Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1523
         (610 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ILH7 Cluster: Putative uncharacterized protein; n=3; ...    40   0.061
UniRef50_A3DH11 Cluster: Putative uncharacterized protein; n=1; ...    36   0.99 
UniRef50_Q4QDZ7 Cluster: Serine carboxypeptidase (CBP1), putativ...    34   2.3  
UniRef50_UPI0000E81508 Cluster: PREDICTED: similar to Zinc finge...    33   5.3  
UniRef50_A6Q1F5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  
UniRef50_A6LUY5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  
UniRef50_A2FWJ3 Cluster: Clan CA, family C19, ubiquitin hydrolas...    32   9.3  

>UniRef50_Q8ILH7 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 433

 Score = 39.5 bits (88), Expect = 0.061
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = +2

Query: 464 SNNIIDYFNSSHVSHICNCNHRYITDNPQFNADLHVNQR--YCNHN 595
           +NN  D  N++++SH+CN N  Y+ D+P  N +    Q+    NHN
Sbjct: 207 NNNTFDNNNNNYISHLCNGNDNYLNDSPNHNINNCNTQKEIISNHN 252


>UniRef50_A3DH11 Cluster: Putative uncharacterized protein; n=1;
           Clostridium thermocellum ATCC 27405|Rep: Putative
           uncharacterized protein - Clostridium thermocellum
           (strain ATCC 27405 / DSM 1237)
          Length = 267

 Score = 35.5 bits (78), Expect = 0.99
 Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
 Frame = +2

Query: 440 LIADLSEVSNNIIDYFNSSHVSHICNCNHRYITDNPQF-NADLHVNQRYCNHN*IL 604
           +I +++++SNNI+   N  ++  +CN  H YI++N +F      + + + N N I+
Sbjct: 208 MIENINKISNNILFEENDFYIISLCNDIHSYISENDKFEKGKQELRKIFSNENRIM 263


>UniRef50_Q4QDZ7 Cluster: Serine carboxypeptidase (CBP1), putative;
           n=3; Leishmania|Rep: Serine carboxypeptidase (CBP1),
           putative - Leishmania major
          Length = 462

 Score = 34.3 bits (75), Expect = 2.3
 Identities = 19/68 (27%), Positives = 36/68 (52%)
 Frame = +3

Query: 54  SKPSYTRVNNVCIALGKSHRSGQYNTKYNYMLIRVNDRGESLHLNIRIYGLLPKLPSKLS 233
           + PS T  N+  I +G+S+  G Y    +Y ++  N+RG+ L +N++   +   L    +
Sbjct: 168 TSPSITGANDFYI-IGESY-GGHYVPAVSYRILMGNERGDGLRINLKGIAIGNGLTDPYT 225

Query: 234 EAMYHSLT 257
           +  YH+ T
Sbjct: 226 QLPYHAQT 233


>UniRef50_UPI0000E81508 Cluster: PREDICTED: similar to Zinc finger,
           MYND-type containing 12; n=1; Gallus gallus|Rep:
           PREDICTED: similar to Zinc finger, MYND-type containing
           12 - Gallus gallus
          Length = 365

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +3

Query: 60  PSYTRVNNVCIALGKSHRSGQYNTKYNYMLIRVNDRGESL-HLNIRIYGLLPKLPSKLSE 236
           P+Y  +   CI +G   ++  Y ++  ++++R  D   +  H   R +GLL        +
Sbjct: 132 PAYILLAEACIGVGNLQQASNYLSQAQWIVLRSPDCSSAFQHRLHRSFGLLYAADGNFDQ 191

Query: 237 AMYH 248
           A+YH
Sbjct: 192 ALYH 195


>UniRef50_A6Q1F5 Cluster: Putative uncharacterized protein; n=1;
           Nitratiruptor sp. SB155-2|Rep: Putative uncharacterized
           protein - Nitratiruptor sp. (strain SB155-2)
          Length = 865

 Score = 32.7 bits (71), Expect = 7.0
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
 Frame = +3

Query: 15  SRSMSPAVGKSYVSKPSYTRVNNVCIALGKSHRSGQYNTKYNYMLIRVNDRGESLHLNIR 194
           S  ++P    S V  P   +   V +      + G ++   NY       RGE++  N+R
Sbjct: 314 SIDVAPLQLYSVVKLPQIPKDATVALKAKGEEQKGNFHILSNYFQTEGRWRGETIEANLR 373

Query: 195 IYGLLPKLP-SKLSEAMYHSLTIRK---ILNNTFH 287
            +  +P    SKL +   H+   +K   I NN FH
Sbjct: 374 FFKDIPPFRLSKLPKTSMHANLSQKTFTIHNNIFH 408


>UniRef50_A6LUY5 Cluster: Putative uncharacterized protein; n=1;
           Clostridium beijerinckii NCIMB 8052|Rep: Putative
           uncharacterized protein - Clostridium beijerinckii NCIMB
           8052
          Length = 320

 Score = 32.7 bits (71), Expect = 7.0
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 416 IVIRATLLLIADLSEVSNNIIDYFNSSHVSHIC 514
           IV   TLL+  D+S +  N+++YF S  V ++C
Sbjct: 242 IVSPVTLLVQNDISNMLENVVNYFTSEQVQNVC 274


>UniRef50_A2FWJ3 Cluster: Clan CA, family C19, ubiquitin
           hydrolase-like cysteine peptidase; n=1; Trichomonas
           vaginalis G3|Rep: Clan CA, family C19, ubiquitin
           hydrolase-like cysteine peptidase - Trichomonas
           vaginalis G3
          Length = 949

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 102 KSHRSGQYNTKYNYMLIRVNDRGESLHLN 188
           K +R   +N KYNY LIRV+   + +H+N
Sbjct: 751 KGYRGKLFNNKYNYGLIRVSISKDGIHVN 779


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 508,396,435
Number of Sequences: 1657284
Number of extensions: 9493025
Number of successful extensions: 23224
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23211
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)