Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1516
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   2.8  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.8  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   6.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   6.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   6.6  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   6.6  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   8.7  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   8.7  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   8.7  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   8.7  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   8.7  
AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase l...    21   8.7  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 226 IYNLRTFISQHSYSKSFEN*LSSRYCN 146
           ++NL TF+   SY       + S  CN
Sbjct: 187 LFNLSTFLIPRSYIPPLSTSMRSHLCN 213


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 226 IYNLRTFISQHSYSKSFEN*LSSRYCN 146
           ++NL TF+   SY       + S  CN
Sbjct: 347 LFNLSTFLIPRSYIPPLSTSMRSHLCN 373


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 226 IYNLRTFISQHSYSKSFEN*LSSRYCN 146
           ++NL TF+   SY       + S  CN
Sbjct: 347 LFNLSTFLIPRSYIPPLSTSMRSHLCN 373


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -3

Query: 133 VAILSNNGFKKTNLRDPRPPNSCSPGDPLVLERPPP 26
           V++ S  G   T       P  C  GDP  L +PPP
Sbjct: 106 VSMASKMGLAPTGHPGAALPFFCHNGDP--LSQPPP 139


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 100 FF*NHYCLESQLNRTYYN 153
           FF NH+  + QL   Y+N
Sbjct: 49  FFGNHHIQQQQLQYGYHN 66


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 100 FF*NHYCLESQLNRTYYN 153
           FF NH+  + QL   Y+N
Sbjct: 49  FFGNHHIQQQQLQYGYHN 66


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 227 CI*LIDRCIIYFCNSKIV 280
           C  +I  CI YFC + I+
Sbjct: 290 CALIILLCIYYFCRAFII 307


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 501 RSMGSPLTADIMCTSMNNYVWLSFTYL 421
           +S G P   D++ T  +  +WL F  L
Sbjct: 18  KSKGDPTERDLIVTLDDRDLWLRFECL 44


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 100 FF*NHYCLESQLNRTYYN 153
           FF NH+  + QL   Y+N
Sbjct: 49  FFGNHHIQQQQLQYGYHN 66


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 100 FF*NHYCLESQLNRTYYN 153
           FF NH+  + QL   Y+N
Sbjct: 49  FFGNHHIQQQQLQYGYHN 66


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 422 SCELQGPL*KLRRDIVAVEITY 357
           S E+ GP   +  DIV V I Y
Sbjct: 118 SSEIYGPEFLMTEDIVLVSINY 139


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 422 SCELQGPL*KLRRDIVAVEITY 357
           S E+ GP   +  DIV V I Y
Sbjct: 118 SSEIYGPEFLMTEDIVLVSINY 139


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 422 SCELQGPL*KLRRDIVAVEITY 357
           S E+ GP   +  DIV V I Y
Sbjct: 118 SSEIYGPEFLMTEDIVLVSINY 139


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 422 SCELQGPL*KLRRDIVAVEITY 357
           S E+ GP   +  DIV V I Y
Sbjct: 118 SSEIYGPEFLMTEDIVLVSINY 139


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 422 SCELQGPL*KLRRDIVAVEITY 357
           S E+ GP   +  DIV V I Y
Sbjct: 117 SSEIYGPEFLMTEDIVLVSINY 138


>AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase like
           protein E4 protein.
          Length = 138

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 422 SCELQGPL*KLRRDIVAVEITY 357
           S E+ GP   +  DIV V I Y
Sbjct: 90  SSEIYGPEFLMTEDIVLVSINY 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,328
Number of Sequences: 336
Number of extensions: 2365
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)