Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1520
(605 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q53GM6 Cluster: U5 snRNP-specific protein variant; n=13... 350 2e-95
UniRef50_Q6P2Q9 Cluster: Pre-mRNA-processing-splicing factor 8; ... 350 2e-95
UniRef50_A6R4K4 Cluster: Pre-mRNA processing splicing factor 8; ... 173 2e-42
UniRef50_Q8I1X5 Cluster: Pre-mRNA splicing factor, putative; n=1... 123 3e-27
UniRef50_A4IBT3 Cluster: PRP8 protein homologue, putative; n=8; ... 84 3e-15
UniRef50_Q2Y8H2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.56
UniRef50_Q4QET4 Cluster: Metallopeptidase, putative; n=3; Leishm... 36 0.74
UniRef50_Q4W1T6 Cluster: Putative uncharacterized protein hlyI; ... 35 1.3
UniRef50_A4XAZ2 Cluster: YD repeat protein; n=3; Salinispora|Rep... 34 3.0
UniRef50_Q5CPV9 Cluster: DNA replication repC1, AAA+ ATpase with... 34 3.0
UniRef50_A7NXG8 Cluster: Chromosome chr5 scaffold_2, whole genom... 33 4.0
UniRef50_Q7YXI4 Cluster: General control nonrepressed 5; n=4; Sc... 33 4.0
UniRef50_Q18KB7 Cluster: Adenosylcobinamide amidohydrolase; n=2;... 33 4.0
UniRef50_P34468 Cluster: Uncharacterized protein F58A4.1; n=2; C... 33 4.0
UniRef50_UPI0000DB73BC Cluster: PREDICTED: similar to Guanine nu... 33 5.2
UniRef50_A5NR56 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_Q5CW07 Cluster: Putative uncharacterized protein; n=2; ... 33 5.2
UniRef50_Q4DN11 Cluster: Putative uncharacterized protein; n=3; ... 33 5.2
UniRef50_Q5A8L5 Cluster: Potential mRNA deadenylase and CCR4-NOT... 33 6.9
UniRef50_UPI0000EBCDFB Cluster: PREDICTED: hypothetical protein;... 32 9.2
UniRef50_A7PCY8 Cluster: Chromosome chr17 scaffold_12, whole gen... 32 9.2
UniRef50_A5AMY7 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
>UniRef50_Q53GM6 Cluster: U5 snRNP-specific protein variant; n=13;
Eukaryota|Rep: U5 snRNP-specific protein variant - Homo
sapiens (Human)
Length = 398
Score = 350 bits (860), Expect = 2e-95
Identities = 149/189 (78%), Positives = 169/189 (89%)
Frame = -2
Query: 604 PQWGTHQQVHLPKHLPKHPALAHLQPLGWMHTQPNELPQLSPQDITTHAKIMSDNSSWDG 425
PQWGTHQ VHLP LP+H L ++PLGW+HTQPNE PQLSPQD+TTHAKIM+DN SWDG
Sbjct: 212 PQWGTHQTVHLPGQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDG 271
Query: 424 EKTIIITCSFTPGSCSLTAYKLTPSGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFL 245
EKTIIITCSFTPGSC+LTAYKLTPSGYEWG +NTD+GNNPKGYLPSHYERVQMLLSDRFL
Sbjct: 272 EKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFL 331
Query: 244 GYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTI 65
G+FMVP+Q SWNYNFMGVRHDPNMKY +QL NP+EFYHEVHRP+HF+NFA +++
Sbjct: 332 GFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQE--GEVY 389
Query: 64 AADREDLFA 38
+ADREDL+A
Sbjct: 390 SADREDLYA 398
>UniRef50_Q6P2Q9 Cluster: Pre-mRNA-processing-splicing factor 8;
n=106; Eukaryota|Rep: Pre-mRNA-processing-splicing factor
8 - Homo sapiens (Human)
Length = 2335
Score = 350 bits (860), Expect = 2e-95
Identities = 149/189 (78%), Positives = 169/189 (89%)
Frame = -2
Query: 604 PQWGTHQQVHLPKHLPKHPALAHLQPLGWMHTQPNELPQLSPQDITTHAKIMSDNSSWDG 425
PQWGTHQ VHLP LP+H L ++PLGW+HTQPNE PQLSPQD+TTHAKIM+DN SWDG
Sbjct: 2149 PQWGTHQTVHLPGQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDG 2208
Query: 424 EKTIIITCSFTPGSCSLTAYKLTPSGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFL 245
EKTIIITCSFTPGSC+LTAYKLTPSGYEWG +NTD+GNNPKGYLPSHYERVQMLLSDRFL
Sbjct: 2209 EKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFL 2268
Query: 244 GYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTI 65
G+FMVP+Q SWNYNFMGVRHDPNMKY +QL NP+EFYHEVHRP+HF+NFA +++
Sbjct: 2269 GFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQE--GEVY 2326
Query: 64 AADREDLFA 38
+ADREDL+A
Sbjct: 2327 SADREDLYA 2335
>UniRef50_A6R4K4 Cluster: Pre-mRNA processing splicing factor 8; n=1;
Ajellomyces capsulatus NAm1|Rep: Pre-mRNA processing
splicing factor 8 - Ajellomyces capsulatus NAm1
Length = 2739
Score = 173 bits (422), Expect = 2e-42
Identities = 89/193 (46%), Positives = 120/193 (62%), Gaps = 4/193 (2%)
Frame = -2
Query: 604 PQWGTHQQVHLPKHLPKHPALAHLQPLGWMHT-QPNELPQLSPQDITTHAKIMSDNSSWD 428
PQ G + + LP LP+H L+ L+PLG +HT NE ++ D+T HA++M+ +SSWD
Sbjct: 2553 PQVGNTRDIQLPHQLPQHEYLSSLEPLGVIHTLSGNEPSYMTAMDVTQHARLMNAHSSWD 2612
Query: 427 GEKTIIITCSFTPGSCSLTAYKLTPSGYEWGVRNTDRGNN-PKGYLPSHYERVQMLLSDR 251
+KT+ +T SFTPGS SL+A+ LTP GY+WG N D ++ P+GY S E+ Q+LLSD+
Sbjct: 2613 -KKTVTMTVSFTPGSVSLSAWALTPQGYKWGAENKDTSSDQPQGYSTSMGEKCQLLLSDK 2671
Query: 250 FLGYFMVPSQGSWNYNFMGVRHDPNMK--YGVQLGNPREFYHEVHRPAHFMNFAAMEDAA 77
GYF+VP WNY+FMG K V++ P FY + HRP HF NFA +ED
Sbjct: 2672 IRGYFLVPENNVWNYSFMGSSFSSLEKRPIYVKIDTPLRFYDDQHRPLHFQNFAELED-- 2729
Query: 76 APTIAADREDLFA 38
I DR D FA
Sbjct: 2730 ---IWVDRVDNFA 2739
>UniRef50_Q8I1X5 Cluster: Pre-mRNA splicing factor, putative; n=1;
Plasmodium falciparum 3D7|Rep: Pre-mRNA splicing factor,
putative - Plasmodium falciparum (isolate 3D7)
Length = 3136
Score = 123 bits (297), Expect = 3e-27
Identities = 55/123 (44%), Positives = 79/123 (64%), Gaps = 3/123 (2%)
Frame = -2
Query: 433 WDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGVRNTDRGNNPKGYLPSH---YERVQML 263
WD KTII+TCSFTPGSC++ AYKLT GY + + + ++ P+ YE VQ+L
Sbjct: 3006 WDKNKTIILTCSFTPGSCTINAYKLTSDGYSFA--KSKKNSSDLYVFPNVNNLYEPVQIL 3063
Query: 262 LSDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMED 83
LS+ F+GYF++P WNYN MG++ + N KY L P+ FY ++HRP HF+ F+ ++
Sbjct: 3064 LSNVFVGYFLIPDDHIWNYNLMGIKFNNNQKYAPHLDIPQPFYADIHRPNHFLQFSLLDQ 3123
Query: 82 AAA 74
A
Sbjct: 3124 RDA 3126
Score = 37.5 bits (83), Expect = 0.24
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -2
Query: 604 PQWGTHQQVHLPKHLPKHPALAHLQPLGWMHTQ----PNELPQLSPQDITTHAKIMSD 443
PQ G +Q V L ++P L +L+ LGW+HTQ N L+ D+ H + +
Sbjct: 2887 PQIGNYQSVTLSSYMPSSKYLQNLELLGWIHTQTTNCSNTNNHLTAYDMVAHFNFLQE 2944
>UniRef50_A4IBT3 Cluster: PRP8 protein homologue, putative; n=8;
Trypanosomatidae|Rep: PRP8 protein homologue, putative -
Leishmania infantum
Length = 2427
Score = 83.8 bits (198), Expect = 3e-15
Identities = 54/193 (27%), Positives = 79/193 (40%), Gaps = 5/193 (2%)
Frame = -2
Query: 604 PQWGTHQQVHLPKHLPKHPAL---AHLQPLGWMHTQPNELPQLSPQDITTHAKIMSDNSS 434
PQ+GT + P +P A A+L LG M +E QL+ D+ A+ + N
Sbjct: 2227 PQFGTAVEARTPPRIPFDAAALQEANLSFLGLMRIGESEA-QLTSHDLALQARALIANEG 2285
Query: 433 WDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGVRNTDR--GNNPKGYLPSHYERVQMLL 260
+ + + Y T G W +R P+ PS + L
Sbjct: 2286 MVPQGFVTAVLEMSEEGVMARCYSTTADGIAWAQSEHERLLKRTPEATDPSFSSPCRGTL 2345
Query: 259 SDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDA 80
S +F+VP+ WNY F G N +Y V + P F+H +HRP HF+NF + D
Sbjct: 2346 SSEARSFFLVPADRVWNYFFKGALWRENTEYDVVVDVPLPFFHALHRPDHFLNFTRIGDG 2405
Query: 79 AAPTIAADREDLF 41
A D D+F
Sbjct: 2406 AEVVDETDPNDVF 2418
>UniRef50_Q2Y8H2 Cluster: Putative uncharacterized protein; n=1;
Nitrosospira multiformis ATCC 25196|Rep: Putative
uncharacterized protein - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 100
Score = 36.3 bits (80), Expect = 0.56
Identities = 17/55 (30%), Positives = 33/55 (60%)
Frame = +2
Query: 122 VNLVVELARVAELHTVLHIRVVTDAHKVIIPTALGRHHEIAQESI*EQHLHSLVM 286
+ ++V LA +A +T +H+R+ TD K++ P A + + + E Q LH+L++
Sbjct: 37 LTILVVLATLAFQYTFVHLRINTDTAKLVAPDAPFQQYSRSYEEAFSQDLHTLLL 91
>UniRef50_Q4QET4 Cluster: Metallopeptidase, putative; n=3;
Leishmania|Rep: Metallopeptidase, putative - Leishmania
major
Length = 478
Score = 35.9 bits (79), Expect = 0.74
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = -2
Query: 583 QVHLPKHLPKHPALAHLQP--LGWMHTQPNELPQLSPQDITTHAKIMSDNSSWDGEKTII 410
Q+++ +L H L +P LGW HT P LS D+TT W I
Sbjct: 138 QIYMANYLEYHRRLGKAEPGCLGWYHTHPGYSCFLSGIDVTTQQGSQQIQDPWVA-LVID 196
Query: 409 ITCSFTPGSCSLTAYKLTPSGYEWGVRN 326
+ G S+ A++ P G G R+
Sbjct: 197 PVKTLQTGQFSMKAFRTYPGGDFQGQRS 224
>UniRef50_Q4W1T6 Cluster: Putative uncharacterized protein hlyI;
n=1; Pseudomonas aeruginosa|Rep: Putative
uncharacterized protein hlyI - Pseudomonas aeruginosa
Length = 257
Score = 35.1 bits (77), Expect = 1.3
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -2
Query: 379 SLTAYKLTPSGYE--WGVRNTDRGNNPKGYLPSHYERVQ 269
+L Y+++PSG RN +R + PKGY PS YE+ Q
Sbjct: 135 TLVVYRVSPSGSSSFTDSRNVNRTSAPKGYAPSLYEKYQ 173
>UniRef50_A4XAZ2 Cluster: YD repeat protein; n=3; Salinispora|Rep:
YD repeat protein - Salinispora tropica CNB-440
Length = 2007
Score = 33.9 bits (74), Expect = 3.0
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = -3
Query: 261 SQIDSWAISWCRPRAVGIITLWASVTTRI*STVCNSATLASSTT 130
S +D WAI P A G LW S TR T S TL + TT
Sbjct: 544 STVDEWAIGHQFPSAPGSPVLWLSSITRTGKTAGGSITLPALTT 587
>UniRef50_Q5CPV9 Cluster: DNA replication repC1, AAA+ ATpase with a
BRCT domain at the N- terminus; n=2;
Cryptosporidium|Rep: DNA replication repC1, AAA+ ATpase
with a BRCT domain at the N- terminus - Cryptosporidium
parvum Iowa II
Length = 874
Score = 33.9 bits (74), Expect = 3.0
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -2
Query: 463 HAKIMSDNSSWDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGVRNTDRGNNPK 302
+AK+ +DN W I + C+ PG CS ++ P +W +N+ N +
Sbjct: 631 NAKLRTDNE-WSLLSEIAVNCAVAPGLCSTNSFLARPEFPKWLGKNSTTNKNKR 683
>UniRef50_A7NXG8 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=7; Magnoliophyta|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 869
Score = 33.5 bits (73), Expect = 4.0
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = -2
Query: 313 NNPKGYLPSHYERVQMLLSDRFLGYF------MVPSQGSWNYNFMGVRHDPNMKYGVQLG 152
NNPK +PS E L RFLG++ ++ +G Y F G R +K +++
Sbjct: 429 NNPKHMVPSLLETGARLFVTRFLGHYISTGCLILLEEGGTIYTFEGSRKKCLLKVSLKIH 488
Query: 151 NPREFY 134
NP +FY
Sbjct: 489 NP-QFY 493
>UniRef50_Q7YXI4 Cluster: General control nonrepressed 5; n=4;
Schistosoma|Rep: General control nonrepressed 5 -
Schistosoma mansoni (Blood fluke)
Length = 899
Score = 33.5 bits (73), Expect = 4.0
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 235 MVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEVHRPAHFMNFA 95
M PSQG F V + +K YG Q+ N + YH H+ HF+ +A
Sbjct: 542 MFPSQGFTEIVFCAVIFNEQVKGYGTQMMNHLKDYHLQHKIFHFLTYA 589
>UniRef50_Q18KB7 Cluster: Adenosylcobinamide amidohydrolase; n=2;
Halobacteriaceae|Rep: Adenosylcobinamide amidohydrolase
- Haloquadratum walsbyi (strain DSM 16790)
Length = 340
Score = 33.5 bits (73), Expect = 4.0
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 596 GHTSTSTSAETPAKTSRSSTPATPWMDAHTT**VAPAIASG 474
G + T T ETP T+ + T T WM+A T APA+ +G
Sbjct: 103 GRSLTDTQTETPHNTTHAGTDDTIWMNAETR-TYAPALLTG 142
>UniRef50_P34468 Cluster: Uncharacterized protein F58A4.1; n=2;
Caenorhabditis|Rep: Uncharacterized protein F58A4.1 -
Caenorhabditis elegans
Length = 254
Score = 33.5 bits (73), Expect = 4.0
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -1
Query: 605 SPVGHTSTSTSAETPAKTSRSSTPATPWMDAHTT 504
SP TSTSTS T TSRS++ TP + TT
Sbjct: 96 SPSTSTSTSTSTSTSTSTSRSTSTVTPTTRSSTT 129
>UniRef50_UPI0000DB73BC Cluster: PREDICTED: similar to Guanine
nucleotide exchange factor DBS (DBLs big sister) (MCF2
transforming sequence-like protein); n=2; Apocrita|Rep:
PREDICTED: similar to Guanine nucleotide exchange factor
DBS (DBLs big sister) (MCF2 transforming sequence-like
protein) - Apis mellifera
Length = 1340
Score = 33.1 bits (72), Expect = 5.2
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 496 LPQLSPQDITTHAKIMSDNSSWDGEKTIIITCS-FTPGSCSLTAYKLTPSGY 344
+P L D+ H I N W+ KT+++ S F PG + AY L P+G+
Sbjct: 400 VPTLQEADLGFHLIIDRRNDKWNSVKTVLLKISGFFPGLVHI-AYVLRPAGF 450
>UniRef50_A5NR56 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium sp. 4-46|Rep: Putative uncharacterized
protein - Methylobacterium sp. 4-46
Length = 242
Score = 33.1 bits (72), Expect = 5.2
Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -1
Query: 224 PGQLEL*LYGRPSRPEYEVRC-ATRQPSRVLPRG 126
P QL L RPSRP+Y C +T P+R LPRG
Sbjct: 202 PAQLCL---ARPSRPDYRKLCGSTSMPTRTLPRG 232
>UniRef50_Q5CW07 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 608
Score = 33.1 bits (72), Expect = 5.2
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -2
Query: 604 PQWGTHQQVHLPKHLPKHPALAHLQPLGWMHTQPNELPQLSPQDITTHA 458
PQ + + P +P H A LQP+ +H QPNE Q++PQ H+
Sbjct: 185 PQPHQNPMMAHPIQMPSHGHGAQLQPIP-IHKQPNEYVQMAPQIPVFHS 232
>UniRef50_Q4DN11 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma cruzi|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 1690
Score = 33.1 bits (72), Expect = 5.2
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = -2
Query: 499 ELPQLSPQDITTHAKIMSDNSSWDGEKTIIITCSF----TPGSCSLTAYKLTPSGYEWGV 332
E P + PQD TTHA ++S +S + +CSF PGS + T S +W
Sbjct: 982 ERPLIVPQDSTTHASLLSSAASAGHDGVGCKSCSFDALVPPGSVASTITTAMRSPGQWDS 1041
Query: 331 RN 326
R+
Sbjct: 1042 RH 1043
>UniRef50_Q5A8L5 Cluster: Potential mRNA deadenylase and CCR4-NOT
complex subunit Pop2p; n=3; Saccharomycetales|Rep:
Potential mRNA deadenylase and CCR4-NOT complex subunit
Pop2p - Candida albicans (Yeast)
Length = 492
Score = 32.7 bits (71), Expect = 6.9
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 233 HEIAQESI*EQHLHSLVMTRQVAFRIISSISIPHAPF 343
+++ +E E+HL L T Q+ F+++S+ IPH F
Sbjct: 247 YDLTKEMYNEEHLAMLAQTSQINFQLLSTHGIPHFEF 283
>UniRef50_UPI0000EBCDFB Cluster: PREDICTED: hypothetical protein;
n=2; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 1390
Score = 32.3 bits (70), Expect = 9.2
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -2
Query: 550 PALAHLQPLGWMHTQPNELPQLSPQ 476
P L HLQPL QP LPQ PQ
Sbjct: 458 PGLPHLQPLSLPEIQPESLPQTLPQ 482
>UniRef50_A7PCY8 Cluster: Chromosome chr17 scaffold_12, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_12, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 432
Score = 32.3 bits (70), Expect = 9.2
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 400 SFTPGS-CSLTAYKLTPSGYEWGVRNTDRGNNPKGYLPSHYER 275
SFT GS +L Y+L P GV + NN GYL H++R
Sbjct: 76 SFTYGSGMNLDVYELKPYAENVGVMENFQSNNGGGYLLHHHQR 118
>UniRef50_A5AMY7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 429
Score = 32.3 bits (70), Expect = 9.2
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 400 SFTPGS-CSLTAYKLTPSGYEWGVRNTDRGNNPKGYLPSHYER 275
SFT GS +L Y+L P GV + NN GYL H++R
Sbjct: 140 SFTYGSGMNLDVYELKPYAENVGVMENFQSNNGGGYLLHHHQR 182
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,790,393
Number of Sequences: 1657284
Number of extensions: 13425185
Number of successful extensions: 42119
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 38266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41888
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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