Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1515
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0451 + 23021139-23021269,23021366-23021498,23021594-230217... 31 1.2
07_01_0408 - 3137705-3138017,3139361-3139371,3140693-3140770,314... 30 2.0
03_06_0245 - 32619410-32619510,32619698-32620668,32620694-32621169 30 2.0
11_01_0344 + 2558950-2558971,2560389-2560465,2560543-2560833 29 2.7
10_01_0270 - 2876907-2877547,2877838-2878012 29 2.7
06_01_0318 - 2284481-2284594,2285340-2286044,2286589-2286609,228... 29 2.7
03_06_0572 + 34812203-34812278,34812485-34813768,34813973-348140... 29 2.7
02_03_0167 - 15923872-15925683 29 2.7
02_02_0315 + 8872199-8872815,8873141-8873243,8873346-8873405,887... 29 2.7
12_02_1265 - 27435096-27437675 29 3.5
10_08_0738 - 20212220-20212282,20212387-20212593,20212690-202128... 29 3.5
07_03_0669 - 20542481-20542489,20543212-20543872,20543899-205439... 29 3.5
04_04_0512 + 25806599-25808080 29 3.5
04_01_0471 + 6099768-6100094,6100384-6100416 29 3.5
03_01_0270 - 2085461-2086205,2086260-2086339,2086598-2086690,208... 29 3.5
04_04_0776 - 28000220-28000337,28000760-28000872,28001194-280012... 29 4.7
03_04_0169 - 17959262-17959304,17959441-17959532,17959682-179597... 28 6.2
08_01_0397 - 3509186-3510291,3510322-3512335 28 8.2
02_05_0809 + 31928069-31928385,31929220-31929877 28 8.2
02_03_0131 - 15576422-15577021 28 8.2
01_01_0136 + 1237623-1237820,1238313-1239001,1239978-1240308,124... 28 8.2
>02_04_0451 +
23021139-23021269,23021366-23021498,23021594-23021789,
23023376-23023737,23024049-23024363
Length = 378
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 102 PKHRSP*QAFSSSNGTLYPSFELCCSSTDSRSPFDSTCRSYCSRRPRGTFFVYT-CF 269
P+ +P + FSS N L P S SR T + +PRG FF ++ C+
Sbjct: 322 PEPLAPPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFFCFSQCY 378
>07_01_0408 -
3137705-3138017,3139361-3139371,3140693-3140770,
3141105-3141206,3141309-3141380,3141484-3141558
Length = 216
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 172 AAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAA 327
AA + H P+I+ A P AA + +H PV++ +P A AA
Sbjct: 9 AAAIAPHLVPVIRGATPFAPAAATAAAISLHLVPVIRGATPFSSAVAAAAAA 60
>03_06_0245 - 32619410-32619510,32619698-32620668,32620694-32621169
Length = 515
Score = 29.9 bits (64), Expect = 2.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 104 WEDTAWPWPSSITPPWQIAK 45
W+D WPSS + PW++ K
Sbjct: 227 WQDVLLLWPSSSSSPWELTK 246
>11_01_0344 + 2558950-2558971,2560389-2560465,2560543-2560833
Length = 129
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = -2
Query: 282 LDYWRSMYIRRMFHGGGV----NNRTGMLNQRGCVSQYWSSITQNWGIMCRCLMKR 127
LD+WR +RR+ G V G+L Q G + + Q+ G +CRCL R
Sbjct: 32 LDWWRCARVRRLSVRGDVADADGGEDGVLGQAGGARLHGAIRVQD-GEVCRCLQLR 86
>10_01_0270 - 2876907-2877547,2877838-2878012
Length = 271
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Frame = +1
Query: 127 PFHQATA--HYTPVLSYAAPVLTHAAP-LIQHAGPIVHAAPVEHSSYIHASPVVQHFSPV 297
PFH+ HY S AP H P H P V++ P +Y H +PV + P
Sbjct: 160 PFHKKDFFFHYKNP-SPPAPAAYHKPPPSYTHPAPPVYSYPTP--AYSHPTPVYKQPLPT 216
Query: 298 QHAPVVHHAAIPIAVEHSDHVE 363
P+ H A V D E
Sbjct: 217 PSPPIYHPPAEEKKVAMQDDAE 238
>06_01_0318 -
2284481-2284594,2285340-2286044,2286589-2286609,
2287186-2287257,2287762-2287842,2288059-2288133,
2288197-2288484
Length = 451
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/79 (27%), Positives = 30/79 (37%)
Frame = -1
Query: 433 GTCDRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQG*SVGLLAKHVYT 254
G C R PRR R+HD DRS R + + H + +
Sbjct: 272 GECAR--SSPRRRRSRSHERDHDSERDRSDRDRGRHKDREHDRHAREDRDRDYRRSSYSS 329
Query: 253 KNVPRGRREQ*DRHVESKG 197
+NV R RE+ DR + G
Sbjct: 330 RNVDRQGRERRDRDSDRHG 348
>03_06_0572 +
34812203-34812278,34812485-34813768,34813973-34814049,
34814299-34814646
Length = 594
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 347 TPIMSKIMLPRSMSSHIPSRIPTPAITSPNTKP 445
TP M+ + P +M S + + TPA+T+P T P
Sbjct: 315 TPFMNPVTAP-TMPSPVTNPATTPAVTNPTTMP 346
>02_03_0167 - 15923872-15925683
Length = 603
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -2
Query: 420 AGVGILDGI*ELILRGSMIFDMIGVFDGNWNRSVVHDWSMLHRAEVL--DYWRSMYIRRM 247
AG+ +L+ + +++RGS + +FDG N+SVV W+ L +L DY +
Sbjct: 187 AGLPVLNSVLTMLVRGSHLDAARLLFDGICNKSVV-TWTALASGYLLRGDYLEVFDLFNR 245
Query: 246 FHGGGVN 226
G G N
Sbjct: 246 MRGVGKN 252
>02_02_0315 +
8872199-8872815,8873141-8873243,8873346-8873405,
8873558-8873632,8873718-8873792,8873876-8873956,
8874466-8874657,8874762-8874947,8875047-8875094
Length = 478
Score = 29.5 bits (63), Expect = 2.7
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Frame = +1
Query: 70 IDEGHGHAVSSQSIVRHDKPFHQATAHYT-----PVLSYAAPVLTHAAPLIQHAGPIVHA 234
ID+ V+ + +V K QA T P ++ AAP AAP A A
Sbjct: 319 IDDFFNKKVAPKELVDEIKEIGQALLPSTGTKSQPAITEAAPATAEAAPAAATATAAPPA 378
Query: 235 APVEHSSYIHASPVVQHFSPVQHAP 309
APVE +S A SP + P
Sbjct: 379 APVEETSTEAAPAEPTPLSPYTNYP 403
>12_02_1265 - 27435096-27437675
Length = 859
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 243 HGGGVNNRTGMLNQRGCVSQYWSSITQ-NWGIMCRCLMKRLVMANDALGRHSMAVALVYN 67
HGGG + L V QY+ ++ Q WG M ++ L DA + + + L+++
Sbjct: 287 HGGGPQSNLRSLKSLRSVEQYYHTLQQMKWGPMTEHVLDNLHCKIDAF-QANQVLKLLHD 345
Query: 66 TTLA 55
T+A
Sbjct: 346 HTIA 349
>10_08_0738 -
20212220-20212282,20212387-20212593,20212690-20212819,
20212919-20213089,20213311-20213433,20213517-20213618,
20214123-20214880
Length = 517
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 101 EDTAWPWPSSITPPWQIAKIEQTTAIL 21
E WP P S PP ++ K EQT ++
Sbjct: 136 EAARWPPPPSFQPPIEVIKAEQTAPLI 162
>07_03_0669 -
20542481-20542489,20543212-20543872,20543899-20543983,
20545311-20546625
Length = 689
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = -1
Query: 667 VESQGQEWTYWKRNELRGRRGQQEPAMKVQRVRQARSCVQ*R*IRCGGQLCIRPC 503
VES+G++ + + LRG R Q A + R RSC +RC + IR C
Sbjct: 553 VESEGEDHGFHLYSPLRGPRRQ---AGRSWRASCCRSCTSTSTLRCTQAMAIRRC 604
>04_04_0512 + 25806599-25808080
Length = 493
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/47 (21%), Positives = 24/47 (51%)
Frame = +1
Query: 328 IPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGDVVKG 468
+P V +S+ + +HA ++ P GD +++H++ + + G
Sbjct: 392 LPEYVSNSEELSNHATFNHKVEEDSSSPAAGDRENEHDSSNSATIDG 438
>04_01_0471 + 6099768-6100094,6100384-6100416
Length = 119
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 36 LLDFGYLPRWCYRRGPRPC-CVFPKHR 113
+L+F +LPR RRG R C V P H+
Sbjct: 67 VLNFAFLPRTSLRRGARACRIVVPHHK 93
>03_01_0270 -
2085461-2086205,2086260-2086339,2086598-2086690,
2086774-2086881,2087012-2087101,2087234-2087275,
2087516-2087587,2090848-2090985,2091074-2092624
Length = 972
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = -1
Query: 409 DPRRNMRTHTSREH-DLRHDRSV----RRQLESQRG 317
+PR R TSR+H RHDRSV R Q S RG
Sbjct: 292 EPRSKRRRSTSRDHYQERHDRSVSPSSREQRHSYRG 327
>04_04_0776 -
28000220-28000337,28000760-28000872,28001194-28001289,
28001647-28001763,28002136-28002267,28002348-28002524,
28002660-28002837,28003270-28003373,28003922-28003996
Length = 369
Score = 28.7 bits (61), Expect = 4.7
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 1 RHLNMFFKIAVVCSILAICQGGVI 72
RH+ + + A VC +A+C+GG +
Sbjct: 22 RHVQILKRSAAVCGAVAVCRGGAV 45
>03_04_0169 -
17959262-17959304,17959441-17959532,17959682-17959759,
17959938-17960075,17960174-17960302,17960556-17960685,
17960797-17960974,17961177-17961315,17961399-17961488,
17961633-17961794,17961966-17962130,17962250-17962387,
17962827-17963006,17963405-17963533,17963878-17964113,
17964233-17964395,17965260-17965628,17965724-17965828
Length = 887
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 237 GGVNNRTGMLNQRGCVSQYWSSITQNWGIMC 145
GG+N G+L RG ++ + + + + WG C
Sbjct: 451 GGMNAAAGILTARGGMTSHAAVVARGWGKCC 481
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -1
Query: 463 SRHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRHDRSVR-RQLESQRGARLE 305
SRHHH R DR RR+ RE +R R ++ E +R R E
Sbjct: 39 SRHHHREDRDDDRDRDRDRERRHREKERDREERKAREREEREKEKERERARRRE 92
>02_05_0809 + 31928069-31928385,31929220-31929877
Length = 324
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -1
Query: 682 KHWSRVESQGQEWTYWKRNELRGRRGQQEPAMKVQRVRQARSCVQ*R*IRCGG 524
K WSRV + W E R ++G+ E +++ + ARSC R I G
Sbjct: 41 KSWSRVVAGPYCWQEIDIEEWRQQQGKPEQLVRMVEMLVARSCGSCRRISVSG 93
>02_03_0131 - 15576422-15577021
Length = 199
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -1
Query: 439 RVGTCDRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGAR 311
R G DR PR R H R+ D DR R E +RG R
Sbjct: 20 RDGERDRELDRPRD--RDHRDRDRDKERDRDRDRDRERRRGER 60
>01_01_0136 +
1237623-1237820,1238313-1239001,1239978-1240308,
1240614-1241351
Length = 651
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +3
Query: 207 STCRSYCSRRPRG--TFFVYTCFASSPTLQPCATCSSRAPRC 326
+T + C+ P G ++ VY A PCA CS P C
Sbjct: 443 ATAKVPCAHAPYGCSSYVVYAGVADHQRACPCAPCSCPEPGC 484
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,935,511
Number of Sequences: 37544
Number of extensions: 502269
Number of successful extensions: 1759
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1758
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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