensions: 1555
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1543
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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