Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1516
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72512-2|CAA96664.1|  322|Caenorhabditis elegans Hypothetical pr...    32   0.40 
Z72505-7|CAA96614.1|  333|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z70780-16|CAA94829.1|  333|Caenorhabditis elegans Hypothetical p...    29   2.8  

>Z72512-2|CAA96664.1|  322|Caenorhabditis elegans Hypothetical
           protein R07B5.4 protein.
          Length = 322

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 251 CICQSVRCNL*SSHFYFTTQLFK 183
           CIC   R ++ S +FYFT Q+FK
Sbjct: 286 CICLDARAHIVSCYFYFTHQIFK 308


>Z72505-7|CAA96614.1|  333|Caenorhabditis elegans Hypothetical
           protein C50C10.1 protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 251 CICQSVRCNL*SSHFYFTTQLFK 183
           CIC   R +  S +FYFT  +FK
Sbjct: 286 CICLDARAHFVSCYFYFTHHIFK 308


>Z70780-16|CAA94829.1|  333|Caenorhabditis elegans Hypothetical
           protein C50C10.1 protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 251 CICQSVRCNL*SSHFYFTTQLFK 183
           CIC   R +  S +FYFT  +FK
Sbjct: 286 CICLDARAHFVSCYFYFTHHIFK 308


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,816,069
Number of Sequences: 27780
Number of extensions: 224958
Number of successful extensions: 512
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)