Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1515
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 36 0.021
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 36 0.028
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 34 0.11
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 34 0.11
AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical ... 31 0.79
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 30 1.4
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 30 1.4
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 30 1.4
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 30 1.4
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protei... 29 2.4
U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related... 29 3.2
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 28 5.6
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 28 5.6
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 28 5.6
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 28 5.6
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 28 5.6
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 28 7.4
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 28 7.4
Z81464-7|CAB03857.2| 338|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical p... 27 9.8
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical ... 27 9.8
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 36.3 bits (80), Expect = 0.021
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Frame = +1
Query: 250 SSYIHASPVVQHFSPVQHAPVVHHAAI--PIAVEHSDHVE--DHAPA--KYEF--SYSVE 405
S+ H+S +H + +PV + ++ P A EH +H E H+PA + EF S SV
Sbjct: 703 SNQFHSS---EHIEEARQSPVTNQESVHSPHASEHFEHREVVPHSPAASQEEFGRSPSVH 759
Query: 406 DPHTGDHKSQH-ETRDGDVVKGEYSLLQPDGSIRKVEYTADHH 531
PH +H H E + V E + P +HH
Sbjct: 760 SPHVSEHFEHHEEAQHSPVASQEEAARSPSVHSSHASEHFEHH 802
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/72 (23%), Positives = 28/72 (38%)
Frame = +1
Query: 226 VHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 405
V + P S + +S +HF +H V + S+H+E+ + SV
Sbjct: 671 VASEPAARSPSVQSSRTSEHF---EHRGEVPQSPSSNQFHSSEHIEEARQSPVTNQESVH 727
Query: 406 DPHTGDHKSQHE 441
PH +H E
Sbjct: 728 SPHASEHFEHRE 739
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 35.9 bits (79), Expect = 0.028
Identities = 31/121 (25%), Positives = 37/121 (30%)
Frame = +1
Query: 76 EGHGHAVSSQSIVRHDKPFHQATAHYTPVLSYAAPVLTHAAPLIQHAGPIVHAAPVEHSS 255
E HGH S + H H A AH+ + H AP H H H
Sbjct: 443 ESHGHGHHSPAHHGHHGEHHHAPAHHGHHGEH------HHAPA-HHGHHGEHGTHHGHHG 495
Query: 256 YIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQ 435
H+ H HAP H H H E H + + H G H S
Sbjct: 496 SHHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSH 555
Query: 436 H 438
H
Sbjct: 556 H 556
Score = 30.7 bits (66), Expect = 1.0
Identities = 39/172 (22%), Positives = 55/172 (31%), Gaps = 14/172 (8%)
Frame = +1
Query: 82 HGHAVSSQSIVRHDK--PFHQATAHYTPVLSYAAPVLTHAAPLIQHAGPIVHAAPVEHSS 255
HGH S S H H A AH+ + H H P H EH +
Sbjct: 491 HGHHGSHHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGE---HHHAPAHHGHHGEHGT 547
Query: 256 Y-----IHASPV------VQHFSPVQHAPVVHHAAIPIAV-EHSDHVEDHAPAKYEFSYS 399
+ H SP H +P H HH + + H H H + +
Sbjct: 548 HHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHG 607
Query: 400 VEDPHTGDHKSQHETRDGDVVKGEYSLLQPDGSIRKVEYTADHHNGFNAIVH 555
H G H + + G G + P E+ DHH+G + + H
Sbjct: 608 EHGVHHGHHGAGYGAHHGH--HGAHHHHAPHHEHH--EHHGDHHHGSHGVHH 655
Score = 29.9 bits (64), Expect = 1.8
Identities = 28/119 (23%), Positives = 38/119 (31%)
Frame = +1
Query: 82 HGHAVSSQSIVRHDKPFHQATAHYTPVLSYAAPVLTHAAPLIQHAGPIVHAAPVEHSSYI 261
HGH H + H+ S+ +P H H P H EH ++
Sbjct: 468 HGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPA-HHGHHGEHHHAPAHHGHHGEHGTH- 525
Query: 262 HASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQH 438
H H +P H HH H H H+PA + + E H H H
Sbjct: 526 HGHHGEHHHAPAHHG---HHGEH--GTHHGHHGSHHSPAHH--GHHGEHHHAPAHHGHH 577
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 33.9 bits (74), Expect = 0.11
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 100 SQSIVRHDKPFHQATAHYTPVLSYAAPVL-THAAPLIQHAGPIVHAAPVEHSSYIHASPV 276
+Q +V+ P QA+ PV+ P++Q A P+V AP A PV
Sbjct: 216 AQPVVQQAPPVQQASPKPVAQPVQQQPVVQAPPKPIVQQA-PVVQQAPPPKQQQAQAQPV 274
Query: 277 VQHFSPVQHAPVVHHAAIPI 336
Q P APVV A+ P+
Sbjct: 275 QQ---PPNPAPVVQQASAPV 291
Score = 33.5 bits (73), Expect = 0.15
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = +1
Query: 91 AVSSQSIVRHDKPFHQATAHYTPVLSYAAPVL---THAAPLIQHAGPIVHAAPVEHSSYI 261
A + Q V P Q PV A P A P++Q A P+ A+P + +
Sbjct: 179 APTQQPPVVQQTPPPQQPVVQAPVAQQAPPSQPQQAQAQPVVQQAPPVQQASPKPVAQPV 238
Query: 262 HASPVVQHFSP--VQHAPVVHHAAIP 333
PVVQ VQ APVV A P
Sbjct: 239 QQQPVVQAPPKPIVQQAPVVQQAPPP 264
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 241 VEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 378
VE SSYIH+S +QH H P + ++H H P+
Sbjct: 87 VESSSYIHSSQQIQHPPQQHHPPPPSPPPVAETIQHQPHPSQQQPS 132
>AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical
protein F54E2.2 protein.
Length = 174
Score = 31.1 bits (67), Expect = 0.79
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 323 AWCTTGACCTGLKCWTTGEACIYEEC 246
+WCTT C G KC TG C Y C
Sbjct: 150 SWCTTDQDCKGKKCCPTG--CDYNVC 173
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +1
Query: 133 HQATAHYTPVLSYAAPVLTHAAPLIQHA--GPIVHAAPVEHSSYIHASPVVQHFSPVQHA 306
H T P SY AP A + QH+ G + A P S + H + F+P A
Sbjct: 1226 HAPTPPPQPHPSYQAPAPPPALSVFQHSPQGAPITAPPPASSHHEHIAAPQARFTPTPGA 1285
Query: 307 PVVHHA 324
P HA
Sbjct: 1286 PSPWHA 1291
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +1
Query: 133 HQATAHYTPVLSYAAPVLTHAAPLIQHA--GPIVHAAPVEHSSYIHASPVVQHFSPVQHA 306
H T P SY AP A + QH+ G + A P S + H + F+P A
Sbjct: 1246 HAPTPPPQPHPSYQAPAPPPALSVFQHSPQGAPITAPPPASSHHEHIAAPQARFTPTPGA 1305
Query: 307 PVVHHA 324
P HA
Sbjct: 1306 PSPWHA 1311
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/79 (30%), Positives = 29/79 (36%)
Frame = +2
Query: 215 PVLLFTPPPWNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLPRSMSSH 394
P L PP W R+ S TS N TT PS TP+ ++ P S
Sbjct: 610 PTDLPPPPVWPAPNFDRRRKSSETSFTTN-----TTTNTLTPS-TPVTPPVLRPAFSESK 663
Query: 395 IPSRIPTPAITSPNTKPVM 451
P P T N KP +
Sbjct: 664 APQEPSKPVETKENNKPAL 682
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/79 (30%), Positives = 29/79 (36%)
Frame = +2
Query: 215 PVLLFTPPPWNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLPRSMSSH 394
P L PP W R+ S TS N TT PS TP+ ++ P S
Sbjct: 512 PTDLPPPPVWPAPNFDRRRKSSETSFTTN-----TTTNTLTPS-TPVTPPVLRPAFSESK 565
Query: 395 IPSRIPTPAITSPNTKPVM 451
P P T N KP +
Sbjct: 566 APQEPSKPVETKENNKPAL 584
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = -1
Query: 463 SRHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQ--G 290
S+HHHH + D+ +++ R H RE + D R+ + + R + +
Sbjct: 114 SKHHHHHHKKERKDKEHKKHKKD-REHRDREKERERDERKERERQQKEKEREDAARREIE 172
Query: 289 *SVGLLAKHVYTKNVPRGRREQ*DRHVESKGLRESVLEQHNSK 161
+ AK V + R R+E+ R E K +E + E+ S+
Sbjct: 173 EKAEMDAKRVAEEEEER-RKEKEKRREEKKKQKELLKEKERSE 214
>AF017746-1|AAD01632.1| 1198|Caenorhabditis elegans ladder protein
protein.
Length = 1198
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = -1
Query: 385 HTSREHDLRHDRSVRRQLESQRGARLEHVAQG*SVGLLAKHVYTKNVPRGRREQ*DRHVE 206
H+S+ R D + L +++ L+ +AQG V+ +P G+REQ D+ +
Sbjct: 27 HSSKSFRNRRDNDLLDWLTAEQKVSLKDIAQGTEEFKKKVAVFYNELPSGKREQRDKFYK 86
Query: 205 SKGLR 191
+ L+
Sbjct: 87 THCLQ 91
>U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related
family protein 2 protein.
Length = 933
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 438 VLGLVIAGVGILDGI*ELILRGSMIFDMIGV 346
+LG+V AG+ IL G+ L L G D++GV
Sbjct: 304 ILGVVSAGIAILTGVGFLSLMGMPYNDIVGV 334
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 229 HAAPVEHSSYIHASPVVQHFSPVQHAPV-VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 405
H V +S + S V SP+ P +H+ + I + + H+ H +E V
Sbjct: 322 HDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLSTHRITLHEGVTGVG 381
Query: 406 DPHTGDHKSQHET-RDGDVVKGEYSLL 483
+ SQH DG ++G ++ +
Sbjct: 382 SDSQMSNFSQHNIYLDGPDIRGRHAAI 408
>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
protein W03F11.6e protein.
Length = 1039
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 229 HAAPVEHSSYIHASPVVQHFSPVQHAPV-VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 405
H V +S + S V SP+ P +H+ + I + + H+ H +E V
Sbjct: 320 HDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLSTHRITLHEGVTEVG 379
Query: 406 DPHTGDHKSQHET-RDGDVVKGEYSLL 483
+ SQH DG ++G ++ +
Sbjct: 380 SDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 229 HAAPVEHSSYIHASPVVQHFSPVQHAPV-VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 405
H V +S + S V SP+ P +H+ + I + + H+ H +E V
Sbjct: 320 HDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLSTHRITLHEGVTEVG 379
Query: 406 DPHTGDHKSQHET-RDGDVVKGEYSLL 483
+ SQH DG ++G ++ +
Sbjct: 380 SDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 229 HAAPVEHSSYIHASPVVQHFSPVQHAPV-VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 405
H V +S + S V SP+ P +H+ + I + + H+ H +E V
Sbjct: 320 HDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLSTHRITLHEGVTEVG 379
Query: 406 DPHTGDHKSQHET-RDGDVVKGEYSLL 483
+ SQH DG ++G ++ +
Sbjct: 380 SDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 229 HAAPVEHSSYIHASPVVQHFSPVQHAPV-VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVE 405
H V +S + S V SP+ P +H+ + I + + H+ H +E V
Sbjct: 320 HDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHNLPVLIVMNNDGHLSTHRITLHEGVTEVG 379
Query: 406 DPHTGDHKSQHET-RDGDVVKGEYSLL 483
+ SQH DG ++G ++ +
Sbjct: 380 SDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 460 RHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQR 320
RH HHG R G R G RRN S D D+ R+Q+ ++
Sbjct: 85 RHGHHG-RHGM-GRHGGHGRRNKSGSDSDSSDSSEDKKKRKQMRDKK 129
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = -1
Query: 484 GVESIRLSRHHHHGFRVGTC--DRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGAR 311
G + R + HHH R D R D R R H + R DR R S+R R
Sbjct: 271 GADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHREHREHKEHRRDDR--HRSERSERSER 328
Query: 310 LE 305
E
Sbjct: 329 SE 330
>Z81464-7|CAB03857.2| 338|Caenorhabditis elegans Hypothetical
protein C08E8.2 protein.
Length = 338
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = -1
Query: 388 THTSREHDLRHDRSVRRQLESQRGARLEH--VAQG*SVGLLAKHVYTKN 248
TH+S HD RH ++ LE Q R+ H ++ G +V +LAK++Y N
Sbjct: 139 THSSIRHDCRHFFNL--VLEHQGDGRILHLKISTG-TVKVLAKNLYFPN 184
>Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical
protein T06E4.10 protein.
Length = 180
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +1
Query: 157 PVLSYAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPI 336
PV++ AAP A A P++ AAP ++ I+ PV +P AP AA+P
Sbjct: 100 PVVA-AAPAFAPAYAPAPVASPMIAAAPALAAASINGLPVAA--APA-FAPAFAPAAVPA 155
Query: 337 AV 342
AV
Sbjct: 156 AV 157
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 157 PVLSYAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPI 336
P + APVL APL+ P V AAP + +PV +PV P +A P+
Sbjct: 101 PFFASPAPVLAAPAPLLAPPAP-VFAAPRPVFAAPALAPVAP-MAPVLRGPAFAYAPSPV 158
>Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical
protein R01E6.5 protein.
Length = 245
Score = 27.5 bits (58), Expect = 9.8
Identities = 24/70 (34%), Positives = 32/70 (45%)
Frame = +1
Query: 232 AAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDP 411
A+P+ HSS+ +AS + QH H A EHS H AK E YS +D
Sbjct: 2 ASPISHSSHENASGKYGYGDESQHGKNFHQKA-----EHSGH-----EAK-EKGYS-QDG 49
Query: 412 HTGDHKSQHE 441
DH + H+
Sbjct: 50 KAADHDALHK 59
>AL033508-3|CAA22054.1| 315|Caenorhabditis elegans Hypothetical
protein Y106G6G.4 protein.
Length = 315
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1
Query: 334 LESQRGARLEHVAQG*SVGLLAKHVYTKNVPRGRREQ*DRHVESKGLR-ESVLEQHNSKL 158
LES R R++ S G+ K VP R + D HV++ G + + ++ NSK
Sbjct: 53 LESNRPPRMDLNNLSFSDGVNPKRSEQSVVPISRSSESDEHVQNNGAKNKKKYKRKNSKF 112
Query: 157 G 155
G
Sbjct: 113 G 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,927,762
Number of Sequences: 27780
Number of extensions: 398145
Number of successful extensions: 1404
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -