Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1516
         (639 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ZSX8 Cluster: Putative uncharacterized protein PAE353...    35   1.9  
UniRef50_UPI00006CB840 Cluster: Protein kinase domain containing...    33   5.8  

>UniRef50_Q8ZSX8 Cluster: Putative uncharacterized protein PAE3533;
           n=1; Pyrobaculum aerophilum|Rep: Putative
           uncharacterized protein PAE3533 - Pyrobaculum aerophilum
          Length = 533

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = -3

Query: 97  NLRDPRPPNSCSPGDPLVLERPPPRGAP 14
           N+ D  PP  C PGDP     PPP  AP
Sbjct: 459 NVTDDPPPPPCPPGDPRCTPPPPPSPAP 486


>UniRef50_UPI00006CB840 Cluster: Protein kinase domain containing
           protein; n=1; Tetrahymena thermophila SB210|Rep: Protein
           kinase domain containing protein - Tetrahymena
           thermophila SB210
          Length = 1108

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -3

Query: 328 IDVPYFRQII*SRSAQNNFRITEINYASVNQSDAIYNLRTFISQHSYSKSF 176
           I+  Y+R  +   S +   +I   N +S + S A  N +TFI ++S+ K+F
Sbjct: 323 INYSYYRNQLLFNSQEQQLQIQNQNKSSSDSSQAEQNFQTFIEKNSFQKTF 373


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,020,138
Number of Sequences: 1657284
Number of extensions: 8597160
Number of successful extensions: 20933
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20906
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)