Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1519
         (615 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.38 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   6.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +1

Query: 175 CNRIRQ*KWESSRRSQPTCG-YIYHG 249
           CNRIR  +W  +R +    G + YHG
Sbjct: 910 CNRIRNQRWIVNRDTSGATGPFAYHG 935



 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 298 FRSNDRSAGLLRYLQWTRGR 239
           FR ++ S  LL+Y  + RGR
Sbjct: 133 FRIDNESQELLKYPSFARGR 152


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 533 FSEDKIYQDLDLTN 574
           +S DKIY   D+TN
Sbjct: 275 YSSDKIYHPEDITN 288


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 343 FIAALDHCF*RLARLFRS 290
           F+A L+HCF  L  ++ S
Sbjct: 153 FVALLEHCFSMLNYVYSS 170


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 294 RNRRAKRQKQWSKAAIKSVREL*SSVTSLK 383
           +NRRAK ++Q  +   KS     +S T +K
Sbjct: 176 KNRRAKCRQQLQQQQNKSASRTTTSPTKVK 205


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,409
Number of Sequences: 336
Number of extensions: 3237
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)