Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1516
         (639 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095064-1|AAM11392.1|  552|Drosophila melanogaster RE06823p pro...    30   3.0  
AY052081-1|AAK93505.1|  552|Drosophila melanogaster SD03340p pro...    30   3.0  
AE014298-1051|AAF46266.2|  552|Drosophila melanogaster CG15478-P...    30   3.0  

>AY095064-1|AAM11392.1|  552|Drosophila melanogaster RE06823p
           protein.
          Length = 552

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -3

Query: 112 GFKKTNLRDPRPPNSCSPGDPLVLERPPP 26
           G   TNL+D  PP +  P   LVL  PPP
Sbjct: 260 GAVDTNLQDNTPPAASLPPQDLVLPPPPP 288


>AY052081-1|AAK93505.1|  552|Drosophila melanogaster SD03340p
           protein.
          Length = 552

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -3

Query: 112 GFKKTNLRDPRPPNSCSPGDPLVLERPPP 26
           G   TNL+D  PP +  P   LVL  PPP
Sbjct: 260 GAVDTNLQDNTPPAASLPPQDLVLPPPPP 288


>AE014298-1051|AAF46266.2|  552|Drosophila melanogaster CG15478-PA
           protein.
          Length = 552

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -3

Query: 112 GFKKTNLRDPRPPNSCSPGDPLVLERPPP 26
           G   TNL+D  PP +  P   LVL  PPP
Sbjct: 260 GAVDTNLQDNTPPAASLPPQDLVLPPPPP 288


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,292,529
Number of Sequences: 53049
Number of extensions: 427618
Number of successful extensions: 931
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)