Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1520
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         25   2.5  
AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    24   3.3  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   5.8  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   5.8  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   7.7  

>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 595 GTHQQVHLPKHLPKHPALAHLQPLGWMHTQPNELPQL 485
           G   +VH+ +H   H  LAHL  +G   +   + P L
Sbjct: 80  GNKIRVHIFEHAANHHHLAHLARVGLYGSSRKQKPVL 116


>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 81  LQRQQSPPTEKTCSHKF 31
           LQR Q PPT   C+  F
Sbjct: 211 LQRNQQPPTADCCTRAF 227


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 24/75 (32%), Positives = 30/75 (40%)
 Frame = +2

Query: 26   RLNLCEQVFSVGGDCWRCSIFHSSKVHEMRRSVNLVVELARVAELHTVLHIRVVTDAHKV 205
            R +LC   F+   DC RC+    +  H M        E  R AE+   L     TDA   
Sbjct: 951  RDDLCRMGFTPSPDCIRCTGVPETAEHAM-------FECPRFAEIRQKLLGEANTDA--- 1000

Query: 206  IIPTALGRHHEIAQE 250
            I P  L  H   +QE
Sbjct: 1001 ITPETLQFHLLQSQE 1015


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 251 IPGLFHGAVPGQLEL*LYGRPSRPE 177
           +PG+    + G + +  Y RP RPE
Sbjct: 94  VPGIVAAQIGGIVFISCYARPRRPE 118


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 35   LCEQVFSVGGDCWRCSIFHSSKVHEM 112
            LC   F+   DC RCS    +  H M
Sbjct: 930  LCRNGFTSSPDCQRCSGVPETAEHAM 955


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,185
Number of Sequences: 2352
Number of extensions: 14030
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)